Experiment: KB with Gossypol-Acetic Acid Complex 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4061 and Psyr_4062 are separated by 130 nucleotides Psyr_4062 and Psyr_4063 are separated by 226 nucleotides Psyr_4063 and Psyr_4064 are separated by 61 nucleotides
Psyr_4061: Psyr_4061 - imelysin, Metallo peptidase, MEROPS family M75, at 4,844,672 to 4,846,048
_4061
Psyr_4062: Psyr_4062 - Pyridoxamine 5'-phosphate oxidase-related protein, at 4,846,179 to 4,846,808
_4062
Psyr_4063: Psyr_4063 - Protein of unknown function DUF1111, at 4,847,035 to 4,848,462
_4063
Psyr_4064: Psyr_4064 - lipoprotein, putative, at 4,848,524 to 4,849,588
_4064
Position (kb) 4847
4848
4849 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 4846.183 kb on + strand at 4846.183 kb on + strand at 4846.183 kb on + strand at 4846.183 kb on + strand at 4846.184 kb on - strand at 4846.184 kb on - strand at 4846.184 kb on - strand at 4846.184 kb on - strand at 4846.184 kb on - strand at 4846.184 kb on - strand at 4846.184 kb on - strand at 4846.184 kb on - strand at 4846.190 kb on + strand at 4846.223 kb on - strand at 4846.354 kb on + strand, within Psyr_4062 at 4846.355 kb on - strand, within Psyr_4062 at 4846.441 kb on - strand, within Psyr_4062 at 4846.570 kb on + strand, within Psyr_4062 at 4846.570 kb on + strand, within Psyr_4062 at 4846.694 kb on - strand, within Psyr_4062 at 4846.750 kb on + strand at 4846.750 kb on + strand at 4846.750 kb on + strand at 4846.750 kb on + strand at 4846.750 kb on + strand at 4846.750 kb on + strand at 4846.750 kb on + strand at 4846.751 kb on - strand at 4846.835 kb on + strand at 4846.835 kb on + strand at 4846.835 kb on + strand at 4846.835 kb on + strand at 4846.835 kb on + strand at 4846.835 kb on + strand at 4846.835 kb on + strand at 4846.836 kb on - strand at 4846.836 kb on - strand at 4846.836 kb on - strand at 4846.836 kb on - strand at 4846.836 kb on - strand at 4846.889 kb on - strand at 4846.889 kb on - strand at 4846.889 kb on - strand at 4846.992 kb on + strand at 4846.992 kb on + strand at 4846.993 kb on - strand at 4847.034 kb on + strand at 4847.035 kb on - strand at 4847.035 kb on - strand at 4847.035 kb on - strand at 4847.035 kb on - strand at 4847.035 kb on - strand at 4847.054 kb on + strand at 4847.442 kb on + strand, within Psyr_4063 at 4847.443 kb on - strand, within Psyr_4063 at 4847.443 kb on - strand, within Psyr_4063 at 4847.444 kb on + strand, within Psyr_4063 at 4847.445 kb on - strand, within Psyr_4063 at 4847.445 kb on - strand, within Psyr_4063 at 4847.445 kb on - strand, within Psyr_4063 at 4847.445 kb on - strand, within Psyr_4063 at 4847.445 kb on - strand, within Psyr_4063 at 4847.543 kb on - strand, within Psyr_4063 at 4847.543 kb on - strand, within Psyr_4063 at 4848.016 kb on + strand, within Psyr_4063 at 4848.016 kb on + strand, within Psyr_4063 at 4848.016 kb on + strand, within Psyr_4063 at 4848.016 kb on + strand, within Psyr_4063 at 4848.017 kb on - strand, within Psyr_4063 at 4848.017 kb on - strand, within Psyr_4063 at 4848.017 kb on - strand, within Psyr_4063 at 4848.017 kb on - strand, within Psyr_4063 at 4848.511 kb on + strand at 4848.511 kb on + strand at 4848.512 kb on - strand at 4848.644 kb on + strand, within Psyr_4064 at 4848.644 kb on + strand, within Psyr_4064 at 4848.644 kb on + strand, within Psyr_4064 at 4848.644 kb on + strand, within Psyr_4064 at 4848.645 kb on - strand, within Psyr_4064 at 4848.645 kb on - strand, within Psyr_4064 at 4848.819 kb on + strand, within Psyr_4064 at 4848.819 kb on + strand, within Psyr_4064 at 4848.820 kb on - strand, within Psyr_4064 at 4848.820 kb on - strand, within Psyr_4064 at 4848.820 kb on - strand, within Psyr_4064 at 4848.820 kb on - strand, within Psyr_4064 at 4848.944 kb on + strand, within Psyr_4064 at 4848.950 kb on + strand, within Psyr_4064 at 4848.950 kb on + strand, within Psyr_4064 at 4848.950 kb on + strand, within Psyr_4064 at 4848.950 kb on + strand, within