Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS08455

Experiment: p-Coumaric (C) and Ammonium chloride (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric (C) and Ammonium chloride (N); with TAPS
1,883,821	+				-0.7
1,883,821	+				-0.8
1,883,822	-				-1.4
1,883,822	-				+0.0
1,883,822	-				-1.5
1,883,822	-				-1.0
1,883,875	+		PFLU_RS08450	0.12	+1.5
1,883,875	+		PFLU_RS08450	0.12	+0.4
1,883,875	+		PFLU_RS08450	0.12	-1.1
1,883,875	+		PFLU_RS08450	0.12	-1.3
1,883,875	+		PFLU_RS08450	0.12	-0.3
1,883,875	+		PFLU_RS08450	0.12	-2.6
1,883,875	+		PFLU_RS08450	0.12	+0.5
1,883,875	+		PFLU_RS08450	0.12	+1.1
1,883,876	-		PFLU_RS08450	0.13	+0.3
1,883,876	-		PFLU_RS08450	0.13	-0.7
1,883,876	-		PFLU_RS08450	0.13	-0.3
1,883,876	-		PFLU_RS08450	0.13	-0.5
1,883,876	-		PFLU_RS08450	0.13	-1.0
1,883,876	-		PFLU_RS08450	0.13	-0.2
1,883,876	-		PFLU_RS08450	0.13	-2.5
1,883,876	-		PFLU_RS08450	0.13	-0.1
1,883,876	-		PFLU_RS08450	0.13	-2.8
1,883,876	-		PFLU_RS08450	0.13	-2.0
1,883,876	-		PFLU_RS08450	0.13	-1.3
1,883,947	+		PFLU_RS08450	0.20	-0.2
1,883,947	+		PFLU_RS08450	0.20	+1.4
1,883,948	-		PFLU_RS08450	0.20	+0.6
1,883,948	-		PFLU_RS08450	0.20	-1.4
1,883,948	-		PFLU_RS08450	0.20	+0.3
1,883,948	-		PFLU_RS08450	0.20	-1.0
1,883,948	-		PFLU_RS08450	0.20	+0.8
1,884,056	-		PFLU_RS08450	0.31	-1.0
1,884,248	+		PFLU_RS08450	0.52	-1.0
1,884,249	-		PFLU_RS08450	0.52	-1.4
1,884,346	+		PFLU_RS08450	0.62	+0.2
1,884,346	+		PFLU_RS08450	0.62	+0.0
1,884,346	+		PFLU_RS08450	0.62	-0.5
1,884,346	+		PFLU_RS08450	0.62	+0.4
1,884,347	-		PFLU_RS08450	0.62	+0.8
1,884,347	-		PFLU_RS08450	0.62	+0.0
1,884,660	+				-0.0
1,884,660	+				-0.7
1,884,660	+				+0.4
1,884,660	+				-0.0
1,884,660	+				-0.1
1,884,660	+				+1.0
1,884,660	+				-1.1
1,884,660	+				-1.2
1,884,660	+				-0.4
1,884,660	+				-1.5
1,884,660	+				+0.5
1,884,660	+				-0.8
1,884,660	+				-2.5
1,884,660	+				-3.2
1,884,660	+				+1.9
1,884,660	+				-0.3
1,884,660	+				+0.7
1,884,660	+				+0.3
1,884,660	+				-1.6
1,884,661	-				+1.7
1,884,661	-				+0.8
1,884,661	-				-0.7
1,884,661	-				+0.2
1,884,661	-				-1.5
1,884,661	-				-0.7
1,884,661	-				+0.5
1,884,661	-				-0.9
1,884,661	-				-1.3
1,884,661	-				+0.1
1,884,661	-				-0.8
1,884,661	-				+0.5
1,884,695	+				-0.9
1,884,720	+				-0.4
1,884,768	-				-0.5
1,884,781	+				-2.3
1,884,781	+				-1.9
1,884,781	+				-2.0
1,884,781	+				-1.8
1,884,781	+				-1.1
1,884,781	+				-1.7
1,884,781	+				-1.0
1,884,781	+				-1.3
1,884,781	+				-1.7
1,884,781	+				-1.3
1,884,781	+				+0.5
1,884,781	+				-2.9
1,884,781	+				-2.8
1,884,781	+				+0.1
1,884,781	+				-0.3
1,884,782	-				+0.7
1,884,782	-				-1.1
1,884,782	-				-1.5
1,884,782	-				+0.8
1,884,782	-				-0.8
1,884,782	-				+0.5
1,884,782	-				-0.5
1,884,782	-				-1.5
1,884,782	-				-1.0
1,884,782	-				+0.3
1,884,782	-				+0.8
1,884,782	-				-1.2
1,884,782	-				+0.1
1,884,782	-				+0.2
1,884,782	-				+1.2
