Experiment: KB with 2',5'-Dihydroxy-4-Methoxychalcone 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4903 and Psyr_4904 overlap by 4 nucleotides Psyr_4904 and Psyr_4905 are separated by 93 nucleotides Psyr_4905 and Psyr_4906 are separated by 202 nucleotides Psyr_4906 and Psyr_4907 are separated by 312 nucleotides
Psyr_4903: Psyr_4903 - hypothetical protein, at 5,816,911 to 5,818,032
_4903
Psyr_4904: Psyr_4904 - hypothetical protein, at 5,818,029 to 5,818,400
_4904
Psyr_4905: Psyr_4905 - conserved hypothetical protein, at 5,818,494 to 5,818,727
_4905
Psyr_4906: Psyr_4906 - lipoprotein, putative, at 5,818,930 to 5,819,208
_4906
Psyr_4907: Psyr_4907 - PAS, at 5,819,521 to 5,820,867
_4907
Position (kb) 5818
5819 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 5817.530 kb on + strand, within Psyr_4903 at 5817.530 kb on + strand, within Psyr_4903 at 5817.530 kb on + strand, within Psyr_4903 at 5817.530 kb on + strand, within Psyr_4903 at 5817.530 kb on + strand, within Psyr_4903 at 5817.530 kb on + strand, within Psyr_4903 at 5817.530 kb on + strand, within Psyr_4903 at 5817.530 kb on + strand, within Psyr_4903 at 5817.530 kb on + strand, within Psyr_4903 at 5817.530 kb on + strand, within Psyr_4903 at 5817.530 kb on + strand, within Psyr_4903 at 5817.530 kb on + strand, within Psyr_4903 at 5817.530 kb on + strand, within Psyr_4903 at 5817.530 kb on + strand, within Psyr_4903 at 5817.531 kb on - strand, within Psyr_4903 at 5817.531 kb on - strand, within Psyr_4903 at 5817.531 kb on - strand, within Psyr_4903 at 5817.531 kb on - strand, within Psyr_4903 at 5817.531 kb on - strand, within Psyr_4903 at 5817.531 kb on - strand, within Psyr_4903 at 5817.531 kb on - strand, within Psyr_4903 at 5817.531 kb on - strand, within Psyr_4903 at 5817.531 kb on - strand, within Psyr_4903 at 5817.531 kb on - strand, within Psyr_4903 at 5817.531 kb on - strand, within Psyr_4903 at 5817.531 kb on - strand, within Psyr_4903 at 5817.531 kb on - strand, within Psyr_4903 at 5817.531 kb on - strand, within Psyr_4903 at 5817.531 kb on - strand, within Psyr_4903 at 5817.531 kb on - strand, within Psyr_4903 at 5817.531 kb on - strand, within Psyr_4903 at 5817.642 kb on + strand, within Psyr_4903 at 5817.669 kb on + strand, within Psyr_4903 at 5817.669 kb on + strand, within Psyr_4903 at 5817.669 kb on + strand, within Psyr_4903 at 5817.669 kb on + strand, within Psyr_4903 at 5817.669 kb on + strand, within Psyr_4903 at 5817.670 kb on - strand, within Psyr_4903 at 5817.670 kb on - strand, within Psyr_4903 at 5817.670 kb on - strand, within Psyr_4903 at 5817.680 kb on + strand, within Psyr_4903 at 5817.768 kb on - strand, within Psyr_4903 at 5817.787 kb on + strand, within