Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24780 and BWI76_RS24785 are separated by 126 nucleotides BWI76_RS24785 and BWI76_RS24790 are separated by 37 nucleotides BWI76_RS24790 and BWI76_RS24795 are separated by 104 nucleotides
BWI76_RS24780: BWI76_RS24780 - glutathione-dependent reductase, at 5,165,351 to 5,166,337
_RS24780
BWI76_RS24785: BWI76_RS24785 - DUF805 domain-containing protein, at 5,166,464 to 5,166,832
_RS24785
BWI76_RS24790: BWI76_RS24790 - LysR family transcriptional regulator, at 5,166,870 to 5,167,766
_RS24790
BWI76_RS24795: BWI76_RS24795 - hypothetical protein, at 5,167,871 to 5,168,572
_RS24795
Position (kb) 5166
5167
5168 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3 at 5165.914 kb on - strand, within BWI76_RS24780 at 5165.925 kb on - strand, within BWI76_RS24780 at 5165.952 kb on + strand, within BWI76_RS24780 at 5166.053 kb on - strand, within BWI76_RS24780 at 5166.083 kb on + strand, within BWI76_RS24780 at 5166.084 kb on - strand, within BWI76_RS24780 at 5166.086 kb on - strand, within BWI76_RS24780 at 5166.188 kb on - strand, within BWI76_RS24780 at 5166.246 kb on + strand at 5166.326 kb on + strand at 5166.326 kb on + strand at 5166.461 kb on + strand at 5166.469 kb on - strand at 5166.552 kb on + strand, within BWI76_RS24785 at 5166.644 kb on - strand, within BWI76_RS24785 at 5166.674 kb on - strand, within BWI76_RS24785 at 5166.700 kb on + strand, within BWI76_RS24785 at 5166.707 kb on + strand, within BWI76_RS24785 at 5166.831 kb on + strand at 5166.921 kb on - strand at 5166.923 kb on + strand at 5166.923 kb on + strand at 5166.925 kb on + strand at 5166.977 kb on - strand, within BWI76_RS24790 at 5166.977 kb on - strand, within BWI76_RS24790 at 5166.982 kb on - strand, within BWI76_RS24790 at 5167.007 kb on - strand, within BWI76_RS24790 at 5167.014 kb on - strand, within BWI76_RS24790 at 5167.055 kb on - strand, within BWI76_RS24790 at 5167.096 kb on - strand, within BWI76_RS24790 at 5167.340 kb on + strand, within BWI76_RS24790 at 5167.340 kb on + strand at 5167.343 kb on - strand, within BWI76_RS24790 at 5167.348 kb on - strand, within BWI76_RS24790 at 5167.360 kb on - strand, within BWI76_RS24790 at 5167.441 kb on - strand, within BWI76_RS24790 at 5167.549 kb on + strand, within BWI76_RS24790 at 5167.653 kb on - strand, within BWI76_RS24790 at 5167.653 kb on - strand, within BWI76_RS24790 at 5167.653 kb on - strand, within BWI76_RS24790 at 5167.653 kb on - strand, within BWI76_RS24790 at 5167.897 kb on - strand at 5167.938 kb on + strand at 5168.156 kb on - strand, within BWI76_RS24795 at 5168.325 kb on + strand, within BWI76_RS24795 at 5168.391 kb on - strand, within BWI76_RS24795 at 5168.509 kb on + strand at 5168.586 kb on - strand at 5168.589 kb on - strand at 5168.655 kb on - strand at 5168.695 kb on - strand at 5168.697 kb on + strand at 5168.697 kb on + strand at 5168.759 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 5,165,914 - BWI76_RS24780 0.57 +0.5 5,165,925 - BWI76_RS24780 0.58 +0.2 5,165,952 + BWI76_RS24780 0.61 +0.3 5,166,053 - BWI76_RS24780 0.71 -0.1 5,166,083 + BWI76_RS24780 0.74 +0.2 5,166,084 - BWI76_RS24780 0.74 +0.5 5,166,086 - BWI76_RS24780 0.74 +0.6 5,166,188 - BWI76_RS24780 0.85 -1.7 5,166,246 + -0.5 5,166,326 + -0.5 5,166,326 + +0.3 5,166,461 + -1.5 5,166,469 - +1.2 5,166,552 + BWI76_RS24785 0.24 -2.0 5,166,644 - BWI76_RS24785 0.49 -0.7 5,166,674 - BWI76_RS24785 0.57 -0.4 5,166,700 + BWI76_RS24785 0.64 -3.0 5,166,707 + BWI76_RS24785 0.66 -3.6 5,166,831 + -0.7 5,166,921 - -0.6 5,166,923 + +0.7 5,166,923 + -0.3 5,166,925 + +3.4 5,166,977 - BWI76_RS24790 0.12 +1.0 5,166,977 - BWI76_RS24790 0.12 +1.4 5,166,982 - BWI76_RS24790 0.12 -5.0 5,167,007 - BWI76_RS24790 0.15 -0.5 5,167,014 - BWI76_RS24790 0.16 -2.0 5,167,055 - BWI76_RS24790 0.21 +0.5 5,167,096 - BWI76_RS24790 0.25 -1.7 5,167,340 + BWI76_RS24790 0.52 +0.1 5,167,340 + -1.7 5,167,343 - BWI76_RS24790 0.53 +0.3 5,167,348 - BWI76_RS24790 0.53 +1.1 5,167,360 - BWI76_RS24790 0.55 +0.4 5,167,441 - BWI76_RS24790 0.64 -0.3 5,167,549 + BWI76_RS24790 0.76 -1.2 5,167,653 - BWI76_RS24790 0.87 +2.0 5,167,653 - BWI76_RS24790 0.87 -0.2 5,167,653 - BWI76_RS24790 0.87 -2.5 5,167,653 - BWI76_RS24790 0.87 -2.6 5,167,897 - -0.9 5,167,938 + +0.2 5,168,156 - BWI76_RS24795 0.41 +1.4 5,168,325 + BWI76_RS24795 0.65 +0.4 5,168,391 - BWI76_RS24795 0.74 +0.5 5,168,509 + +0.8 5,168,586 - -1.1 5,168,589 - +0.7 5,168,655 - -0.1 5,168,695 - +0.3 5,168,697 + -0.5 5,168,697 + +0.5 5,168,759 + +0.1
Or see this region's nucleotide sequence