1,884,782	-				-0.2
1,884,782	-				+0.9
1,884,782	-				-0.8
1,884,782	-				+1.3
1,884,828	-				+1.1
1,884,828	-				+0.6
1,884,828	-				+0.5
1,884,828	-				+0.2
1,884,828	-				+0.0
1,884,835	+				+0.1
1,884,835	+				+0.4
1,884,835	+				+0.8
1,884,835	+				-0.0
1,884,835	+				+1.3
1,884,835	+				+0.7
1,884,835	+				-0.2
1,884,835	+				-0.8
1,884,835	+				-1.4
1,884,835	+				-0.2
1,884,835	+				+0.7
1,884,835	+				-0.4
1,884,835	+				-0.9
1,884,835	+				-0.4
1,884,835	+				-0.2
1,884,835	+				-0.1
1,884,835	+				-2.8
1,884,835	+				-0.9
1,884,835	+				+0.1
1,884,835	+				-1.5
1,884,835	+				+1.3
1,884,835	+				+0.3
1,884,836	-				+0.8
1,884,836	-				+0.8
1,884,836	-				+0.3
1,884,836	-				+1.0
1,884,836	-				+0.3
1,884,836	-				+0.6
1,884,836	-				+2.7
1,884,836	-				+2.4
1,884,836	-				-0.2
1,884,836	-				+0.3
1,884,836	-				-0.8
1,884,836	-				+1.2
1,884,836	-				-0.8
1,884,836	-				-0.2
1,884,836	-				+0.1
1,884,836	-				-0.5
1,884,836	-				+1.6
1,884,836	-				-0.0
1,884,836	-				+0.4
1,884,836	-				+1.7
1,884,836	-				+0.1
1,884,836	-				-0.7
1,884,836	-				-1.7
1,884,875	+				+0.2
1,884,875	+				-0.7
1,884,875	+				+0.3
1,884,875	+				+0.8
1,884,876	-				+1.4
1,884,876	-				-0.1
1,884,876	-				-1.0
1,884,876	-				-0.2
1,884,899	+		PFLU_RS08455	0.11	-0.1
1,884,900	-		PFLU_RS08455	0.11	-1.3
1,884,900	-		PFLU_RS08455	0.11	+0.8
1,884,900	-		PFLU_RS08455	0.11	-1.2
1,884,900	-		PFLU_RS08455	0.11	+0.7
1,884,900	-		PFLU_RS08455	0.11	+0.4
1,885,129	-		PFLU_RS08455	0.42	-0.7
1,885,156	+		PFLU_RS08455	0.45	+1.6
1,885,156	+		PFLU_RS08455	0.45	-0.4
1,885,156	+		PFLU_RS08455	0.45	-1.5
1,885,156	+		PFLU_RS08455	0.45	+0.3
1,885,157	-		PFLU_RS08455	0.45	-0.4
1,885,157	-		PFLU_RS08455	0.45	+2.2
1,885,157	-		PFLU_RS08455	0.45	+0.2
1,885,211	-		PFLU_RS08455	0.53	+0.8
1,885,393	+		PFLU_RS08455	0.77	+0.3
1,885,393	+		PFLU_RS08455	0.77	+0.5
1,885,393	+		PFLU_RS08455	0.77	-0.2
1,885,393	+		PFLU_RS08455	0.77	-0.2
1,885,394	-		PFLU_RS08455	0.77	+0.7
1,885,394	-		PFLU_RS08455	0.77	-2.1
1,885,394	-		PFLU_RS08455	0.77	+2.2
1,885,394	-		PFLU_RS08455	0.77	-0.2
1,885,394	-		PFLU_RS08455	0.77	-1.0
1,885,394	-		PFLU_RS08455	0.77	-0.2
1,885,394	-		PFLU_RS08455	0.77	+0.8
1,885,394	-		PFLU_RS08455	0.77	-1.6
1,885,394	-		PFLU_RS08455	0.77	+1.2
1,885,394	-		PFLU_RS08455	0.77	+1.0
1,885,394	-		PFLU_RS08455	0.77	+0.3
1,885,394	-		PFLU_RS08455	0.77	-1.4
1,885,394	-		PFLU_RS08455	0.77	+0.2
1,885,431	-		PFLU_RS08455	0.82	+1.8
1,885,458	+		PFLU_RS08455	0.85	+0.4
1,885,458	+		PFLU_RS08455	0.85	-0.5
1,885,458	+		PFLU_RS08455	0.85	-1.8
1,885,459	-		PFLU_RS08455	0.86	+0.9
1,885,459	-		PFLU_RS08455	0.86	-1.3
1,885,502	+				-0.0
1,885,502	+				-0.9
1,885,503	-				-1.5
1,885,503	-				-1.7
1,885,558	-				+0.8
1,885,558	-				+1.3
1,885,581	+				-1.4
1,885,581	+				-1.4
1,885,581	+				-0.9
1,885,581	+				+0.4
1,885,581	+				-1.5
1,885,582	-				+4.0
