Experiment: KB with Gossypol-Acetic Acid Complex 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4421 and Psyr_4422 are separated by 142 nucleotides Psyr_4422 and Psyr_4423 are separated by 13 nucleotides Psyr_4423 and Psyr_4424 are separated by 84 nucleotides
Psyr_4421: Psyr_4421 - Protein of unknown function DUF1568, at 5,286,657 to 5,287,115
_4421
Psyr_4422: Psyr_4422 - Protein of unknown function DUF461, at 5,287,258 to 5,287,719
_4422
Psyr_4423: Psyr_4423 - conserved hypothetical protein, at 5,287,733 to 5,288,164
_4423
Psyr_4424: Psyr_4424 - Propeptide, PepSY amd peptidase M4:PepSY-associated TM helix, at 5,288,249 to 5,289,622
_4424
Position (kb) 5287
5288 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5286.307 kb on + strand at 5286.307 kb on + strand at 5286.307 kb on + strand at 5286.307 kb on + strand at 5286.309 kb on + strand at 5286.309 kb on + strand at 5286.309 kb on + strand at 5286.309 kb on + strand at 5286.309 kb on + strand at 5286.311 kb on + strand at 5286.321 kb on + strand at 5286.321 kb on + strand at 5286.321 kb on + strand at 5286.376 kb on - strand at 5286.376 kb on - strand at 5286.376 kb on - strand at 5286.376 kb on - strand at 5286.376 kb on - strand at 5286.376 kb on - strand at 5286.376 kb on - strand at 5286.376 kb on - strand at 5286.376 kb on - strand at 5286.678 kb on + strand at 5286.734 kb on + strand, within Psyr_4421 at 5286.734 kb on + strand, within Psyr_4421 at 5286.735 kb on - strand, within Psyr_4421 at 5286.735 kb on - strand, within Psyr_4421 at 5286.735 kb on - strand, within Psyr_4421 at 5286.735 kb on - strand, within Psyr_4421 at 5286.736 kb on + strand, within Psyr_4421 at 5286.854 kb on + strand, within Psyr_4421 at 5286.864 kb on + strand, within Psyr_4421 at 5286.864 kb on + strand, within Psyr_4421 at 5286.864 kb on + strand, within Psyr_4421 at 5286.864 kb on + strand, within Psyr_4421 at 5286.864 kb on + strand, within Psyr_4421 at 5286.865 kb on - strand, within Psyr_4421 at 5286.865 kb on - strand, within Psyr_4421 at 5286.865 kb on - strand, within Psyr_4421 at 5286.865 kb on - strand, within Psyr_4421 at 5286.877 kb on - strand, within Psyr_4421 at 5286.888 kb on - strand, within Psyr_4421 at 5286.924 kb on + strand, within Psyr_4421 at 5286.924 kb on + strand, within Psyr_4421 at 5286.925 kb on - strand, within Psyr_4421 at 5286.936 kb on + strand, within Psyr_4421 at 5287.048 kb on - strand, within Psyr_4421 at 5287.051 kb on + strand, within Psyr_4421 at 5287.051 kb on + strand, within Psyr_4421 at 5287.052 kb on - strand, within Psyr_4421 at 5287.052 kb on - strand, within Psyr_4421 at 5287.127 kb on + strand at 5287.127 kb on + strand at 5287.127 kb on + strand at 5287.127 kb on + strand at 5287.127 kb on + strand at 5287.127 kb on + strand at 5287.127 kb on + strand at 5287.127 kb on + strand at 5287.128 kb on - strand at 5287.128 kb on - strand at 5287.128 kb on - strand at 5287.128 kb on - strand at 5287.129 kb on + strand at 5287.129 kb on + strand at 5287.129 kb on + strand at 5287.129 kb on + strand at 5287.129 kb on + strand at 5287.129 kb on + strand at 5287.129 kb on + strand at 5287.130 kb on - strand at 5287.130 kb on - strand at 5287.130 kb on - strand at 5287.130 kb on - strand at 5287.130 kb on - strand at 5287.130 kb on - strand at 5287.130 kb on - strand at 5287.130 kb on - strand at 5287.130 kb on - strand at 5287.130 kb on - strand at 5287.130 kb on - strand at 5287.130 kb on - strand at 5287.130 kb on - strand at 5287.218 kb on + strand at 5287.218 kb on + strand at 5287.219 kb on - strand at 5287.219 kb on - strand at 5287.219 kb on - strand at 5287.324 kb on + strand, within Psyr_4422 at 5287.324 kb on + strand, within Psyr_4422 at 5287.324 kb on + strand, within Psyr_4422 at 5287.324 kb on + strand, within Psyr_4422 at 5287.324 kb on + strand, within Psyr_4422 at 5287.325 kb on - strand, within Psyr_4422 at 5287.325 kb on - strand, within Psyr_4422 at 5287.325 kb on - strand, within Psyr_4422 at 5287.325 kb on - strand, within Psyr_4422 at 5287.325 kb on - strand, within Psyr_4422 at 5287.325 kb on - strand, within Psyr_4422 at 5287.325 kb on - strand, within Psyr_4422 at 5287.325 kb on - strand, within Psyr_4422 at 5287.399 kb on + strand, within Psyr_4422 at 5287.400 kb on - strand, within Psyr_4422 at 5287.400 kb on - strand, within Psyr_4422 at 5287.490 kb on + strand, within Psyr_4422 at 5287.490 kb on + strand, within Psyr_4422 at 5287.490 kb on + strand, within Psyr_4422 at 5287.490 kb on + strand, within Psyr_4422 at 5287.490 kb on + strand, within Psyr_4422 at 5287.490 kb on + strand, within Psyr_4422 at 5287.490 kb on + strand, within Psyr_4422 at 5287.491 kb on - strand, within Psyr_4422 at 5287.491 kb on - strand, within Psyr_4422 at 5287.491 kb on - strand, within Psyr_4422 at 5287.491 kb on - strand, within Psyr_4422 at 5287.491 kb on - strand, within Psyr_4422 at 5287.491 kb on - strand, within Psyr_4422 at 5287.491 kb on - strand, within Psyr_4422 at 5287.491 kb on - strand, within Psyr_4422 at 5287.491 kb on - strand, within Psyr_4422 at 5287.491 kb on - strand, within Psyr_4422 at 5287.491 kb on - strand, within Psyr_4422 at 5287.539 kb on - strand, within Psyr_4422 at 5287.539 kb on - strand, within Psyr_4422 at 5287.689 kb on - strand at 5287.689 kb on - strand at 5287.771 kb on + strand at 5287.771 kb on + strand at 5287.772 kb on - strand at 5287.772 kb on - strand at 5287.772 kb on - strand at 5287.772 kb on - strand at 5288.162 kb on + strand at 5288.162 kb on + strand at 5288.232 kb on - strand at 5288.273 kb on + strand at 5288.357 kb on + strand at 5288.357 kb on + strand at 5288.358 kb on - strand at 5288.358 kb on - strand at 5288.390 kb on + strand, within Psyr_4424 at 5288.390 kb on + strand, within Psyr_4424 at 5288.391 kb on - strand, within Psyr_4424 at 5288.464 kb on + strand, within Psyr_4424 at 5288.465 kb on - strand, within Psyr_4424 at 5288.465 kb on - strand, within Psyr_4424 at 5288.468 kb on + strand, within Psyr_4424 at 5288.468 kb on + strand, within Psyr_4424 at 5288.469 kb on - strand, within Psyr_4424 at 5288.493 kb on - strand, within Psyr_4424
