Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS16550

Experiment: Sucrose (C) and Glycine betaine (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sucrose (C) and Glycine betaine (N); with TAPS
3,751,881	+				+0.5
3,751,881	+				-1.4
3,751,882	-				+0.2
3,751,882	-				+1.6
3,751,929	+				-0.6
3,751,929	+				+0.3
3,751,930	-				+1.0
3,751,940	+		PFLU_RS16540	0.10	-3.0
3,751,940	+		PFLU_RS16540	0.10	+0.3
3,751,941	-		PFLU_RS16540	0.10	+0.0
3,752,010	+		PFLU_RS16540	0.29	-0.0
3,752,011	-		PFLU_RS16540	0.30	+0.5
3,752,054	+		PFLU_RS16540	0.41	+0.4
3,752,055	-		PFLU_RS16540	0.42	-1.4
3,752,090	-		PFLU_RS16540	0.51	-0.4
3,752,090	-		PFLU_RS16540	0.51	+0.0
3,752,158	+		PFLU_RS16540	0.70	+0.2
3,752,158	+		PFLU_RS16540	0.70	-0.1
3,752,158	+		PFLU_RS16540	0.70	+0.3
3,752,158	+		PFLU_RS16540	0.70	-0.5
3,752,158	+		PFLU_RS16540	0.70	+1.3
3,752,158	+		PFLU_RS16540	0.70	+0.4
3,752,159	-		PFLU_RS16540	0.70	-0.4
3,752,159	-		PFLU_RS16540	0.70	-0.6
3,752,159	-		PFLU_RS16540	0.70	+0.6
3,752,159	-		PFLU_RS16540	0.70	+1.9
3,752,159	-		PFLU_RS16540	0.70	-0.9
3,752,159	-		PFLU_RS16540	0.70	+1.3
3,752,159	-		PFLU_RS16540	0.70	-0.7
3,752,159	-		PFLU_RS16540	0.70	+0.9
3,752,159	-		PFLU_RS16540	0.70	-0.5
3,752,159	-		PFLU_RS16540	0.70	-0.2
3,752,159	-		PFLU_RS16540	0.70	-1.4
3,752,159	-		PFLU_RS16540	0.70	+0.0
3,752,168	+		PFLU_RS16540	0.72	-0.7
3,752,168	+		PFLU_RS16540	0.72	+0.6
3,752,168	+		PFLU_RS16540	0.72	-0.4
3,752,168	+		PFLU_RS16540	0.72	-0.2
3,752,168	+		PFLU_RS16540	0.72	-0.4
3,752,168	+		PFLU_RS16540	0.72	-1.2
3,752,169	-		PFLU_RS16540	0.73	-0.7
3,752,169	-		PFLU_RS16540	0.73	-0.1
3,752,169	-		PFLU_RS16540	0.73	+0.8
3,752,169	-		PFLU_RS16540	0.73	-2.1
3,752,227	-		PFLU_RS16540	0.89	+0.6
3,752,230	+		PFLU_RS16540	0.89	-0.6
3,752,230	+		PFLU_RS16540	0.89	-0.3
3,752,231	-		PFLU_RS16540	0.90	-0.5
3,752,231	-		PFLU_RS16540	0.90	+0.8
3,752,231	-		PFLU_RS16540	0.90	-0.2
3,752,236	+				+0.1
3,752,236	+				-0.3
3,752,236	+				-0.1
3,752,237	-				+0.1
3,752,237	-				-0.1
3,752,250	-				-0.0
3,752,250	-				+0.8
3,752,335	-				-1.1
3,752,365	+				-0.8
3,752,365	+				+0.2
3,752,365	+				-1.0
3,752,365	+				-0.3
3,752,365	+				-0.1
3,752,365	+				-0.2