Psyr_4903 at 5817.788 kb on - strand, within Psyr_4903 at 5817.790 kb on + strand, within Psyr_4903 at 5817.798 kb on + strand, within Psyr_4903 at 5817.798 kb on + strand, within Psyr_4903 at 5817.799 kb on - strand, within Psyr_4903 at 5817.816 kb on + strand, within Psyr_4903 at 5817.816 kb on + strand, within Psyr_4903 at 5817.816 kb on + strand, within Psyr_4903 at 5817.816 kb on + strand, within Psyr_4903 at 5817.816 kb on + strand, within Psyr_4903 at 5817.816 kb on + strand, within Psyr_4903 at 5817.816 kb on + strand, within Psyr_4903 at 5817.816 kb on + strand, within Psyr_4903 at 5817.816 kb on + strand, within Psyr_4903 at 5817.816 kb on + strand, within Psyr_4903 at 5817.817 kb on - strand, within Psyr_4903 at 5817.817 kb on - strand, within Psyr_4903 at 5817.817 kb on - strand, within Psyr_4903 at 5817.817 kb on - strand, within Psyr_4903 at 5817.817 kb on - strand, within Psyr_4903 at 5817.817 kb on - strand, within Psyr_4903 at 5817.820 kb on + strand, within Psyr_4903 at 5817.821 kb on - strand, within Psyr_4903 at 5817.821 kb on - strand, within Psyr_4903 at 5817.826 kb on - strand, within Psyr_4903 at 5817.914 kb on + strand, within Psyr_4903 at 5817.914 kb on + strand, within Psyr_4903 at 5817.914 kb on + strand, within Psyr_4903 at 5817.914 kb on + strand, within Psyr_4903 at 5817.914 kb on + strand, within Psyr_4903 at 5817.915 kb on - strand, within Psyr_4903 at 5817.915 kb on - strand, within Psyr_4903 at 5817.915 kb on - strand, within Psyr_4903 at 5817.915 kb on - strand, within Psyr_4903 at 5817.915 kb on - strand, within Psyr_4903 at 5817.915 kb on - strand, within Psyr_4903 at 5817.925 kb on - strand at 5817.925 kb on - strand at 5817.951 kb on + strand at 5817.993 kb on - strand at 5817.995 kb on + strand at 5817.995 kb on + strand at 5817.995 kb on + strand at 5818.070 kb on + strand, within Psyr_4904 at 5818.070 kb on + strand, within Psyr_4904 at 5818.071 kb on - strand, within Psyr_4904 at 5818.071 kb on - strand, within Psyr_4904 at 5818.071 kb on - strand, within Psyr_4904 at 5818.105 kb on + strand, within Psyr_4904 at 5818.106 kb on - strand, within Psyr_4904 at 5818.106 kb on - strand, within Psyr_4904 at 5818.106 kb on - strand, within Psyr_4904 at 5818.146 kb on + strand, within Psyr_4904 at 5818.146 kb on + strand, within Psyr_4904 at 5818.147 kb on - strand, within Psyr_4904 at 5818.164 kb on - strand, within Psyr_4904 at 5818.179 kb on + strand, within Psyr_4904 at 5818.180 kb on - strand, within Psyr_4904 at 5818.229 kb on + strand, within Psyr_4904 at 5818.229 kb on + strand, within Psyr_4904 at 5818.389 kb on + strand at 5818.389 kb on + strand at 5818.389 kb on + strand at 5818.389 kb on + strand at 5818.389 kb on + strand at 5818.390 kb on - strand at 5818.390 kb on - strand at 5818.390 kb on - strand at 5818.390 kb on - strand at 5818.390 kb on - strand at 5818.390 kb on - strand at 5818.390 kb on - strand at 5818.390 kb on - strand at 5818.390 kb on - strand at 5818.391 kb on + strand at 5818.391 kb on + strand at 5818.391 kb on + strand at 5818.392 kb on - strand at 5818.392 kb on - strand at 5818.392 kb on - strand at 5818.399 kb on - strand at 5818.403 kb on + strand at 5818.404 kb on - strand at 5818.439 kb on - strand at 5818.439 kb on - strand at 5818.451 kb on + strand at 5818.451 kb on + strand at 5818.451 kb on + strand at 5818.451 kb on + strand at 5818.451 kb on + strand at 5818.451 kb on + strand at 5818.451 kb on + strand at 5818.451 kb on + strand at 5818.451 kb on + strand at 5818.451 kb on + strand at 5818.451 kb on + strand at 5818.451 kb on + strand at 5818.451 kb on + strand at 5818.451 kb on + strand at 5818.451 kb on + strand at 5818.451 kb on + strand at 5818.451 kb on + strand at 5818.451 kb on + strand at 5818.452 kb on - strand at 5818.452 kb on - strand at 5818.452 kb on - strand at 5818.452 kb on - strand at 5818.452 kb on - strand at 5818.452 kb on - strand at 5818.452 kb on - strand at 5818.452 kb on - strand at 5818.452 kb on - strand at 5818.452 kb on - strand at 5818.452 kb on - strand at 5818.452 kb on - strand at 5818.452 kb on - strand at 5818.452 kb on - strand at 5818.452 kb on - strand at 5818.452 kb on - strand at 5818.452 kb on - strand at 5818.452 kb on - strand at 5818.452 kb on - strand at 5818.452 kb on - strand at 5818.452 kb on - strand at 5818.452 kb on - strand at 5818.452 kb on - strand at 5818.452 kb on - strand at 5818.452 kb on - strand at 5818.452 kb on - strand at 5818.452 kb on - strand at 5818.487 kb on + strand at 5818.487 kb on + strand at 5818.487 kb on + strand at 5818.487 kb on + strand at 5818.487 kb on + strand at 5818.487 kb on + strand at 5818.487 kb on + strand at 5818.488 kb on - strand at 5818.488 kb on - strand at 5818.488 kb on - strand at 5818.488 kb on - strand at 5818.491 kb on + strand at 5818.491 kb on + strand at 5818.491 kb on + strand at 5818.491 kb on + strand at 5818.492 kb on - strand at 5818.492 kb on - strand at 5818.492 kb on - strand at 5818.492 kb on - strand at 5818.492 kb on - strand at 5818.640 kb on + strand, within Psyr_4905 at 5818.640 kb on + strand, within Psyr_4905 at 5818.641 kb on - strand, within Psyr_4905 at 5818.641 kb on - strand, within Psyr_4905 at 5818.641 kb on - strand, within Psyr_4905 at 5818.641 kb on - strand, within Psyr_4905 at 5818.660 kb on + strand, within Psyr_4905 at 5818.660 kb on + strand, within Psyr_4905 at 5818.660 kb on + strand, within