Experiment: KB with Gossypol-Acetic Acid Complex 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4060 and Psyr_4061 are separated by 180 nucleotides Psyr_4061 and Psyr_4062 are separated by 130 nucleotides Psyr_4062 and Psyr_4063 are separated by 226 nucleotides
Psyr_4060: Psyr_4060 - diguanylate cyclase/phosphodiesterase, at 4,842,374 to 4,844,491
_4060
Psyr_4061: Psyr_4061 - imelysin, Metallo peptidase, MEROPS family M75, at 4,844,672 to 4,846,048
_4061
Psyr_4062: Psyr_4062 - Pyridoxamine 5'-phosphate oxidase-related protein, at 4,846,179 to 4,846,808
_4062
Psyr_4063: Psyr_4063 - Protein of unknown function DUF1111, at 4,847,035 to 4,848,462
_4063
Position (kb) 4844
4845
4846
4847 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 4843.755 kb on - strand, within Psyr_4060 at 4843.755 kb on - strand, within Psyr_4060 at 4843.755 kb on - strand, within Psyr_4060 at 4843.755 kb on - strand, within Psyr_4060 at 4843.763 kb on + strand, within Psyr_4060 at 4843.764 kb on - strand, within Psyr_4060 at 4843.764 kb on - strand, within Psyr_4060 at 4843.860 kb on + strand, within Psyr_4060 at 4843.860 kb on + strand, within Psyr_4060 at 4843.860 kb on + strand, within Psyr_4060 at 4843.860 kb on + strand, within Psyr_4060 at 4843.860 kb on + strand, within Psyr_4060 at 4843.860 kb on + strand, within Psyr_4060 at 4843.860 kb on + strand, within Psyr_4060 at 4843.860 kb on + strand, within Psyr_4060 at 4843.860 kb on + strand, within Psyr_4060 at 4843.860 kb on + strand, within Psyr_4060 at 4843.860 kb on + strand, within Psyr_4060 at 4843.860 kb on + strand, within Psyr_4060 at 4843.861 kb on - strand, within Psyr_4060 at 4843.861 kb on - strand, within Psyr_4060 at 4843.861 kb on - strand, within Psyr_4060 at 4844.052 kb on - strand, within Psyr_4060 at 4844.110 kb on + strand, within Psyr_4060 at 4844.110 kb on + strand, within Psyr_4060 at 4844.110 kb on + strand, within Psyr_4060 at 4844.110 kb on + strand, within Psyr_4060 at 4844.111 kb on - strand, within Psyr_4060 at 4844.111 kb on - strand, within Psyr_4060 at 4844.111 kb on - strand, within Psyr_4060 at 4844.111 kb on - strand, within Psyr_4060 at 4844.111 kb on - strand, within Psyr_4060 at 4844.205 kb on - strand, within Psyr_4060 at 4844.284 kb on + strand at 4844.284 kb on + strand at 4844.284 kb on + strand at 4844.285 kb on - strand at 4844.285 kb on - strand at 4844.285 kb on - strand at 4844.285 kb on - strand at 4844.287 kb on + strand at 4844.372 kb on + strand at 4844.372 kb on + strand at 4844.372 kb on + strand at 4844.372 kb on + strand at 4844.372 kb on + strand at 4844.372 kb on + strand at 4844.372 kb on + strand at 4844.372 kb on + strand at 4844.373 kb on - strand at 4844.373 kb on - strand at 4844.373 kb on - strand at 4844.373 kb on - strand at 4844.373 kb on - strand at 4844.373 kb on - strand at 4844.373 kb on - strand at 4844.373 kb on - strand at 4844.373 kb on - strand at 4844.408 kb on + strand at 4844.409 kb on - strand at 4844.415 kb on - strand at 4844.451 kb on - strand at 4844.451 kb on - strand at 4844.451 kb on - strand at 4844.451 kb on - strand at 4844.540 kb on + strand at 4844.540 kb on + strand at 4844.540 kb on + strand at 4844.540 kb on + strand at 4844.540 kb on + strand at 4844.541 kb on - strand at 4844.541 kb on - strand at 4844.680 