Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS01935 and BWI76_RS01940 are separated by 2 nucleotides BWI76_RS01940 and BWI76_RS01945 are separated by 191 nucleotides BWI76_RS01945 and BWI76_RS01950 are separated by 132 nucleotides BWI76_RS01950 and BWI76_RS01955 are separated by 246 nucleotides BWI76_RS01955 and BWI76_RS01960 are separated by 86 nucleotides
BWI76_RS01935: BWI76_RS01935 - thiamin phosphate synthase, at 394,542 to 394,958
_RS01935
BWI76_RS01940: BWI76_RS01940 - hypothetical protein, at 394,961 to 395,314
_RS01940
BWI76_RS01945: BWI76_RS01945 - hypothetical protein, at 395,506 to 395,753
_RS01945
BWI76_RS01950: BWI76_RS01950 - excinuclease ABC subunit A, at 395,886 to 398,711
_RS01950
BWI76_RS01955: BWI76_RS01955 - ssDNA-binding protein, at 398,958 to 399,485
_RS01955
BWI76_RS01960: BWI76_RS01960 - lytic transglycosylase F, at 399,572 to 401,098
_RS01960
Position (kb) 395
396
397
398
399 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 394.934 kb on - strand at 394.994 kb on + strand at 395.004 kb on + strand, within BWI76_RS01940 at 395.009 kb on + strand, within BWI76_RS01940 at 395.044 kb on + strand, within BWI76_RS01940 at 395.321 kb on + strand at 395.347 kb on - strand at 395.442 kb on + strand at 395.529 kb on - strand at 396.040 kb on - strand at 396.069 kb on - strand at 396.099 kb on - strand at 396.253 kb on - strand, within BWI76_RS01950 at 396.350 kb on - strand, within BWI76_RS01950 at 396.409 kb on + strand, within BWI76_RS01950 at 396.417 kb on - strand, within BWI76_RS01950 at 396.517 kb on - strand, within BWI76_RS01950 at 396.525 kb on + strand, within BWI76_RS01950 at 396.530 kb on + strand, within BWI76_RS01950 at 396.530 kb on + strand, within BWI76_RS01950 at 396.538 kb on - strand, within BWI76_RS01950 at 396.757 kb on + strand, within BWI76_RS01950 at 396.825 kb on - strand, within BWI76_RS01950 at 396.853 kb on - strand, within BWI76_RS01950 at 396.994 kb on + strand, within BWI76_RS01950 at 397.001 kb on + strand, within BWI76_RS01950 at 397.151 kb on + strand, within BWI76_RS01950 at 397.194 kb on + strand, within BWI76_RS01950 at 397.194 kb on + strand, within BWI76_RS01950 at 397.202 kb on - strand, within BWI76_RS01950 at 397.274 kb on + strand, within BWI76_RS01950 at 397.467 kb on + strand, within BWI76_RS01950 at 397.489 kb on - strand, within BWI76_RS01950 at 397.535 kb on - strand, within BWI76_RS01950 at 397.565 kb on + strand, within BWI76_RS01950 at 397.673 kb on - strand, within BWI76_RS01950 at 397.687 kb on + strand, within BWI76_RS01950 at 397.695 kb on - strand, within BWI76_RS01950 at 397.821 kb on + strand at 397.859 kb on - strand, within BWI76_RS01950 at 397.883 kb on - strand, within BWI76_RS01950 at 398.095 kb on - strand, within BWI76_RS01950 at 398.095 kb on - strand, within BWI76_RS01950 at 398.187 kb on + strand, within BWI76_RS01950 at 398.187 kb on + strand, within BWI76_RS01950 at 398.195 kb on - strand, within BWI76_RS01950 at 398.251 kb on - strand, within BWI76_RS01950 at 398.292 kb on - strand, within BWI76_RS01950 at 398.292 kb on - strand, within BWI76_RS01950 at 398.535 kb on + strand at 398.591 kb on - strand at 398.606 kb on - strand at 398.695 kb on + strand at 399.518 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 394,934 - -0.6 394,994 + -0.1 395,004 + BWI76_RS01940 0.12 -0.5 395,009 + BWI76_RS01940 0.14 -0.3 395,044 + BWI76_RS01940 0.23 -0.1 395,321 + +0.3 395,347 - +1.0 395,442 + +0.4 395,529 - -0.3 396,040 - +2.6 396,069 - +0.5 396,099 - +1.6 396,253 - BWI76_RS01950 0.13 +1.4 396,350 - BWI76_RS01950 0.16 +1.5 396,409 + BWI76_RS01950 0.19 +2.2 396,417 - BWI76_RS01950 0.19 +0.7 396,517 - BWI76_RS01950 0.22 +3.0 396,525 + BWI76_RS01950 0.23 +1.4 396,530 + BWI76_RS01950 0.23 +1.7 396,530 + BWI76_RS01950 0.23 +0.3 396,538 - BWI76_RS01950 0.23 +1.0 396,757 + BWI76_RS01950 0.31 +1.5 396,825 - BWI76_RS01950 0.33 -1.9 396,853 - BWI76_RS01950 0.34 +3.6 396,994 + BWI76_RS01950 0.39 +2.5 397,001 + BWI76_RS01950 0.39 +1.9 397,151 + BWI76_RS01950 0.45 +1.3 397,194 + BWI76_RS01950 0.46 -0.3 397,194 + BWI76_RS01950 0.46 +0.3 397,202 - BWI76_RS01950 0.47 +0.3 397,274 + BWI76_RS01950 0.49 -1.7 397,467 + BWI76_RS01950 0.56 -0.0 397,489 - BWI76_RS01950 0.57 +1.0 397,535 - BWI76_RS01950 0.58 +1.0 397,565 + BWI76_RS01950 0.59 +0.8 397,673 - BWI76_RS01950 0.63 +0.3 397,687 + BWI76_RS01950 0.64 +1.8 397,695 - BWI76_RS01950 0.64 +1.1 397,821 + -0.7 397,859 - BWI76_RS01950 0.70 +0.9 397,883 - BWI76_RS01950 0.71 +1.5 398,095 - BWI76_RS01950 0.78 +0.6 398,095 - BWI76_RS01950 0.78 +0.7 398,187 + BWI76_RS01950 0.81 +0.6 398,187 + BWI76_RS01950 0.81 +0.2 398,195 - BWI76_RS01950 0.82 +1.4 398,251 - BWI76_RS01950 0.84 +1.4 398,292 - BWI76_RS01950 0.85 +0.4 398,292 - BWI76_RS01950 0.85 +1.8 398,535 + -0.2 398,591 - +1.0 398,606 - +1.0 398,695 + +1.2 399,518 - +0.7
Or see this region's nucleotide sequence