Psyr_4905 at 5818.660 kb on + strand, within Psyr_4905 at 5818.660 kb on + strand, within Psyr_4905 at 5818.661 kb on - strand, within Psyr_4905 at 5818.661 kb on - strand, within Psyr_4905 at 5818.661 kb on - strand, within Psyr_4905 at 5818.668 kb on + strand, within Psyr_4905 at 5818.668 kb on + strand, within Psyr_4905 at 5818.727 kb on + strand at 5818.727 kb on + strand at 5818.727 kb on + strand at 5818.727 kb on + strand at 5818.875 kb on + strand at 5818.876 kb on - strand at 5818.876 kb on - strand at 5818.903 kb on + strand at 5818.904 kb on - strand at 5818.904 kb on - strand at 5818.904 kb on - strand at 5818.940 kb on + strand at 5818.941 kb on - strand at 5818.941 kb on - strand at 5818.941 kb on - strand at 5818.941 kb on - strand at 5818.941 kb on - strand at 5818.941 kb on - strand at 5819.255 kb on + strand at 5819.255 kb on + strand at 5819.255 kb on + strand at 5819.425 kb on + strand at 5819.426 kb on - strand at 5819.426 kb on - strand at 5819.426 kb on - strand at 5819.429 kb on + strand at 5819.430 kb on - strand at 5819.432 kb on - strand at 5819.432 kb on - strand at 5819.438 kb on - strand at 5819.491 kb on + strand at 5819.491 kb on + strand at 5819.491 kb on + strand at 5819.492 kb on - strand at 5819.492 kb on - strand at 5819.520 kb on + strand at 5819.520 kb on + strand at 5819.520 kb on + strand at 5819.521 kb on - strand at 5819.532 kb on + strand at 5819.532 kb on + strand at 5819.532 kb on + strand at 5819.532 kb on + strand at 5819.533 kb on - strand at 5819.570 kb on + strand at 5819.570 kb on + strand at 5819.570 kb on + strand at 5819.570 kb on + strand at 5819.570 kb on + strand at 5819.571 kb on - strand at 5819.571 kb on - strand at 5819.571 kb on - strand at 5819.571 kb on - strand at 5819.662 kb on - strand, within Psyr_4907
Per-strain Table
Position Strand Gene LocusTag Fraction KB with 2',5'-Dihydroxy-4-Methoxychalcone 10 mM remove 5,817,530 + Psyr_4903 0.55 -0.2 5,817,530 + Psyr_4903 0.55 -0.6 5,817,530 + Psyr_4903 0.55 -0.0 5,817,530 + Psyr_4903 0.55 -1.5 5,817,530 + Psyr_4903 0.55 +0.1 5,817,530 + Psyr_4903 0.55 -0.3 5,817,530 + Psyr_4903 0.55 +0.1 5,817,530 + Psyr_4903 0.55 -0.1 5,817,530 + Psyr_4903 0.55 +0.4 5,817,530 + Psyr_4903 0.55 +0.6 5,817,530 + Psyr_4903 0.55 -0.2 5,817,530 + Psyr_4903 0.55 -2.0 5,817,530 + Psyr_4903 0.55 -0.2 5,817,530 + Psyr_4903 0.55 -0.3 5,817,531 - Psyr_4903 0.55 +1.0 5,817,531 - Psyr_4903 0.55 -2.4 5,817,531 - Psyr_4903 0.55 -0.1 5,817,531 - Psyr_4903 0.55 -1.0 5,817,531 - Psyr_4903 0.55 -1.3 5,817,531 - Psyr_4903 0.55 -0.7 5,817,531 - Psyr_4903 0.55 -0.3 5,817,531 - Psyr_4903 0.55 -0.9 5,817,531 - Psyr_4903 0.55 +0.3 5,817,531 - Psyr_4903 0.55 -1.4 5,817,531 - Psyr_4903 0.55 -0.3 5,817,531 - Psyr_4903 0.55 +0.2 5,817,531 - Psyr_4903 0.55 +1.9 5,817,531 - Psyr_4903 0.55 +0.3 5,817,531 - Psyr_4903 0.55 -0.9 5,817,531 - Psyr_4903 0.55 +0.0 5,817,531 - Psyr_4903 0.55 +0.1 5,817,642 + Psyr_4903 0.65 -0.5 5,817,669 + Psyr_4903 0.68 +0.7 5,817,669 + Psyr_4903 0.68 +0.0 5,817,669 + Psyr_4903 0.68 +0.2 5,817,669 + Psyr_4903 0.68 +0.7 5,817,669 + Psyr_4903 0.68 -1.4 5,817,670 - Psyr_4903 0.68 +0.2 5,817,670 - Psyr_4903 0.68 -0.0 5,817,670 - Psyr_4903 0.68 +0.3 5,817,680 + Psyr_4903 0.69 +0.5 5,817,768 - Psyr_4903 0.76 -0.1 5,817,787 + Psyr_4903 0.78 +0.9 5,817,788 - Psyr_4903 0.78 +0.0 5,817,790 + Psyr_4903 0.78 -0.9 5,817,798 + Psyr_4903 0.79 +0.3 5,817,798 + Psyr_4903 0.79 +1.1 5,817,799 - Psyr_4903 0.79 -0.4 5,817,816 + Psyr_4903 0.81 +0.5 5,817,816 + Psyr_4903 0.81 +0.0 5,817,816 + Psyr_4903 0.81 +0.9 5,817,816 + Psyr_4903 0.81 -0.2 5,817,816 + Psyr_4903 0.81 -1.7 5,817,816 + Psyr_4903 0.81 -1.3 5,817,816 + Psyr_4903 0.81 +0.3 5,817,816 + Psyr_4903 0.81 -0.0 5,817,816 + Psyr_4903 0.81 -0.3 5,817,816 + Psyr_4903 0.81 +0.3 5,817,817 - Psyr_4903 0.81 +0.4 5,817,817 - Psyr_4903 0.81 +0.8 5,817,817 - Psyr_4903 0.81 -2.3 5,817,817 - Psyr_4903 0.81 -1.0 5,817,817 - Psyr_4903 0.81 -0.5 5,817,817 - Psyr_4903 0.81 -0.5 5,817,820 + Psyr_4903 0.81 +1.1 5,817,821 - Psyr_4903 0.81 +0.5 5,817,821 - Psyr_4903 0.81 -0.6 5,817,826 - Psyr_4903 0.82 -0.8 5,817,914 + Psyr_4903 0.89 +1.7 5,817,914 + Psyr_4903 0.89 -0.1 5,817,914 + Psyr_4903 0.89 +0.6 5,817,914 + Psyr_4903 0.89 +0.1 5,817,914 + Psyr_4903 0.89 -0.0 5,817,915 - Psyr_4903 0.89 -0.5 5,817,915 - Psyr_4903 0.89 +1.3 5,817,915 - Psyr_4903 0.89 -0.3 5,817,915 - Psyr_4903 0.89 -0.0 5,817,915 - Psyr_4903 0.89 +0.3 5,817,915 - Psyr_4903 0.89 +0.6 5,817,925 - +0.0 5,817,925 - -2.4 5,817,951 + -1.1 5,817,993 - +0.1 5,817,995 + -0.1 5,817,995 + +0.2 5,817,995 + -0.1 5,818,070 + Psyr_4904 0.11 -0.4 5,818,070 + Psyr_4904 0.11 -2.5 5,818,071 - Psyr_4904 0.11 +0.3 5,818,071 - Psyr_4904 0.11 -1.3 5,818,071 - Psyr_4904 0.11 -0.3 5,818,105 + Psyr_4904 0.20 +0.1 5,818,106 - Psyr_4904 0.21 +1.3 5,818,106 - Psyr_4904 0.21 +2.3 5,818,106 - Psyr_4904 0.21 +0.9 5,818,146 + Psyr_4904 0.31 +1.1 5,818,146 + Psyr_4904 0.31 -0.5 5,818,147 - Psyr_4904 0.32 +0.5 5,818,164 - Psyr_4904 0.36 +0.8 5,818,179 + Psyr_4904 0.40 -0.3 5,818,180 - Psyr_4904 0.41 -1.0 5,818,229 + Psyr_4904 0.54 -1.0 5,818,229 + Psyr_4904 0.54 -2.6 5,818,389 + +0.2 5,818,389 + +0.0 5,818,389 + +0.1 5,818,389 + +0.3 5,818,389 + -0.5 5,818,390 - +0.2 5,818,390 - +0.3 5,818,390 - -0.2 5,818,390 - +0.0 5,818,390 - +0.7 5,818,390 - +1.4 5,818,390 - +0.4 5,818,390 - +1.3 5,818,390 - -1.5 5,818,391 + +0.8 5,818,391 + -1.0 5,818,391 + -0.4 5,818,392 - -2.0 