kb on + strand at 4844.681 kb on - strand at 4844.681 kb on - strand at 4844.681 kb on - strand at 4844.699 kb on - strand at 4844.716 kb on + strand at 4844.717 kb on - strand at 4844.894 kb on + strand at 4844.894 kb on + strand, within Psyr_4061 at 4844.895 kb on - strand, within Psyr_4061 at 4844.895 kb on - strand, within Psyr_4061 at 4844.895 kb on - strand, within Psyr_4061 at 4844.895 kb on - strand, within Psyr_4061 at 4844.895 kb on - strand, within Psyr_4061 at 4845.039 kb on - strand, within Psyr_4061 at 4845.039 kb on - strand, within Psyr_4061 at 4845.039 kb on - strand, within Psyr_4061 at 4845.134 kb on + strand, within Psyr_4061 at 4845.134 kb on + strand, within Psyr_4061 at 4845.134 kb on + strand, within Psyr_4061 at 4845.134 kb on + strand, within Psyr_4061 at 4845.149 kb on + strand, within Psyr_4061 at 4845.440 kb on + strand, within Psyr_4061 at 4845.441 kb on - strand, within Psyr_4061 at 4845.521 kb on + strand, within Psyr_4061 at 4845.521 kb on + strand, within Psyr_4061 at 4845.677 kb on - strand, within Psyr_4061 at 4845.698 kb on + strand, within Psyr_4061 at 4845.699 kb on - strand, within Psyr_4061 at 4845.699 kb on - strand, within Psyr_4061 at 4845.725 kb on + strand, within Psyr_4061 at 4845.726 kb on - strand, within Psyr_4061 at 4845.737 kb on + strand, within Psyr_4061 at 4846.183 kb on + strand at 4846.183 kb on + strand at 4846.183 kb on + strand at 4846.183 kb on + strand at 4846.184 kb on - strand at 4846.184 kb on - strand at 4846.184 kb on - strand at 4846.184 kb on - strand at 4846.184 kb on - strand at 4846.184 kb on - strand at 4846.184 kb on - strand at 4846.184 kb on - strand at 4846.190 kb on + strand at 4846.223 kb on - strand at 4846.354 kb on + strand, within Psyr_4062 at 4846.355 kb on - strand, within Psyr_4062 at 4846.441 kb on - strand, within Psyr_4062 at 4846.570 kb on + strand, within Psyr_4062 at 4846.570 kb on + strand, within Psyr_4062 at 4846.694 kb on - strand, within Psyr_4062 at 4846.750 kb on + strand at 4846.750 kb on + strand at 4846.750 kb on + strand at 4846.750 kb on + strand at 4846.750 kb on + strand at 4846.750 kb on + strand at 4846.750 kb on + strand at 4846.751 kb on - strand at 4846.835 kb on + strand at 4846.835 kb on + strand at 4846.835 kb on + strand at 4846.835 kb on + strand at 4846.835 kb on + strand at 4846.835 kb on + strand at 4846.835 kb on + strand at 4846.836 kb on - strand at 4846.836 kb on - strand at 4846.836 kb on - strand at 4846.836 kb on - strand at 4846.836 kb on - strand at 4846.889 kb on - strand at 4846.889 kb on - strand at 4846.889 kb on - strand at 4846.992 kb on + strand at 4846.992 kb on + strand at 4846.993 kb on - strand at 4847.034 kb on + strand at 4847.035 kb on - strand at 4847.035 kb on - strand at 4847.035 kb on - strand at 4847.035 kb on - strand at 4847.035 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Gossypol-Acetic Acid Complex 10 mM remove 4,843,755 - Psyr_4060 0.65 -0.5 4,843,755 - Psyr_4060 0.65 -0.3 4,843,755 - Psyr_4060 0.65 -0.4 4,843,755 - Psyr_4060 0.65 +0.7 4,843,763 + Psyr_4060 0.66 -0.3 4,843,764 - Psyr_4060 0.66 +0.2 4,843,764 - Psyr_4060 0.66 +0.1 4,843,860 + Psyr_4060 0.70 -1.2 4,843,860 + Psyr_4060 0.70 -0.1 4,843,860 + Psyr_4060 0.70 +0.3 4,843,860 + Psyr_4060 0.70 +0.5 4,843,860 + Psyr_4060 