3,752,365	+				-0.9
3,752,365	+				+0.4
3,752,365	+				-0.5
3,752,365	+				-1.3
3,752,365	+				+0.6
3,752,365	+				+0.3
3,752,365	+				+0.4
3,752,365	+				+0.0
3,752,365	+				+0.5
3,752,365	+				+0.2
3,752,365	+				-0.7
3,752,365	+				+0.1
3,752,365	+				+0.4
3,752,365	+				-0.0
3,752,365	+				-0.4
3,752,365	+				-0.8
3,752,365	+				-1.7
3,752,365	+				-0.0
3,752,365	+				-1.1
3,752,365	+				+0.9
3,752,366	-				+0.6
3,752,366	-				+0.7
3,752,366	-				+0.6
3,752,366	-				-0.5
3,752,366	-				+0.8
3,752,366	-				+0.4
3,752,366	-				-0.0
3,752,366	-				+0.6
3,752,366	-				-0.1
3,752,366	-				-0.2
3,752,366	-				+0.9
3,752,366	-				+0.2
3,752,366	-				-1.1
3,752,366	-				-0.6
3,752,366	-				+0.1
3,752,366	-				-0.0
3,752,366	-				+0.5
3,752,366	-				-0.8
3,752,366	-				-0.1
3,752,366	-				-0.9
3,752,366	-				-1.0
3,752,366	-				+1.3
3,752,366	-				-0.2
3,752,366	-				+0.3
3,752,366	-				-0.1
3,752,366	-				-0.3
3,752,366	-				+0.6
3,752,366	-				+0.1
3,752,366	-				+1.5
3,752,366	-				-0.7
3,752,369	+				-0.2
3,752,369	+				-1.1
3,752,369	+				+0.1
3,752,369	+				-1.5
3,752,369	+				+0.3
3,752,370	-				+0.0
3,752,370	-				+0.3
3,752,370	-				+0.6
3,752,370	-				+0.9
3,752,370	-				-0.4
3,752,370	-				-0.3
3,752,370	-				+2.3
3,752,370	-				+0.1
3,752,427	+		PFLU_RS16545	0.13	+1.3
3,752,427	+		PFLU_RS16545	0.13	+0.2
3,752,427	+		PFLU_RS16545	0.13	+0.7
3,752,427	+		PFLU_RS16545	0.13	-0.0
3,752,427	+		PFLU_RS16545	0.13	-1.2
3,752,427	+		PFLU_RS16545	0.13	-0.5
3,752,427	+		PFLU_RS16545	0.13	+0.8
3,752,427	+		PFLU_RS16545	0.13	-1.3
3,752,428	-		PFLU_RS16545	0.13	-0.2
3,752,428	-		PFLU_RS16545	0.13	+0.1
3,752,428	-		PFLU_RS16545	0.13	+0.9
3,752,428	-		PFLU_RS16545	0.13	-0.3
3,752,428	-		PFLU_RS16545	0.13	+1.0
3,752,429	+		PFLU_RS16545	0.13	+0.0
3,752,429	+		PFLU_RS16545	0.13	-0.2
3,752,430	-		PFLU_RS16545	0.13	-1.7
3,752,430	-		PFLU_RS16545	0.13	-0.3
3,752,458	+		PFLU_RS16545	0.19	-0.4
3,752,458	+		PFLU_RS16545	0.19	-0.2
3,752,458	+		PFLU_RS16545	0.19	-0.3
3,752,458	+		PFLU_RS16545	0.19	-0.2
3,752,458	+		PFLU_RS16545	0.19	-0.7
3,752,458	+		PFLU_RS16545	0.19	+0.9
3,752,459	-		PFLU_RS16545	0.19	-0.7
3,752,459	-		PFLU_RS16545	0.19	+0.2
3,752,459	-		PFLU_RS16545	0.19	+0.2
