Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS15130 and BWI76_RS15135 are separated by 300 nucleotides BWI76_RS15135 and BWI76_RS15140 are separated by 35 nucleotides BWI76_RS15140 and BWI76_RS15145 overlap by 4 nucleotides
BWI76_RS15130: BWI76_RS15130 - hypothetical protein, at 3,171,192 to 3,171,638
_RS15130
BWI76_RS15135: BWI76_RS15135 - hypothetical protein, at 3,171,939 to 3,172,229
_RS15135
BWI76_RS15140: BWI76_RS15140 - CusA/CzcA family heavy metal efflux RND transporter, at 3,172,265 to 3,175,378
_RS15140
BWI76_RS15145: BWI76_RS15145 - efflux transporter periplasmic adaptor subunit, at 3,175,375 to 3,176,844
_RS15145
Position (kb)
3172
3173
3174
3175
3176 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3171.359 kb on + strand, within BWI76_RS15130 at 3171.413 kb on - strand, within BWI76_RS15130 at 3171.745 kb on - strand at 3171.904 kb on - strand at 3172.060 kb on - strand, within BWI76_RS15135 at 3172.090 kb on - strand, within BWI76_RS15135 at 3172.159 kb on + strand, within BWI76_RS15135 at 3172.167 kb on - strand, within BWI76_RS15135 at 3172.346 kb on + strand at 3172.542 kb on - strand at 3172.695 kb on + strand, within BWI76_RS15140 at 3172.703 kb on - strand, within BWI76_RS15140 at 3172.801 kb on + strand, within BWI76_RS15140 at 3173.250 kb on - strand, within BWI76_RS15140 at 3173.250 kb on - strand, within BWI76_RS15140 at 3173.368 kb on + strand, within BWI76_RS15140 at 3173.578 kb on - strand, within BWI76_RS15140 at 3173.597 kb on - strand, within BWI76_RS15140 at 3173.904 kb on - strand, within BWI76_RS15140 at 3173.910 kb on - strand, within BWI76_RS15140 at 3173.945 kb on + strand, within BWI76_RS15140 at 3173.960 kb on - strand, within BWI76_RS15140 at 3174.009 kb on - strand, within BWI76_RS15140 at 3174.366 kb on - strand, within BWI76_RS15140 at 3174.394 kb on + strand, within BWI76_RS15140 at 3174.404 kb on + strand, within BWI76_RS15140 at 3174.404 kb on + strand, within BWI76_RS15140 at 3174.404 kb on + strand, within BWI76_RS15140 at 3174.412 kb on - strand, within BWI76_RS15140 at 3174.422 kb on + strand, within BWI76_RS15140 at 3174.490 kb on + strand, within BWI76_RS15140 at 3174.769 kb on + strand, within BWI76_RS15140 at 3174.858 kb on - strand, within BWI76_RS15140 at 3175.080 kb on - strand at 3175.182 kb on - strand at 3175.386 kb on + strand at 3175.394 kb on - strand at 3175.394 kb on - strand at 3175.594 kb on - strand, within BWI76_RS15145 at 3175.681 kb on - strand, within BWI76_RS15145 at 3175.681 kb on - strand, within BWI76_RS15145 at 3175.683 kb on + strand, within BWI76_RS15145 at 3175.691 kb on - strand, within BWI76_RS15145 at 3176.300 kb on + strand, within BWI76_RS15145 at 3176.374 kb on - strand, within BWI76_RS15145
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 3,171,359 + BWI76_RS15130 0.37 +0.5 3,171,413 - BWI76_RS15130 0.49 +0.6 3,171,745 - -2.1 3,171,904 - -0.6 3,172,060 - BWI76_RS15135 0.42 +0.2 3,172,090 - BWI76_RS15135 0.52 -3.0 3,172,159 + BWI76_RS15135 0.76 -0.7 3,172,167 - BWI76_RS15135 0.78 +0.3 3,172,346 + +0.3 3,172,542 - -0.1 3,172,695 + BWI76_RS15140 0.14 +0.7 3,172,703 - BWI76_RS15140 0.14 +1.0 3,172,801 + BWI76_RS15140 0.17 +1.1 3,173,250 - BWI76_RS15140 0.32 -0.6 3,173,250 - BWI76_RS15140 0.32 -0.2 3,173,368 + BWI76_RS15140 0.35 +0.7 3,173,578 - BWI76_RS15140 0.42 +2.3 3,173,597 - BWI76_RS15140 0.43 -0.5 3,173,904 - BWI76_RS15140 0.53 -0.2 3,173,910 - BWI76_RS15140 0.53 -3.2 3,173,945 + BWI76_RS15140 0.54 -0.6 3,173,960 - BWI76_RS15140 0.54 +0.8 3,174,009 - BWI76_RS15140 0.56 -1.4 3,174,366 - BWI76_RS15140 0.67 +0.9 3,174,394 + BWI76_RS15140 0.68 +0.9 3,174,404 + BWI76_RS15140 0.69 +0.8 3,174,404 + BWI76_RS15140 0.69 -0.9 3,174,404 + BWI76_RS15140 0.69 +1.0 3,174,412 - BWI76_RS15140 0.69 +0.6 3,174,422 + BWI76_RS15140 0.69 +0.8 3,174,490 + BWI76_RS15140 0.71 +1.3 3,174,769 + BWI76_RS15140 0.80 +0.6 3,174,858 - BWI76_RS15140 0.83 -0.2 3,175,080 - +0.8 3,175,182 - -1.0 3,175,386 + +2.0 3,175,394 - +0.4 3,175,394 - +0.1 3,175,594 - BWI76_RS15145 0.15 +0.1 3,175,681 - BWI76_RS15145 0.21 -0.6 3,175,681 - BWI76_RS15145 0.21 +0.3 3,175,683 + BWI76_RS15145 0.21 -0.7 3,175,691 - BWI76_RS15145 0.21 +0.2 3,176,300 + BWI76_RS15145 0.63 -0.6 3,176,374 - BWI76_RS15145 0.68 -0.9
Or see this region's nucleotide sequence