Experiment: 2'-Deoxycytidine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS12675 and BWI76_RS12680 are separated by 47 nucleotides BWI76_RS12680 and BWI76_RS12685 are separated by 16 nucleotides
BWI76_RS12675: BWI76_RS12675 - putative UV protection and mutation protein, at 2,642,047 to 2,643,312
_RS12675
BWI76_RS12680: BWI76_RS12680 - oxidoreductase, at 2,643,360 to 2,644,427
_RS12680
BWI76_RS12685: BWI76_RS12685 - DeoR family transcriptional regulator, at 2,644,444 to 2,645,187
_RS12685
Position (kb)
2643
2644
2645 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2642.454 kb on + strand, within BWI76_RS12675 at 2642.489 kb on - strand, within BWI76_RS12675 at 2642.650 kb on + strand, within BWI76_RS12675 at 2642.739 kb on + strand, within BWI76_RS12675 at 2642.744 kb on + strand, within BWI76_RS12675 at 2642.760 kb on + strand, within BWI76_RS12675 at 2642.930 kb on - strand, within BWI76_RS12675 at 2643.057 kb on - strand, within BWI76_RS12675 at 2643.131 kb on + strand, within BWI76_RS12675 at 2643.212 kb on - strand at 2643.232 kb on - strand at 2643.366 kb on - strand at 2643.645 kb on + strand, within BWI76_RS12680 at 2643.766 kb on + strand, within BWI76_RS12680 at 2644.397 kb on + strand at 2644.521 kb on - strand, within BWI76_RS12685 at 2645.307 kb on + strand at 2645.348 kb on + strand at 2645.362 kb on + strand at 2645.362 kb on - strand at 2645.370 kb on - strand at 2645.370 kb on - strand at 2645.370 kb on - strand at 2645.386 kb on + strand at 2645.394 kb on - strand at 2645.394 kb on - strand at 2645.394 kb on - strand at 2645.394 kb on - strand at 2645.394 kb on - strand at 2645.394 kb on - strand at 2645.394 kb on - strand at 2645.394 kb on - strand at 2645.404 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxycytidine 5 mM (C) remove 2,642,454 + BWI76_RS12675 0.32 +0.2 2,642,489 - BWI76_RS12675 0.35 -1.2 2,642,650 + BWI76_RS12675 0.48 +0.2 2,642,739 + BWI76_RS12675 0.55 +0.2 2,642,744 + BWI76_RS12675 0.55 +0.2 2,642,760 + BWI76_RS12675 0.56 -0.7 2,642,930 - BWI76_RS12675 0.70 -0.5 2,643,057 - BWI76_RS12675 0.80 -0.7 2,643,131 + BWI76_RS12675 0.86 -0.0 2,643,212 - -0.3 2,643,232 - -1.7 2,643,366 - -0.2 2,643,645 + BWI76_RS12680 0.27 +1.3 2,643,766 + BWI76_RS12680 0.38 +0.8 2,644,397 + -0.6 2,644,521 - BWI76_RS12685 0.10 +0.5 2,645,307 + -1.3 2,645,348 + -0.8 2,645,362 + +0.4 2,645,362 - -2.1 2,645,370 - -0.0 2,645,370 - -0.5 2,645,370 - +1.5 2,645,386 + +1.1 2,645,394 - +0.7 2,645,394 - -0.6 2,645,394 - -0.2 2,645,394 - -0.1 2,645,394 - +2.2 2,645,394 - -2.4 2,645,394 - -1.5 2,645,394 - +0.7 2,645,404 - -0.5
Or see this region's nucleotide sequence