5,818,392 - +0.3 5,818,392 - +0.7 5,818,399 - -0.3 5,818,403 + -0.3 5,818,404 - -0.5 5,818,439 - -0.2 5,818,439 - +0.6 5,818,451 + +0.2 5,818,451 + +0.1 5,818,451 + -0.4 5,818,451 + -0.3 5,818,451 + -0.0 5,818,451 + +1.3 5,818,451 + -0.1 5,818,451 + -1.1 5,818,451 + +0.8 5,818,451 + +0.3 5,818,451 + -0.0 5,818,451 + -0.9 5,818,451 + +0.8 5,818,451 + +0.1 5,818,451 + -0.4 5,818,451 + +1.1 5,818,451 + +0.3 5,818,451 + +0.3 5,818,452 - +3.9 5,818,452 - -0.5 5,818,452 - -0.7 5,818,452 - -0.3 5,818,452 - -0.3 5,818,452 - -0.7 5,818,452 - +1.3 5,818,452 - -0.7 5,818,452 - +0.2 5,818,452 - +0.8 5,818,452 - -1.1 5,818,452 - -3.2 5,818,452 - -1.0 5,818,452 - -0.9 5,818,452 - +0.5 5,818,452 - -0.7 5,818,452 - +0.0 5,818,452 - -0.2 5,818,452 - +0.6 5,818,452 - +1.9 5,818,452 - -0.9 5,818,452 - +0.1 5,818,452 - +1.1 5,818,452 - +0.3 5,818,452 - -0.8 5,818,452 - +1.1 5,818,452 - -0.9 5,818,487 + +0.6 5,818,487 + -1.4 5,818,487 + +0.5 5,818,487 + +0.4 5,818,487 + +1.1 5,818,487 + +0.2 5,818,487 + +0.9 5,818,488 - +0.9 5,818,488 - -0.2 5,818,488 - -1.0 5,818,488 - -0.0 5,818,491 + -0.1 5,818,491 + +1.9 5,818,491 + +0.1 5,818,491 + +1.9 5,818,492 - +0.1 5,818,492 - +0.9 5,818,492 - -0.4 5,818,492 - -1.1 5,818,492 - +1.0 5,818,640 + Psyr_4905 0.62 +0.5 5,818,640 + Psyr_4905 0.62 -0.1 5,818,641 - Psyr_4905 0.63 +0.1 5,818,641 - Psyr_4905 0.63 -0.3 5,818,641 - Psyr_4905 0.63 -0.1 5,818,641 - Psyr_4905 0.63 -1.6 5,818,660 + Psyr_4905 0.71 -1.7 5,818,660 + Psyr_4905 0.71 -0.7 5,818,660 + Psyr_4905 0.71 -0.1 5,818,660 + Psyr_4905 0.71 -0.2 5,818,660 + Psyr_4905 0.71 +0.6 5,818,661 - Psyr_4905 0.71 -0.3 5,818,661 - Psyr_4905 0.71 -0.7 5,818,661 - Psyr_4905 0.71 -1.3 5,818,668 + Psyr_4905 0.74 -0.3 5,818,668 + Psyr_4905 0.74 -1.3 5,818,727 + -0.4 5,818,727 + -0.7 5,818,727 + -0.8 5,818,727 + -1.1 5,818,875 + +0.5 5,818,876 - +0.1 5,818,876 - +1.3 5,818,903 + -0.8 5,818,904 - +1.1 5,818,904 - +0.2 5,818,904 - +1.0 5,818,940 + -0.3 5,818,941 - -0.7 5,818,941 - -0.2 5,818,941 - +0.5 5,818,941 - -1.1 5,818,941 - +0.6 5,818,941 - +1.3 5,819,255 + +0.4 5,819,255 + +0.3 5,819,255 + +0.3 5,819,425 + +1.0 5,819,426 - -0.6 5,819,426 - +0.7 5,819,426 - -0.1 5,819,429 + +0.0 5,819,430 - +0.2 5,819,432 - +1.6 5,819,432 - -1.3 5,819,438 - -0.4 5,819,491 + +0.6 5,819,491 + +0.6 5,819,491 + -0.6 5,819,492 - +0.3 5,819,492 - -0.8 5,819,520 + +0.8 5,819,520 + -0.1 5,819,520 + +0.1 5,819,521 - -0.3 5,819,532 + +0.1 5,819,532 + -1.0 5,819,532 + +0.2 5,819,532 + -0.1 5,819,533 - +0.7 5,819,570 + +0.7 5,819,570 + -0.1 5,819,570 + +0.5 5,819,570 + +0.8 5,819,570 + +0.2 5,819,571 - +0.4 5,819,571 - +0.0 5,819,571 - -0.2 5,819,571 - +0.7 5,819,662 - Psyr_4907 0.10 -0.0
Or see this region's nucleotide sequence