Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS27720 and BWI76_RS27725 are separated by 3 nucleotides BWI76_RS27725 and BWI76_RS27730 overlap by 1 nucleotides BWI76_RS27730 and BWI76_RS27735 are separated by 209 nucleotides BWI76_RS27735 and BWI76_RS27740 are separated by 20 nucleotides
BWI76_RS27720: BWI76_RS27720 - carboxylate/amino acid/amine transporter, at 5,753,817 to 5,754,719
_RS27720
BWI76_RS27725: BWI76_RS27725 - hypothetical protein, at 5,754,723 to 5,754,980
_RS27725
BWI76_RS27730: BWI76_RS27730 - ISNCY family transposase, at 5,754,980 to 5,755,933
_RS27730
BWI76_RS27735: BWI76_RS27735 - hypothetical protein, at 5,756,143 to 5,756,436
_RS27735
BWI76_RS27740: BWI76_RS27740 - LacI family transcriptional regulator, at 5,756,457 to 5,757,398
_RS27740
Position (kb)
5754
5755
5756 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2
3 at 5753.992 kb on + strand, within BWI76_RS27720 at 5754.116 kb on + strand, within BWI76_RS27720 at 5754.196 kb on - strand, within BWI76_RS27720 at 5754.288 kb on + strand, within BWI76_RS27720 at 5754.293 kb on + strand, within BWI76_RS27720 at 5754.293 kb on + strand, within BWI76_RS27720 at 5754.296 kb on - strand, within BWI76_RS27720 at 5754.301 kb on - strand, within BWI76_RS27720 at 5754.301 kb on - strand, within BWI76_RS27720 at 5754.457 kb on + strand, within BWI76_RS27720 at 5754.502 kb on - strand, within BWI76_RS27720 at 5754.511 kb on + strand, within BWI76_RS27720 at 5754.519 kb on - strand, within BWI76_RS27720 at 5754.519 kb on - strand, within BWI76_RS27720 at 5754.582 kb on - strand, within BWI76_RS27720 at 5754.602 kb on - strand, within BWI76_RS27720 at 5754.625 kb on + strand, within BWI76_RS27720 at 5754.869 kb on + strand at 5754.898 kb on + strand at 5754.963 kb on + strand at 5755.016 kb on - strand at 5755.039 kb on + strand at 5755.231 kb on + strand, within BWI76_RS27730 at 5755.239 kb on - strand, within BWI76_RS27730 at 5755.290 kb on - strand, within BWI76_RS27730 at 5755.295 kb on - strand, within BWI76_RS27730 at 5755.315 kb on + strand, within BWI76_RS27730 at 5755.434 kb on - strand, within BWI76_RS27730 at 5755.539 kb on + strand, within BWI76_RS27730 at 5755.568 kb on - strand, within BWI76_RS27730 at 5755.671 kb on + strand, within BWI76_RS27730 at 5755.676 kb on + strand, within BWI76_RS27730 at 5755.684 kb on - strand, within BWI76_RS27730 at 5755.701 kb on + strand, within BWI76_RS27730 at 5755.741 kb on - strand, within BWI76_RS27730 at 5755.771 kb on + strand, within BWI76_RS27730 at 5755.789 kb on - strand, within BWI76_RS27730 at 5755.807 kb on - strand, within BWI76_RS27730 at 5755.809 kb on + strand, within BWI76_RS27730 at 5755.875 kb on + strand at 5755.993 kb on + strand at 5756.050 kb on + strand at 5756.180 kb on + strand, within BWI76_RS27735 at 5756.190 kb on + strand, within BWI76_RS27735 at 5756.207 kb on - strand, within BWI76_RS27735 at 5756.345 kb on - strand, within BWI76_RS27735 at 5756.420 kb on - strand at 5756.504 kb on + strand at 5756.597 kb on + strand, within BWI76_RS27740 at 5756.597 kb on + strand, within BWI76_RS27740 at 5756.597 kb on + strand, within BWI76_RS27740 at 5756.605 kb on - strand, within BWI76_RS27740 at 5756.605 kb on - strand, within BWI76_RS27740 at 5756.702 kb on + strand, within BWI76_RS27740 at 5756.728 kb on + strand, within BWI76_RS27740 at 5756.873 kb on - strand, within BWI76_RS27740 at 5756.897 kb on + strand, within BWI76_RS27740 at 5756.897 kb on + strand, within BWI76_RS27740
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 5,753,992 + BWI76_RS27720 0.19 +0.2 5,754,116 + BWI76_RS27720 0.33 +1.8 5,754,196 - BWI76_RS27720 0.42 -1.6 5,754,288 + BWI76_RS27720 0.52 -0.3 5,754,293 + BWI76_RS27720 0.53 -0.3 5,754,293 + BWI76_RS27720 0.53 -0.6 5,754,296 - BWI76_RS27720 0.53 +0.1 5,754,301 - BWI76_RS27720 0.54 -0.8 5,754,301 - BWI76_RS27720 0.54 +1.2 5,754,457 + BWI76_RS27720 0.71 -1.9 5,754,502 - BWI76_RS27720 0.76 +1.2 5,754,511 + BWI76_RS27720 0.77 -0.3 5,754,519 - BWI76_RS27720 0.78 +0.1 5,754,519 - BWI76_RS27720 0.78 -0.1 5,754,582 - BWI76_RS27720 0.85 +0.2 5,754,602 - BWI76_RS27720 0.87 -0.5 5,754,625 + BWI76_RS27720 0.89 -0.1 5,754,869 + -1.9 5,754,898 + -1.1 5,754,963 + -3.3 5,755,016 - -1.8 5,755,039 + -1.6 5,755,231 + BWI76_RS27730 0.26 -1.7 5,755,239 - BWI76_RS27730 0.27 +0.0 5,755,290 - BWI76_RS27730 0.32 +0.8 5,755,295 - BWI76_RS27730 0.33 +3.0 5,755,315 + BWI76_RS27730 0.35 -0.3 5,755,434 - BWI76_RS27730 0.48 +0.4 5,755,539 + BWI76_RS27730 0.59 -1.8 5,755,568 - BWI76_RS27730 0.62 -1.3 5,755,671 + BWI76_RS27730 0.72 -1.1 5,755,676 + BWI76_RS27730 0.73 +0.0 5,755,684 - BWI76_RS27730 0.74 +0.7 5,755,701 + BWI76_RS27730 0.76 -0.3 5,755,741 - BWI76_RS27730 0.80 -1.7 5,755,771 + BWI76_RS27730 0.83 -0.8 5,755,789 - BWI76_RS27730 0.85 -4.8 5,755,807 - BWI76_RS27730 0.87 -0.2 5,755,809 + BWI76_RS27730 0.87 +1.8 5,755,875 + +1.4 5,755,993 + +1.2 5,756,050 + +0.2 5,756,180 + BWI76_RS27735 0.13 -2.2 5,756,190 + BWI76_RS27735 0.16 -0.1 5,756,207 - BWI76_RS27735 0.22 +0.6 5,756,345 - BWI76_RS27735 0.69 -1.2 5,756,420 - -1.2 5,756,504 + -1.1 5,756,597 + BWI76_RS27740 0.15 -1.1 5,756,597 + BWI76_RS27740 0.15 +0.6 5,756,597 + BWI76_RS27740 0.15 +1.0 5,756,605 - BWI76_RS27740 0.16 +0.4 5,756,605 - BWI76_RS27740 0.16 +0.4 5,756,702 + BWI76_RS27740 0.26 +3.7 5,756,728 + BWI76_RS27740 0.29 +0.5 5,756,873 - BWI76_RS27740 0.44 -0.2 5,756,897 + BWI76_RS27740 0.47 -0.3 5,756,897 + BWI76_RS27740 0.47 -0.4
Or see this region's nucleotide sequence