3,752,459	-		PFLU_RS16545	0.19	+0.9
3,752,459	-		PFLU_RS16545	0.19	-0.1
3,752,459	-		PFLU_RS16545	0.19	+1.5
3,752,459	-		PFLU_RS16545	0.19	+0.6
3,752,459	-		PFLU_RS16545	0.19	+0.3
3,752,500	+		PFLU_RS16545	0.28	-0.5
3,752,500	+		PFLU_RS16545	0.28	-1.1
3,752,517	+		PFLU_RS16545	0.31	-0.4
3,752,517	+		PFLU_RS16545	0.31	+0.1
3,752,517	+		PFLU_RS16545	0.31	-0.7
3,752,517	+		PFLU_RS16545	0.31	+0.9
3,752,518	-		PFLU_RS16545	0.32	+0.9
3,752,534	-		PFLU_RS16545	0.35	-0.6
3,752,564	+		PFLU_RS16545	0.41	-1.5
3,752,564	+		PFLU_RS16545	0.41	-0.0
3,752,564	+		PFLU_RS16545	0.41	-0.3
3,752,564	+		PFLU_RS16545	0.41	-0.3
3,752,565	-		PFLU_RS16545	0.41	-1.6
3,752,566	+		PFLU_RS16545	0.42	-0.4
3,752,567	-		PFLU_RS16545	0.42	+0.8
3,752,567	-		PFLU_RS16545	0.42	+0.3
3,752,567	-		PFLU_RS16545	0.42	-1.9
3,752,567	-		PFLU_RS16545	0.42	-1.1
3,752,595	+		PFLU_RS16545	0.48	+1.2
3,752,624	+		PFLU_RS16545	0.54	-1.1
3,752,625	-		PFLU_RS16545	0.54	+0.0
3,752,625	-		PFLU_RS16545	0.54	+1.2
3,752,625	-		PFLU_RS16545	0.54	-1.8
3,752,625	-		PFLU_RS16545	0.54	-0.5
3,752,625	-		PFLU_RS16545	0.54	-0.3
3,752,625	-		PFLU_RS16545	0.54	+0.4
3,752,634	+		PFLU_RS16545	0.56	-0.1
3,752,634	+		PFLU_RS16545	0.56	-1.1
3,752,634	+		PFLU_RS16545	0.56	-1.3
3,752,635	-		PFLU_RS16545	0.56	-1.4
3,752,635	-		PFLU_RS16545	0.56	-0.7
3,752,635	-		PFLU_RS16545	0.56	+0.0
3,752,700	+		PFLU_RS16545	0.70	-1.1
3,752,700	+		PFLU_RS16545	0.70	-1.0
3,752,700	+		PFLU_RS16545	0.70	-0.2
3,752,700	+		PFLU_RS16545	0.70	+0.2
3,752,700	+		PFLU_RS16545	0.70	+0.2
3,752,700	+		PFLU_RS16545	0.70	-0.1
3,752,701	-		PFLU_RS16545	0.70	+1.2
3,752,701	-		PFLU_RS16545	0.70	+0.6
3,752,701	-		PFLU_RS16545	0.70	+0.5
3,752,701	-		PFLU_RS16545	0.70	+0.7
3,752,701	-		PFLU_RS16545	0.70	-2.2
3,752,701	-		PFLU_RS16545	0.70	+0.1
3,752,701	-		PFLU_RS16545	0.70	+0.7
3,752,704	+		PFLU_RS16545	0.70	-0.7
3,752,705	-		PFLU_RS16545	0.71	+1.0
3,752,768	+		PFLU_RS16545	0.84	-1.7
3,752,769	-		PFLU_RS16545	0.84	-0.4
3,752,778	-		PFLU_RS16545	0.86	-1.2
3,752,848	-				-0.1
3,752,864	+				-0.1
3,752,864	+				+0.6
3,752,864	+				-0.3
3,752,865	-				-2.3
3,752,865	-				-0.3
3,752,865	-				+0.4
3,752,865	-				+1.9
3,752,865	-				+0.7