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Gossypol-Acetic Acid Complex 10 mM remove 5,286,307 + +0.1 5,286,307 + +0.2 5,286,307 + +0.4 5,286,307 + +1.3 5,286,309 + -0.4 5,286,309 + -1.4 5,286,309 + +0.7 5,286,309 + +1.1 5,286,309 + -0.0 5,286,311 + -0.8 5,286,321 + +0.3 5,286,321 + +1.5 5,286,321 + +0.0 5,286,376 - -0.7 5,286,376 - +0.1 5,286,376 - -0.9 5,286,376 - +0.1 5,286,376 - -0.5 5,286,376 - -2.2 5,286,376 - +0.6 5,286,376 - -0.3 5,286,376 - +0.0 5,286,678 + +0.5 5,286,734 + Psyr_4421 0.17 +0.1 5,286,734 + Psyr_4421 0.17 +1.4 5,286,735 - Psyr_4421 0.17 +0.5 5,286,735 - Psyr_4421 0.17 +1.0 5,286,735 - Psyr_4421 0.17 +0.3 5,286,735 - Psyr_4421 0.17 -1.2 5,286,736 + Psyr_4421 0.17 +1.3 5,286,854 + Psyr_4421 0.43 +1.1 5,286,864 + Psyr_4421 0.45 +2.3 5,286,864 + Psyr_4421 0.45 -0.6 5,286,864 + Psyr_4421 0.45 +0.8 5,286,864 + Psyr_4421 0.45 -0.1 5,286,864 + Psyr_4421 0.45 +1.1 5,286,865 - Psyr_4421 0.45 -0.5 5,286,865 - Psyr_4421 0.45 +0.3 5,286,865 - Psyr_4421 0.45 -0.4 5,286,865 - Psyr_4421 0.45 -0.8 5,286,877 - Psyr_4421 0.48 +1.2 5,286,888 - Psyr_4421 0.50 -0.3 5,286,924 + Psyr_4421 0.58 -1.4 5,286,924 + Psyr_4421 0.58 -0.1 5,286,925 - Psyr_4421 0.58 +0.3 5,286,936 + Psyr_4421 0.61 -1.7 5,287,048 - Psyr_4421 0.85 -0.3 5,287,051 + Psyr_4421 0.86 +0.9 5,287,051 + Psyr_4421 0.86 +0.0 5,287,052 - Psyr_4421 0.86 -1.2 5,287,052 - Psyr_4421 0.86 -0.0 5,287,127 + +1.6 5,287,127 + +1.1 5,287,127 + +0.0 5,287,127 + +0.7 5,287,127 + +1.0 5,287,127 + +1.5 5,287,127 + +0.9 5,287,127 + +1.0 5,287,128 - -0.2 5,287,128 - +0.4 5,287,128 - +0.6 5,287,128 - +1.5 5,287,129 + +0.9 5,287,129 + +0.7 5,287,129 + +0.7 5,287,129 + +0.6 5,287,129 + +1.2 5,287,129 + +0.4 5,287,129 + +1.3 5,287,130 - -0.5 5,287,130 - -1.0 5,287,130 - -0.1 5,287,130 - -1.3 5,287,130 - -0.6 5,287,130 - -1.2 5,287,130 - +0.0 5,287,130 - -0.3 5,287,130 - -2.4 5,287,130 - -0.3 5,287,130 - +0.7 5,287,130 - -0.4 5,287,130 - +1.3 5,287,218 + -0.3 5,287,218 + -0.5 5,287,219 - -0.6 5,287,219 - -1.4 5,287,219 - +0.3 5,287,324 + Psyr_4422 0.14 +0.1 5,287,324 + Psyr_4422 0.14 -3.1 5,287,324 + Psyr_4422 0.14 -0.7 5,287,324 + Psyr_4422 0.14 -0.3 5,287,324 + Psyr_4422 0.14 -0.1 5,287,325 - Psyr_4422 0.15 -2.2 5,287,325 - Psyr_4422 0.15 -1.0 5,287,325 - Psyr_4422 0.15 -1.7 5,287,325 - Psyr_4422 0.15 -0.7 5,287,325 - Psyr_4422 0.15 -0.7 5,287,325 - Psyr_4422 0.15 -1.2 5,287,325 - Psyr_4422 0.15 -1.2 5,287,325 - Psyr_4422 0.15 -0.8 5,287,399 + Psyr_4422 0.31 -1.4 5,287,400 - Psyr_4422 0.31 -0.3 5,287,400 - Psyr_4422 0.31 -2.6 5,287,490 + Psyr_4422 0.50 -0.0 5,287,490 + Psyr_4422 0.50 +0.4 5,287,490 + Psyr_4422 0.50 -1.2 5,287,490 + Psyr_4422 0.50 +0.3 5,287,490 + Psyr_4422 0.50 -0.7 5,287,490 + Psyr_4422 0.50 -1.5 5,287,490 + Psyr_4422 0.50 +0.1 5,287,491 - Psyr_4422 0.50 -1.7 5,287,491 - Psyr_4422 0.50 +1.3 5,287,491 - Psyr_4422 0.50 -1.0 5,287,491 - Psyr_4422 0.50 -1.5 5,287,491 - Psyr_4422 0.50 -1.5 5,287,491 - Psyr_4422 0.50 -1.0 5,287,491 - Psyr_4422 0.50 +0.5 5,287,491 - Psyr_4422 0.50 -1.0 5,287,491 - Psyr_4422 0.50 -0.5 5,287,491 - Psyr_4422 0.50 -1.4 5,287,491 - Psyr_4422 0.50 -1.9 5,287,539 - Psyr_4422 0.61 -0.3 5,287,539 - Psyr_4422 0.61 -0.5 5,287,689 - +0.3 5,287,689 - -1.0 5,287,771 + -0.9 5,287,771 + +0.1 5,287,772 - -1.4 5,287,772 - +1.3 5,287,772 - +0.3 5,287,772 - +0.1 5,288,162 + +1.5 5,288,162 + +0.3 5,288,232 - -0.4 5,288,273 + -0.7 5,288,357 + -1.0 5,288,357 + -3.3 5,288,358 - +1.3 5,288,358 - -1.5 5,288,390 + Psyr_4424 0.10 -0.3 5,288,390 + Psyr_4424 0.10 -1.4 5,288,391 - Psyr_4424 0.10 -2.3 5,288,464 + Psyr_4424 0.16 -0.9 5,288,465 - Psyr_4424 0.16 -3.0 5,288,465 - Psyr_4424 0.16 -1.6 5,288,468 + Psyr_4424 0.16 +0.3 5,288,468 + Psyr_4424 0.16 +0.5 5,288,469 - Psyr_4424 0.16 +0.3 5,288,493 - Psyr_4424 0.18 -1.5
Or see this region's nucleotide sequence