Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS20120 and BWI76_RS20125 are separated by 425 nucleotides BWI76_RS20125 and BWI76_RS20130 are separated by 202 nucleotides
BWI76_RS20120: BWI76_RS20120 - fimbrial protein, at 4,215,280 to 4,215,807
_RS20120
BWI76_RS20125: BWI76_RS20125 - integrase, at 4,216,233 to 4,216,784
_RS20125
BWI76_RS20130: BWI76_RS20130 - NADH-quinone oxidoreductase subunit N, at 4,216,987 to 4,218,444
_RS20130
Position (kb)
4216
4217 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1
2 at 4215.402 kb on + strand, within BWI76_RS20120 at 4215.414 kb on - strand, within BWI76_RS20120 at 4215.479 kb on + strand, within BWI76_RS20120 at 4215.487 kb on - strand, within BWI76_RS20120 at 4215.668 kb on + strand, within BWI76_RS20120 at 4215.676 kb on - strand, within BWI76_RS20120 at 4215.730 kb on - strand, within BWI76_RS20120 at 4215.730 kb on - strand, within BWI76_RS20120 at 4215.734 kb on + strand, within BWI76_RS20120 at 4215.745 kb on - strand, within BWI76_RS20120 at 4215.745 kb on - strand, within BWI76_RS20120 at 4215.745 kb on - strand, within BWI76_RS20120 at 4215.747 kb on + strand, within BWI76_RS20120 at 4215.747 kb on + strand, within BWI76_RS20120 at 4215.747 kb on + strand, within BWI76_RS20120 at 4215.752 kb on + strand, within BWI76_RS20120 at 4215.752 kb on + strand, within BWI76_RS20120 at 4215.752 kb on + strand, within BWI76_RS20120 at 4215.752 kb on + strand, within BWI76_RS20120 at 4215.752 kb on + strand, within BWI76_RS20120 at 4215.752 kb on + strand, within BWI76_RS20120 at 4215.752 kb on + strand, within BWI76_RS20120 at 4215.760 kb on - strand at 4215.760 kb on - strand at 4215.760 kb on - strand at 4215.760 kb on - strand at 4215.760 kb on - strand at 4215.760 kb on - strand at 4215.760 kb on - strand at 4215.760 kb on - strand at 4215.760 kb on - strand at 4215.760 kb on - strand at 4215.772 kb on + strand at 4215.780 kb on - strand at 4215.780 kb on - strand at 4215.780 kb on - strand at 4215.780 kb on - strand at 4215.780 kb on - strand at 4215.780 kb on - strand at 4215.780 kb on - strand at 4215.780 kb on - strand at 4215.788 kb on - strand at 4215.818 kb on + strand at 4215.818 kb on + strand at 4215.826 kb on - strand at 4215.848 kb on + strand at 4215.848 kb on + strand at 4215.848 kb on + strand at 4215.848 kb on + strand at 4215.848 kb on + strand at 4215.856 kb on - strand at 4215.856 kb on - strand at 4215.856 kb on - strand at 4215.856 kb on - strand at 4215.856 kb on - strand at 4215.856 kb on - strand at 4215.856 kb on - strand at 4215.885 kb on + strand at 4215.952 kb on + strand at 4216.028 kb on - strand at 4216.073 kb on - strand at 4216.074 kb on - strand at 4216.336 kb on + strand, within BWI76_RS20125 at 4216.357 kb on - strand, within BWI76_RS20125 at 4216.449 kb on + strand, within BWI76_RS20125 at 4216.529 kb on + strand, within BWI76_RS20125 at 4216.538 kb on + strand, within BWI76_RS20125 at 4216.539 kb on - strand, within BWI76_RS20125 at 4216.545 kb on - strand, within BWI76_RS20125 at 4216.546 kb on - strand, within BWI76_RS20125 at 4216.666 kb on - strand, within BWI76_RS20125 at 4216.719 kb on + strand, within BWI76_RS20125 at 4216.719 kb on + strand, within BWI76_RS20125 at 4216.723 kb on - strand, within BWI76_RS20125 at 4216.727 kb on - strand, within BWI76_RS20125 at 4216.728 kb on - strand, within BWI76_RS20125 at 4216.740 kb on + strand at 4216.741 kb on + strand at 4216.798 kb on + strand at 4216.798 