3,752,865	-				+0.0
3,752,865	-				-0.5
3,752,933	+				-0.8
3,753,010	+		PFLU_RS16550	0.10	-0.1
3,753,011	-		PFLU_RS16550	0.10	-0.5
3,753,011	-		PFLU_RS16550	0.10	+0.3
3,753,011	-		PFLU_RS16550	0.10	+0.3
3,753,025	+		PFLU_RS16550	0.11	+0.8
3,753,026	-		PFLU_RS16550	0.11	+0.5
3,753,028	+		PFLU_RS16550	0.11	+1.0
3,753,028	+		PFLU_RS16550	0.11	-0.3
3,753,029	-		PFLU_RS16550	0.11	+0.8
3,753,029	-		PFLU_RS16550	0.11	-0.8
3,753,029	-		PFLU_RS16550	0.11	-0.2
3,753,029	-		PFLU_RS16550	0.11	-0.1
3,753,029	-		PFLU_RS16550	0.11	+0.1
3,753,034	+		PFLU_RS16550	0.12	+0.9
3,753,034	+		PFLU_RS16550	0.12	-0.4
3,753,034	+		PFLU_RS16550	0.12	-0.4
3,753,034	+		PFLU_RS16550	0.12	+0.2
3,753,034	+		PFLU_RS16550	0.12	+0.1
3,753,035	-		PFLU_RS16550	0.12	-0.3
3,753,035	-		PFLU_RS16550	0.12	+0.2
3,753,035	-		PFLU_RS16550	0.12	+0.8
3,753,035	-		PFLU_RS16550	0.12	-0.6
3,753,035	-		PFLU_RS16550	0.12	+0.5
3,753,035	-		PFLU_RS16550	0.12	-0.3
3,753,035	-		PFLU_RS16550	0.12	-0.2
3,753,080	+		PFLU_RS16550	0.15	-0.6
3,753,080	+		PFLU_RS16550	0.15	-0.1
3,753,080	+		PFLU_RS16550	0.15	+0.0
3,753,080	+		PFLU_RS16550	0.15	+0.2
3,753,080	+		PFLU_RS16550	0.15	+0.3
3,753,080	+		PFLU_RS16550	0.15	-1.1
3,753,080	+		PFLU_RS16550	0.15	+0.0
3,753,080	+		PFLU_RS16550	0.15	+1.2
3,753,080	+		PFLU_RS16550	0.15	+0.5
3,753,080	+		PFLU_RS16550	0.15	+0.7
3,753,081	-		PFLU_RS16550	0.15	+1.0
3,753,081	-		PFLU_RS16550	0.15	+0.6
3,753,130	+		PFLU_RS16550	0.18	+0.3
3,753,130	+		PFLU_RS16550	0.18	+0.7
3,753,130	+		PFLU_RS16550	0.18	+0.3
3,753,130	+		PFLU_RS16550	0.18	+0.7
3,753,130	+		PFLU_RS16550	0.18	+0.2
3,753,130	+		PFLU_RS16550	0.18	-0.7
3,753,130	+		PFLU_RS16550	0.18	-0.2
3,753,130	+		PFLU_RS16550	0.18	-0.4
3,753,130	+		PFLU_RS16550	0.18	-1.1
3,753,130	+		PFLU_RS16550	0.18	-0.1
3,753,130	+		PFLU_RS16550	0.18	-0.3
3,753,130	+		PFLU_RS16550	0.18	+0.1
3,753,131	-		PFLU_RS16550	0.18	+0.8
3,753,131	-		PFLU_RS16550	0.18	+0.9
3,753,131	-		PFLU_RS16550	0.18	+0.6
3,753,131	-		PFLU_RS16550	0.18	+1.4
3,753,131	-		PFLU_RS16550	0.18	-0.5
3,753,131	-		PFLU_RS16550	0.18	-0.1
3,753,131	-		PFLU_RS16550	0.18	-0.8
3,753,131	-		PFLU_RS16550	0.18	+1.2
3,753,131	-		PFLU_RS16550	0.18	-1.3
3,753,141	+		PFLU_RS16550	0.18	+0.0
