Experiment: 2'-Deoxycytidine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS19140 and BWI76_RS19145 are separated by 280 nucleotides BWI76_RS19145 and BWI76_RS19150 overlap by 4 nucleotides BWI76_RS19150 and BWI76_RS19155 are separated by 12 nucleotides
BWI76_RS19140: BWI76_RS19140 - citrate (Si)-synthase, at 3,979,437 to 3,980,723
_RS19140
BWI76_RS19145: BWI76_RS19145 - formate dehydrogenase cytochrome b556 subunit, at 3,981,004 to 3,981,633
_RS19145
BWI76_RS19150: BWI76_RS19150 - formate dehydrogenase subunit beta, at 3,981,630 to 3,982,532
_RS19150
BWI76_RS19155: BWI76_RS19155 - formate dehydrogenase-N subunit alpha, at 3,982,545 to 3,985,595
_RS19155
Position (kb)
3981
3982
3983 Strain fitness (log2 ratio)
-1
0
1 at 3980.662 kb on + strand at 3981.070 kb on - strand, within BWI76_RS19145 at 3982.721 kb on + strand at 3982.783 kb on - strand at 3982.820 kb on - strand at 3982.962 kb on + strand, within BWI76_RS19155 at 3983.019 kb on - strand, within BWI76_RS19155 at 3983.094 kb on + strand, within BWI76_RS19155 at 3983.174 kb on - strand, within BWI76_RS19155 at 3983.307 kb on + strand, within BWI76_RS19155 at 3983.410 kb on + strand, within BWI76_RS19155 at 3983.489 kb on + strand, within BWI76_RS19155 at 3983.497 kb on - strand, within BWI76_RS19155
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxycytidine 5 mM (C) remove 3,980,662 + -0.2 3,981,070 - BWI76_RS19145 0.10 +0.2 3,982,721 + +0.5 3,982,783 - -0.1 3,982,820 - +0.3 3,982,962 + BWI76_RS19155 0.14 -0.2 3,983,019 - BWI76_RS19155 0.16 +0.6 3,983,094 + BWI76_RS19155 0.18 +0.2 3,983,174 - BWI76_RS19155 0.21 -0.0 3,983,307 + BWI76_RS19155 0.25 -0.5 3,983,410 + BWI76_RS19155 0.28 -0.1 3,983,489 + BWI76_RS19155 0.31 -0.8 3,983,497 - BWI76_RS19155 0.31 -0.1
Or see this region's nucleotide sequence