Experiment: 2'-Deoxycytidine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS04620 and BWI76_RS04625 are separated by 87 nucleotides BWI76_RS04625 and BWI76_RS04630 are separated by 231 nucleotides
BWI76_RS04620: BWI76_RS04620 - transcriptional regulator SgrR, at 961,923 to 963,578
_RS04620
BWI76_RS04625: BWI76_RS04625 - glucose uptake inhibitor SgrT, at 963,666 to 963,818
_RS04625
BWI76_RS04630: BWI76_RS04630 - sugar efflux transporter SetB, at 964,050 to 965,234
_RS04630
Position (kb) 963
964 Strain fitness (log2 ratio) -2
-1
0
1
2 at 962.759 kb on + strand, within BWI76_RS04620 at 962.761 kb on + strand, within BWI76_RS04620 at 962.837 kb on - strand, within BWI76_RS04620 at 962.885 kb on + strand, within BWI76_RS04620 at 962.885 kb on + strand, within BWI76_RS04620 at 963.194 kb on + strand, within BWI76_RS04620 at 963.230 kb on + strand, within BWI76_RS04620 at 963.364 kb on + strand, within BWI76_RS04620 at 963.364 kb on + strand, within BWI76_RS04620 at 963.397 kb on + strand, within BWI76_RS04620 at 963.774 kb on + strand, within BWI76_RS04625 at 963.785 kb on + strand, within BWI76_RS04625 at 963.805 kb on + strand at 963.805 kb on + strand at 963.813 kb on - strand at 963.827 kb on + strand at 963.827 kb on + strand at 963.827 kb on + strand at 963.975 kb on + strand at 963.975 kb on + strand at 963.975 kb on + strand at 964.159 kb on + strand at 964.203 kb on + strand, within BWI76_RS04630 at 964.208 kb on + strand, within BWI76_RS04630 at 964.246 kb on + strand, within BWI76_RS04630 at 964.263 kb on + strand, within BWI76_RS04630 at 964.365 kb on - strand, within BWI76_RS04630 at 964.365 kb on - strand, within BWI76_RS04630 at 964.386 kb on - strand, within BWI76_RS04630 at 964.386 kb on - strand, within BWI76_RS04630 at 964.464 kb on + strand, within BWI76_RS04630 at 964.496 kb on + strand, within BWI76_RS04630 at 964.524 kb on + strand, within BWI76_RS04630 at 964.593 kb on + strand, within BWI76_RS04630 at 964.595 kb on + strand, within BWI76_RS04630 at 964.600 kb on + strand, within BWI76_RS04630 at 964.658 kb on - strand, within BWI76_RS04630 at 964.807 kb on + strand, within BWI76_RS04630
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxycytidine 5 mM (C) remove 962,759 + BWI76_RS04620 0.50 +0.7 962,761 + BWI76_RS04620 0.51 +0.1 962,837 - BWI76_RS04620 0.55 -0.9 962,885 + BWI76_RS04620 0.58 -0.3 962,885 + BWI76_RS04620 0.58 -0.2 963,194 + BWI76_RS04620 0.77 +0.3 963,230 + BWI76_RS04620 0.79 +0.9 963,364 + BWI76_RS04620 0.87 +0.4 963,364 + BWI76_RS04620 0.87 +0.1 963,397 + BWI76_RS04620 0.89 -0.2 963,774 + BWI76_RS04625 0.71 -2.0 963,785 + BWI76_RS04625 0.78 -0.2 963,805 + +1.4 963,805 + +0.0 963,813 - +0.1 963,827 + +0.3 963,827 + +0.0 963,827 + +0.8 963,975 + +0.3 963,975 + +0.2 963,975 + -0.7 964,159 + -0.2 964,203 + BWI76_RS04630 0.13 +0.6 964,208 + BWI76_RS04630 0.13 -0.1 964,246 + BWI76_RS04630 0.17 +2.0 964,263 + BWI76_RS04630 0.18 +0.5 964,365 - BWI76_RS04630 0.27 +0.3 964,365 - BWI76_RS04630 0.27 -0.2 964,386 - BWI76_RS04630 0.28 +0.8 964,386 - BWI76_RS04630 0.28 -0.1 964,464 + BWI76_RS04630 0.35 +0.5 964,496 + BWI76_RS04630 0.38 +1.5 964,524 + BWI76_RS04630 0.40 +0.4 964,593 + BWI76_RS04630 0.46 -0.1 964,595 + BWI76_RS04630 0.46 -0.1 964,600 + BWI76_RS04630 0.46 -0.3 964,658 - BWI76_RS04630 0.51 +0.2 964,807 + BWI76_RS04630 0.64 +0.4
Or see this region's nucleotide sequence