kb on + strand at 4216.806 kb on - strand at 4216.808 kb on + strand at 4216.811 kb on - strand at 4216.958 kb on - strand at 4216.983 kb on - strand at 4216.990 kb on + strand at 4216.993 kb on - strand at 4216.993 kb on - strand at 4217.006 kb on - strand at 4217.010 kb on + strand at 4217.010 kb on + strand at 4217.015 kb on + strand at 4217.015 kb on + strand at 4217.020 kb on + strand at 4217.028 kb on - strand at 4217.042 kb on + strand at 4217.046 kb on + strand at 4217.050 kb on - strand at 4217.050 kb on - strand at 4217.090 kb on + strand at 4217.145 kb on + strand, within BWI76_RS20130 at 4217.145 kb on + strand, within BWI76_RS20130 at 4217.160 kb on - strand, within BWI76_RS20130 at 4217.427 kb on + strand, within BWI76_RS20130 at 4217.435 kb on - strand, within BWI76_RS20130
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 4,215,402 + BWI76_RS20120 0.23 +0.4 4,215,414 - BWI76_RS20120 0.25 -0.4 4,215,479 + BWI76_RS20120 0.38 +0.6 4,215,487 - BWI76_RS20120 0.39 +0.5 4,215,668 + BWI76_RS20120 0.73 -0.2 4,215,676 - BWI76_RS20120 0.75 -0.2 4,215,730 - BWI76_RS20120 0.85 +0.7 4,215,730 - BWI76_RS20120 0.85 +1.4 4,215,734 + BWI76_RS20120 0.86 -0.7 4,215,745 - BWI76_RS20120 0.88 -1.7 4,215,745 - BWI76_RS20120 0.88 -2.1 4,215,745 - BWI76_RS20120 0.88 -3.1 4,215,747 + BWI76_RS20120 0.88 +0.2 4,215,747 + BWI76_RS20120 0.88 +0.5 4,215,747 + BWI76_RS20120 0.88 -0.1 4,215,752 + BWI76_RS20120 0.89 +0.5 4,215,752 + BWI76_RS20120 0.89 -0.9 4,215,752 + BWI76_RS20120 0.89 -0.4 4,215,752 + BWI76_RS20120 0.89 +0.8 4,215,752 + BWI76_RS20120 0.89 -0.3 4,215,752 + BWI76_RS20120 0.89 -1.7 4,215,752 + BWI76_RS20120 0.89 +0.2 4,215,760 - +0.9 4,215,760 - -1.3 4,215,760 - -0.7 4,215,760 - -1.0 4,215,760 - -0.0 4,215,760 - -0.2 4,215,760 - -2.8 4,215,760 - -0.1 4,215,760 - +1.9 4,215,760 - +0.7 4,215,772 + +0.5 4,215,780 - -0.1 4,215,780 - -0.5 4,215,780 - -1.2 4,215,780 - -2.8 4,215,780 - +0.7 4,215,780 - -0.3 4,215,780 - -0.3 4,215,780 - +0.2 4,215,788 - -1.2 4,215,818 + +0.0 4,215,818 + +0.7 4,215,826 - +0.6 4,215,848 + +0.6 4,215,848 + -0.4 4,215,848 + +0.2 4,215,848 + -0.6 4,215,848 + -0.2 4,215,856 - -0.9 4,215,856 - +1.4 4,215,856 - -0.4 4,215,856 - +1.0 4,215,856 - -1.5 4,215,856 - -0.1 4,215,856 - +0.4 4,215,885 + -1.2 4,215,952 + -0.6 4,216,028 - -0.9 4,216,073 - -1.7 4,216,074 - -1.5 4,216,336 + BWI76_RS20125 0.19 +0.3 4,216,357 - BWI76_RS20125 0.22 -0.6 4,216,449 + BWI76_RS20125 0.39 -0.4 4,216,529 + BWI76_RS20125 0.54 +1.0 4,216,538 + BWI76_RS20125 0.55 -1.2 4,216,539 - BWI76_RS20125 0.55 -1.2 4,216,545 - BWI76_RS20125 0.57 +0.6 4,216,546 - BWI76_RS20125 0.57 +0.8 4,216,666 - BWI76_RS20125 0.78 +1.1 4,216,719 + BWI76_RS20125 0.88 +1.6 4,216,719 + BWI76_RS20125 0.88 +1.4 4,216,723 - BWI76_RS20125 0.89 -2.6 4,216,727 - BWI76_RS20125 0.89 -3.5 4,216,728 - BWI76_RS20125 0.90 +1.2 4,216,740 + -3.0 4,216,741 + +0.1 4,216,798 + +0.6 4,216,798 + -3.5 4,216,806 - -2.7 4,216,808 + -3.2 4,216,811 - -1.2 4,216,958 - +0.7 4,216,983 - -2.9 4,216,990 + -1.2 4,216,993 - +1.0 4,216,993 - -1.0 4,217,006 - +0.1 4,217,010 + +0.9 4,217,010 + -2.2 4,217,015 + -1.9 4,217,015 + -4.4 4,217,020 + +1.1 4,217,028 - +0.1 4,217,042 + -3.1 4,217,046 + -5.2 4,217,050 - -6.1 4,217,050 - -2.6 4,217,090 + -0.7 4,217,145 + BWI76_RS20130 0.11 -3.5 4,217,145 + BWI76_RS20130 0.11 -1.5 4,217,160 - BWI76_RS20130 0.12 -5.6 4,217,427 + BWI76_RS20130 0.30 -1.3 4,217,435 - BWI76_RS20130 0.31 -3.6
Or see this region's nucleotide sequence