0.70 +0.1 4,843,860 + Psyr_4060 0.70 +0.2 4,843,860 + Psyr_4060 0.70 +0.2 4,843,860 + Psyr_4060 0.70 +1.3 4,843,860 + Psyr_4060 0.70 -1.1 4,843,860 + Psyr_4060 0.70 -0.0 4,843,860 + Psyr_4060 0.70 -0.1 4,843,860 + Psyr_4060 0.70 +0.2 4,843,861 - Psyr_4060 0.70 +0.4 4,843,861 - Psyr_4060 0.70 -0.4 4,843,861 - Psyr_4060 0.70 +0.9 4,844,052 - Psyr_4060 0.79 -1.8 4,844,110 + Psyr_4060 0.82 +1.7 4,844,110 + Psyr_4060 0.82 -0.4 4,844,110 + Psyr_4060 0.82 +0.2 4,844,110 + Psyr_4060 0.82 -0.4 4,844,111 - Psyr_4060 0.82 -0.5 4,844,111 - Psyr_4060 0.82 +0.8 4,844,111 - Psyr_4060 0.82 -0.1 4,844,111 - Psyr_4060 0.82 -1.1 4,844,111 - Psyr_4060 0.82 -0.1 4,844,205 - Psyr_4060 0.86 -0.7 4,844,284 + -0.4 4,844,284 + +1.6 4,844,284 + -0.2 4,844,285 - +0.1 4,844,285 - +0.5 4,844,285 - -0.2 4,844,285 - +0.1 4,844,287 + -0.7 4,844,372 + +0.6 4,844,372 + +0.2 4,844,372 + +0.3 4,844,372 + +1.0 4,844,372 + +0.6 4,844,372 + +1.2 4,844,372 + -0.3 4,844,372 + +0.6 4,844,373 - -1.1 4,844,373 - -2.2 4,844,373 - +0.6 4,844,373 - -1.1 4,844,373 - -0.4 4,844,373 - -0.4 4,844,373 - -0.2 4,844,373 - -2.4 4,844,373 - +2.2 4,844,408 + -0.2 4,844,409 - -0.4 4,844,415 - -0.7 4,844,451 - +0.2 4,844,451 - -0.5 4,844,451 - +1.8 4,844,451 - -0.3 4,844,540 + +0.3 4,844,540 + +0.8 4,844,540 + +0.5 4,844,540 + -0.5 4,844,540 + +0.2 4,844,541 - -0.9 4,844,541 - -0.1 4,844,680 + -0.8 4,844,681 - +1.8 4,844,681 - -2.6 4,844,681 - -0.1 4,844,699 - -1.9 4,844,716 + -2.9 4,844,717 - -0.9 4,844,894 + -1.4 4,844,894 + Psyr_4061 0.16 -0.1 4,844,895 - Psyr_4061 0.16 +0.3 4,844,895 - Psyr_4061 0.16 -1.5 4,844,895 - Psyr_4061 0.16 +0.0 4,844,895 - Psyr_4061 0.16 -1.6 4,844,895 - Psyr_4061 0.16 -1.4 4,845,039 - Psyr_4061 0.27 +0.5 4,845,039 - Psyr_4061 0.27 -3.0 4,845,039 - Psyr_4061 0.27 +0.0 4,845,134 + Psyr_4061 0.34 -2.6 4,845,134 + Psyr_4061 0.34 +0.6 4,845,134 + Psyr_4061 0.34 +0.7 4,845,134 + Psyr_4061 0.34 +0.6 4,845,149 + Psyr_4061 0.35 -0.7 4,845,440 + Psyr_4061 0.56 -2.9 4,845,441 - Psyr_4061 0.56 -0.7 4,845,521 + Psyr_4061 0.62 -0.4 4,845,521 + Psyr_4061 0.62 -0.7 4,845,677 - Psyr_4061 0.73 -0.8 4,845,698 + Psyr_4061 0.75 -0.7 4,845,699 - Psyr_4061 0.75 -1.4 4,845,699 - Psyr_4061 0.75 +1.2 4,845,725 + Psyr_4061 0.76 -1.1 4,845,726 - Psyr_4061 0.77 -0.4 4,845,737 + Psyr_4061 0.77 -0.4 4,846,183 + -0.1 4,846,183 + -1.5 4,846,183 + -0.4 4,846,183 + -0.3 4,846,184 - +0.8 4,846,184 - +0.5 4,846,184 - -0.2 4,846,184 - +0.2 4,846,184 - +0.4 4,846,184 - -0.1 4,846,184 - -1.1 4,846,184 - -0.3 4,846,190 + +0.2 4,846,223 - -1.0 4,846,354 + Psyr_4062 0.28 -0.6 4,846,355 - Psyr_4062 0.28 +0.4 4,846,441 - Psyr_4062 0.42 -0.4 4,846,570 + Psyr_4062 0.62 +0.3 4,846,570 + Psyr_4062 0.62 +0.5 4,846,694 - Psyr_4062 0.82 +0.3 4,846,750 + +1.0 4,846,750 + -0.2 4,846,750 + -2.1 4,846,750 + +0.7 4,846,750 + -1.0 4,846,750 + +0.4 4,846,750 + -0.3 4,846,751 - -0.7 4,846,835 + +2.1 4,846,835 + -0.6 4,846,835 + -1.8 4,846,835 + -0.6 4,846,835 + -0.6 4,846,835 + -1.6 4,846,835 + +0.8 4,846,836 - +0.7 4,846,836 - +0.6 4,846,836 - +0.1 4,846,836 - -0.0 4,846,836 - +1.2 4,846,889 - +0.2 4,846,889 - -1.4 4,846,889 - -2.5 4,846,992 + -1.5 4,846,992 + +1.4 4,846,993 - +2.5 4,847,034 + +0.1 4,847,035 - -0.2 4,847,035 - -0.7 4,847,035 - -1.5 4,847,035 - -1.2 4,847,035 - -0.4
Or see this region's nucleotide sequence