1,885,582	-				-1.5
1,885,582	-				-0.5
1,885,582	-				-0.6
1,885,582	-				-1.1
1,885,582	-				-0.4
1,885,582	-				-1.2
1,885,582	-				+0.2
1,885,582	-				-1.0
1,885,582	-				+1.3
1,885,628	+				+1.0
1,885,629	-				-0.5
1,885,629	-				+0.6
1,885,629	-				+0.8
1,885,682	+		PFLU_RS08460	0.15	+0.4
1,885,768	+		PFLU_RS08460	0.25	+1.8
1,885,768	+		PFLU_RS08460	0.25	+0.2
1,885,769	-		PFLU_RS08460	0.25	-0.2
1,885,779	+		PFLU_RS08460	0.26	-2.1
1,885,928	-		PFLU_RS08460	0.44	+1.6
1,886,094	+		PFLU_RS08460	0.63	-1.7
1,886,094	+		PFLU_RS08460	0.63	+0.9
1,886,094	+		PFLU_RS08460	0.63	+1.6
1,886,094	+		PFLU_RS08460	0.63	-1.7
1,886,094	+		PFLU_RS08460	0.63	+0.2
1,886,095	-		PFLU_RS08460	0.63	-0.2
1,886,095	-		PFLU_RS08460	0.63	+0.5
1,886,095	-		PFLU_RS08460	0.63	-1.4
1,886,095	-		PFLU_RS08460	0.63	-0.7
1,886,095	-		PFLU_RS08460	0.63	-0.6
1,886,095	-		PFLU_RS08460	0.63	+0.5
1,886,095	-		PFLU_RS08460	0.63	+1.4
1,886,095	-		PFLU_RS08460	0.63	-0.9
1,886,201	+		PFLU_RS08460	0.75	-1.3
1,886,201	+		PFLU_RS08460	0.75	+1.0
1,886,201	+		PFLU_RS08460	0.75	+1.1
1,886,201	+		PFLU_RS08460	0.75	+0.6
1,886,201	+		PFLU_RS08460	0.75	+0.4
1,886,201	+		PFLU_RS08460	0.75	+0.7
1,886,202	-		PFLU_RS08460	0.76	-0.2
1,886,202	-		PFLU_RS08460	0.76	-2.1
1,886,202	-		PFLU_RS08460	0.76	-0.8
1,886,202	-		PFLU_RS08460	0.76	-0.1
1,886,202	-		PFLU_RS08460	0.76	-2.6
1,886,293	+		PFLU_RS08460	0.86	-0.9
1,886,293	+		PFLU_RS08460	0.86	+1.2
1,886,293	+		PFLU_RS08460	0.86	+0.2
1,886,293	+		PFLU_RS08460	0.86	+0.3
1,886,293	+		PFLU_RS08460	0.86	-2.2
1,886,293	+		PFLU_RS08460	0.86	-0.1
1,886,294	-		PFLU_RS08460	0.86	+0.5
1,886,294	-		PFLU_RS08460	0.86	+0.3
1,886,294	-		PFLU_RS08460	0.86	+0.8
1,886,294	-		PFLU_RS08460	0.86	-0.4
1,886,294	-		PFLU_RS08460	0.86	-0.3
1,886,311	+		PFLU_RS08460	0.88	-1.3
1,886,312	-		PFLU_RS08460	0.88	+0.7
1,886,430	+				+0.7
1,886,430	+				+0.6
1,886,433	+				-0.0
1,886,433	+				-0.5
1,886,433	+				+0.9
1,886,434	-				+0.5
1,886,438	-				-1.5
1,886,438	-				-0.5
1,886,530	+		PFLU_RS08465	0.36	-2.8
1,886,530	+		PFLU_RS08465	0.36	-1.5
1,886,530	+		PFLU_RS08465	0.36	+0.3
1,886,530	+		PFLU_RS08465	0.36	+0.9
1,886,530	+		PFLU_RS08465	0.36	-0.6
1,886,530	+		PFLU_RS08465	0.36	-2.0
1,886,530	+		PFLU_RS08465	0.36	+0.3
1,886,530	+		PFLU_RS08465	0.36	-1.0
1,886,530	+		PFLU_RS08465	0.36	-1.4
1,886,530	+		PFLU_RS08465	0.36	+0.8
1,886,530	+		PFLU_RS08465	0.36	+0.3
1,886,530	+		PFLU_RS08465	0.36	+1.0
1,886,530	+		PFLU_RS08465	0.36	-0.2
1,886,530	+		PFLU_RS08465	0.36	-0.0
1,886,531	-		PFLU_RS08465	0.36	-0.9
1,886,531	-		PFLU_RS08465	0.36	-2.5
1,886,531	-		PFLU_RS08465	0.36	+1.0
1,886,531	-		PFLU_RS08465	0.36	-1.5
1,886,531	-		PFLU_RS08465	0.36	+0.8
1,886,531	-		PFLU_RS08465	0.36	-0.9
1,886,531	-		PFLU_RS08465	0.36	+1.8
1,886,531	-		PFLU_RS08465	0.36	+0.7
1,886,531	-		PFLU_RS08465	0.36	-0.2
1,886,531	-		PFLU_RS08465	0.36	-0.3
1,886,531	-		PFLU_RS08465	0.36	+0.4