3,753,141	+		PFLU_RS16550	0.18	-1.2
3,753,141	+		PFLU_RS16550	0.18	-0.8
3,753,141	+		PFLU_RS16550	0.18	-0.5
3,753,141	+		PFLU_RS16550	0.18	+0.1
3,753,142	-		PFLU_RS16550	0.18	-0.0
3,753,142	-		PFLU_RS16550	0.18	+0.1
3,753,142	-		PFLU_RS16550	0.18	+0.6
3,753,142	-		PFLU_RS16550	0.18	-0.9
3,753,142	-		PFLU_RS16550	0.18	+1.0
3,753,142	-		PFLU_RS16550	0.18	-0.3
3,753,142	-		PFLU_RS16550	0.18	-0.4
3,753,235	+		PFLU_RS16550	0.24	+0.8
3,753,235	+		PFLU_RS16550	0.24	+0.2
3,753,235	+		PFLU_RS16550	0.24	+0.8
3,753,235	+		PFLU_RS16550	0.24	+1.1
3,753,235	+		PFLU_RS16550	0.24	+0.2
3,753,236	-		PFLU_RS16550	0.24	-0.1
3,753,236	-		PFLU_RS16550	0.24	+1.9
3,753,236	-		PFLU_RS16550	0.24	+0.8
3,753,256	+		PFLU_RS16550	0.25	+0.4
3,753,256	+		PFLU_RS16550	0.25	+0.1
3,753,256	+		PFLU_RS16550	0.25	+0.7
3,753,256	+		PFLU_RS16550	0.25	+0.2
3,753,257	-		PFLU_RS16550	0.25	-0.0
3,753,257	-		PFLU_RS16550	0.25	+0.2
3,753,257	-		PFLU_RS16550	0.25	-0.2
3,753,257	-		PFLU_RS16550	0.25	-0.1
3,753,274	+		PFLU_RS16550	0.26	-0.1
3,753,274	+		PFLU_RS16550	0.26	-1.8
3,753,274	+		PFLU_RS16550	0.26	+1.2
3,753,274	+		PFLU_RS16550	0.26	-0.4
3,753,274	+		PFLU_RS16550	0.26	+0.4
3,753,274	+		PFLU_RS16550	0.26	-0.6
3,753,274	+		PFLU_RS16550	0.26	+0.4
3,753,275	-		PFLU_RS16550	0.27	+0.7
3,753,275	-		PFLU_RS16550	0.27	-0.2
3,753,275	-		PFLU_RS16550	0.27	-0.7
3,753,275	-		PFLU_RS16550	0.27	-0.3
3,753,275	-		PFLU_RS16550	0.27	-0.6
3,753,275	-		PFLU_RS16550	0.27	+0.1
3,753,275	-		PFLU_RS16550	0.27	-0.0
3,753,275	-		PFLU_RS16550	0.27	+1.7
3,753,275	-		PFLU_RS16550	0.27	-0.3
3,753,349	+		PFLU_RS16550	0.31	+0.2
3,753,349	+		PFLU_RS16550	0.31	-1.3
3,753,349	+		PFLU_RS16550	0.31	-0.8
3,753,373	+		PFLU_RS16550	0.33	+0.2
3,753,373	+		PFLU_RS16550	0.33	+0.6
3,753,373	+		PFLU_RS16550	0.33	+0.6
3,753,487	+		PFLU_RS16550	0.40	-0.3
3,753,487	+		PFLU_RS16550	0.40	-0.2
3,753,487	+		PFLU_RS16550	0.40	-0.3
3,753,487	+		PFLU_RS16550	0.40	+0.2
3,753,487	+		PFLU_RS16550	0.40	+0.6
3,753,487	+		PFLU_RS16550	0.40	-0.2
3,753,487	+		PFLU_RS16550	0.40	-0.8
3,753,488	-		PFLU_RS16550	0.40	-0.6
3,753,488	-		PFLU_RS16550	0.40	+1.2
3,753,488	-		PFLU_RS16550	0.40	-0.4
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