Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS27400 and BWI76_RS27405 are separated by 275 nucleotides BWI76_RS27405 and BWI76_RS27410 are separated by 5 nucleotides BWI76_RS27410 and BWI76_RS27415 overlap by 6 nucleotides BWI76_RS27415 and BWI76_RS27420 are separated by 83 nucleotides BWI76_RS27420 and BWI76_RS27425 are separated by 54 nucleotides
BWI76_RS27400: BWI76_RS27400 - chloride channel protein, at 5,684,883 to 5,686,142
_RS27400
BWI76_RS27405: BWI76_RS27405 - membrane protein, at 5,686,418 to 5,687,035
_RS27405
BWI76_RS27410: BWI76_RS27410 - DNA ligase B, at 5,687,041 to 5,688,717
_RS27410
BWI76_RS27415: BWI76_RS27415 - hypothetical protein, at 5,688,712 to 5,688,891
_RS27415
BWI76_RS27420: BWI76_RS27420 - guanylate kinase, at 5,688,975 to 5,689,598
_RS27420
BWI76_RS27425: BWI76_RS27425 - DNA-directed RNA polymerase subunit omega, at 5,689,653 to 5,689,928
_RS27425
Position (kb) 5687
5688
5689 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5686.152 kb on + strand at 5686.224 kb on + strand at 5686.224 kb on + strand at 5686.231 kb on - strand at 5686.231 kb on - strand at 5686.232 kb on - strand at 5686.421 kb on - strand at 5686.421 kb on - strand at 5686.460 kb on + strand at 5686.545 kb on - strand, within BWI76_RS27405 at 5686.590 kb on + strand, within BWI76_RS27405 at 5686.592 kb on + strand, within BWI76_RS27405 at 5686.598 kb on - strand, within BWI76_RS27405 at 5686.634 kb on + strand, within BWI76_RS27405 at 5686.784 kb on + strand, within BWI76_RS27405 at 5686.816 kb on - strand, within BWI76_RS27405 at 5686.846 kb on - strand, within BWI76_RS27405 at 5686.864 kb on - strand, within BWI76_RS27405 at 5686.899 kb on - strand, within BWI76_RS27405 at 5686.899 kb on - strand at 5686.986 kb on + strand at 5687.283 kb on + strand, within BWI76_RS27410 at 5687.316 kb on + strand, within BWI76_RS27410 at 5687.413 kb on - strand, within BWI76_RS27410 at 5687.515 kb on + strand, within BWI76_RS27410 at 5687.515 kb on + strand, within BWI76_RS27410 at 5687.557 kb on + strand, within BWI76_RS27410 at 5687.557 kb on + strand, within BWI76_RS27410 at 5687.580 kb on - strand, within BWI76_RS27410 at 5687.757 kb on + strand, within BWI76_RS27410 at 5687.786 kb on - strand, within BWI76_RS27410 at 5687.941 kb on - strand, within BWI76_RS27410 at 5688.026 kb on - strand, within BWI76_RS27410 at 5688.059 kb on + strand, within BWI76_RS27410 at 5688.066 kb on + strand, within BWI76_RS27410 at 5688.121 kb on - strand, within BWI76_RS27410 at 5688.185 kb on - strand, within BWI76_RS27410 at 5688.202 kb on - strand, within BWI76_RS27410 at 5688.246 kb on - strand, within BWI76_RS27410 at 5688.287 kb on + strand, within BWI76_RS27410 at 5688.565 kb on + strand at 5688.570 kb on - strand at 5688.581 kb on + strand at 5688.632 kb on + strand at 5688.632 kb on + strand at 5688.693 kb on - strand at 5688.900 kb on + strand at 5688.900 kb on + strand at 5688.908 kb on - strand at 5688.926 kb on - strand at 5688.926 kb on - strand at 5688.926 kb on - strand at 5689.709 kb on + strand, within BWI76_RS27425
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 5,686,152 + +0.8 5,686,224 + -0.7 5,686,224 + -0.5 5,686,231 - -0.1 5,686,231 - -2.3 5,686,232 - -0.0 5,686,421 - +0.8 5,686,421 - -0.1 5,686,460 + -0.3 5,686,545 - BWI76_RS27405 0.21 +0.2 5,686,590 + BWI76_RS27405 0.28 -0.5 5,686,592 + BWI76_RS27405 0.28 +0.6 5,686,598 - BWI76_RS27405 0.29 -0.4 5,686,634 + BWI76_RS27405 0.35 +1.2 5,686,784 + BWI76_RS27405 0.59 -1.5 5,686,816 - BWI76_RS27405 0.64 +0.4 5,686,846 - BWI76_RS27405 0.69 -0.3 5,686,864 - BWI76_RS27405 0.72 +0.8 5,686,899 - BWI76_RS27405 0.78 +0.2 5,686,899 - -1.1 5,686,986 + -1.8 5,687,283 + BWI76_RS27410 0.14 +0.0 5,687,316 + BWI76_RS27410 0.16 -2.8 5,687,413 - BWI76_RS27410 0.22 -1.8 5,687,515 + BWI76_RS27410 0.28 -0.5 5,687,515 + BWI76_RS27410 0.28 +0.1 5,687,557 + BWI76_RS27410 0.31 +0.5 5,687,557 + BWI76_RS27410 0.31 -0.7 5,687,580 - BWI76_RS27410 0.32 -1.1 5,687,757 + BWI76_RS27410 0.43 +0.2 5,687,786 - BWI76_RS27410 0.44 -2.7 5,687,941 - BWI76_RS27410 0.54 +0.3 5,688,026 - BWI76_RS27410 0.59 -0.7 5,688,059 + BWI76_RS27410 0.61 +0.9 5,688,066 + BWI76_RS27410 0.61 -0.8 5,688,121 - BWI76_RS27410 0.64 -0.9 5,688,185 - BWI76_RS27410 0.68 -0.3 5,688,202 - BWI76_RS27410 0.69 +0.5 5,688,246 - BWI76_RS27410 0.72 -1.1 5,688,287 + BWI76_RS27410 0.74 -1.8 5,688,565 + -1.3 5,688,570 - +0.7 5,688,581 + +2.2 5,688,632 + +1.4 5,688,632 + -0.8 5,688,693 - +0.7 5,688,900 + +0.5 5,688,900 + +0.1 5,688,908 - +0.4 5,688,926 - +0.8 5,688,926 - -0.0 5,688,926 - -1.3 5,689,709 + BWI76_RS27425 0.20 -1.6
Or see this region's nucleotide sequence