Psyr_4064 at 4848.950 kb on + strand, within Psyr_4064 at 4848.950 kb on + strand, within Psyr_4064 at 4848.950 kb on + strand, within Psyr_4064 at 4848.950 kb on + strand, within Psyr_4064 at 4848.950 kb on + strand, within Psyr_4064 at 4848.950 kb on + strand, within Psyr_4064 at 4848.950 kb on + strand, within Psyr_4064 at 4848.950 kb on + strand, within Psyr_4064 at 4848.951 kb on - strand, within Psyr_4064 at 4848.951 kb on - strand, within Psyr_4064 at 4848.951 kb on - strand, within Psyr_4064 at 4848.951 kb on - strand, within Psyr_4064 at 4848.951 kb on - strand, within Psyr_4064 at 4848.951 kb on - strand, within Psyr_4064 at 4848.951 kb on - strand, within Psyr_4064 at 4848.951 kb on - strand, within Psyr_4064 at 4848.951 kb on - strand, within Psyr_4064 at 4848.951 kb on - strand, within Psyr_4064 at 4848.951 kb on - strand, within Psyr_4064 at 4848.951 kb on - strand, within Psyr_4064 at 4848.951 kb on - strand, within Psyr_4064
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Gossypol-Acetic Acid Complex 10 mM remove 4,846,183 + -0.1 4,846,183 + -1.5 4,846,183 + -0.4 4,846,183 + -0.3 4,846,184 - +0.8 4,846,184 - +0.5 4,846,184 - -0.2 4,846,184 - +0.2 4,846,184 - +0.4 4,846,184 - -0.1 4,846,184 - -1.1 4,846,184 - -0.3 4,846,190 + +0.2 4,846,223 - -1.0 4,846,354 + Psyr_4062 0.28 -0.6 4,846,355 - Psyr_4062 0.28 +0.4 4,846,441 - Psyr_4062 0.42 -0.4 4,846,570 + Psyr_4062 0.62 +0.3 4,846,570 + Psyr_4062 0.62 +0.5 4,846,694 - Psyr_4062 0.82 +0.3 4,846,750 + +1.0 4,846,750 + -0.2 4,846,750 + -2.1 4,846,750 + +0.7 4,846,750 + -1.0 4,846,750 + +0.4 4,846,750 + -0.3 4,846,751 - -0.7 4,846,835 + +2.1 4,846,835 + -0.6 4,846,835 + -1.8 4,846,835 + -0.6 4,846,835 + -0.6 4,846,835 + -1.6 4,846,835 + +0.8 4,846,836 - +0.7 4,846,836 - +0.6 4,846,836 - +0.1 4,846,836 - -0.0 4,846,836 - +1.2 4,846,889 - +0.2 4,846,889 - -1.4 4,846,889 - -2.5 4,846,992 + -1.5 4,846,992 + +1.4 4,846,993 - +2.5 4,847,034 + +0.1 4,847,035 - -0.2 4,847,035 - -0.7 4,847,035 - -1.5 4,847,035 - -1.2 4,847,035 - -0.4 4,847,054 + -0.8 4,847,442 + Psyr_4063 0.29 -1.9 4,847,443 - Psyr_4063 0.29 -1.1 4,847,443 - Psyr_4063 0.29 -0.7 4,847,444 + Psyr_4063 0.29 +0.1 4,847,445 - Psyr_4063 0.29 -0.4 4,847,445 - Psyr_4063 0.29 -0.8 4,847,445 - Psyr_4063 0.29 -1.1 4,847,445 - Psyr_4063 0.29 -0.3 4,847,445 - Psyr_4063 0.29 +0.5 4,847,543 - Psyr_4063 0.36 -0.8 4,847,543 - Psyr_4063 0.36 -1.4 4,848,016 + Psyr_4063 0.69 -1.7 4,848,016 + Psyr_4063 0.69 -1.4 4,848,016 + Psyr_4063 0.69 -0.4 4,848,016 + Psyr_4063 0.69 -0.1 4,848,017 - Psyr_4063 0.69 -0.6 4,848,017 - Psyr_4063 0.69 +0.6 4,848,017 - Psyr_4063 0.69 -1.6 4,848,017 - Psyr_4063 0.69 +0.1 4,848,511 + -1.2 4,848,511 + +0.3 4,848,512 - +0.1 4,848,644 + Psyr_4064 0.11 -1.8 4,848,644 + Psyr_4064 0.11 -0.8 4,848,644 + Psyr_4064 0.11 +0.5 4,848,644 + Psyr_4064 0.11 -0.6 4,848,645 - Psyr_4064 0.11 +0.3 4,848,645 - Psyr_4064 0.11 +1.2 4,848,819 + Psyr_4064 0.28 -1.6 4,848,819 + Psyr_4064 0.28 +0.7 4,848,820 - Psyr_4064 0.28 -2.4 4,848,820 - Psyr_4064 0.28 +0.2 4,848,820 - Psyr_4064 0.28 -0.3 4,848,820 - Psyr_4064 0.28 -0.7 4,848,944 + Psyr_4064 0.39 -1.2 4,848,950 + Psyr_4064 0.40 +0.8 4,848,950 + Psyr_4064 0.40 -0.5 4,848,950 + Psyr_4064 0.40 -0.4 4,848,950 + Psyr_4064 0.40 -0.9 4,848,950 + Psyr_4064 0.40 -0.4 4,848,950 + Psyr_4064 0.40 -0.9 4,848,950 + Psyr_4064 0.40 -0.4 4,848,950 + Psyr_4064 0.40 +2.8 4,848,950 + Psyr_4064 0.40 -1.4 4,848,950 + Psyr_4064 0.40 -0.4 4,848,950 + Psyr_4064 0.40 -0.5 4,848,950 + Psyr_4064 0.40 +1.0 4,848,951 - Psyr_4064 0.40 -1.4 4,848,951 - Psyr_4064 0.40 -1.1 4,848,951 - Psyr_4064 0.40 -2.0 4,848,951 - Psyr_4064 0.40 -1.1 4,848,951 - Psyr_4064 0.40 -0.5 4,848,951 - Psyr_4064 0.40 -0.8 4,848,951 - Psyr_4064 0.40 -0.4 4,848,951 - Psyr_4064 0.40 -1.4 4,848,951 - Psyr_4064 0.40 -0.6 4,848,951 - Psyr_4064 0.40 +0.1 4,848,951 - Psyr_4064 0.40 +1.0 4,848,951 - Psyr_4064 0.40 +0.2 4,848,951 - Psyr_4064 0.40 -0.6
Or see this region's nucleotide sequence