Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3375

Experiment: carbon source Sucrose 0.25mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	carbon source Sucrose 0.25mM
3,761,444	+		Pf1N1B4_3374	0.43	-2.8
3,761,444	+		Pf1N1B4_3374	0.43	-1.2
3,761,445	-		Pf1N1B4_3374	0.43	-2.4
3,761,445	-		Pf1N1B4_3374	0.43	+0.1
3,761,445	-				+2.0
3,761,544	+				-1.5
3,761,544	+		Pf1N1B4_3374	0.53	-1.5
3,761,544	+		Pf1N1B4_3374	0.53	+2.7
3,761,545	-		Pf1N1B4_3374	0.53	+2.1
3,761,595	-		Pf1N1B4_3374	0.58	+0.6
3,761,596	+				-1.9
3,761,597	-		Pf1N1B4_3374	0.58	+0.6
3,761,843	-		Pf1N1B4_3374	0.84	-0.7
3,761,843	-		Pf1N1B4_3374	0.84	+1.3
3,762,067	-				+1.1
3,762,069	+				-1.9
3,762,069	+				-0.1
3,762,070	-				-2.1
3,762,114	+				+0.2
3,762,216	-				+2.6
3,762,238	+				-0.1
3,762,239	-				+2.6
3,762,239	-				+3.4
3,762,284	-				+3.2
3,762,284	-				+0.5
3,762,287	+				-1.1
3,762,287	+				-2.1
3,762,287	+				-0.1
3,762,288	-				+3.0
3,762,288	-				+1.2
3,762,288	-				+2.4
3,762,288	-				+1.6
3,762,288	-				+0.7
3,762,288	-				+2.5
3,762,288	-				+3.0
3,762,288	-				+2.5
3,762,291	-				+2.5
3,762,291	-				+1.8
3,762,291	-				+1.0
3,762,303	+				+2.7
3,762,303	+				+1.9
3,762,303	+				+2.0
3,762,303	+				+2.9
3,762,303	+				+2.8
3,762,304	-				+2.6
3,762,304	-				-0.1
3,762,304	-				+1.2
3,762,304	-				+2.7
3,762,304	-				+2.0
3,762,304	-				+2.3
3,762,304	-				+1.4
3,762,304	-				+2.3
3,762,366	+				+3.0
3,762,366	+				+2.7
3,762,366	+				+1.3
3,762,366	+				+2.1
3,762,366	+				-1.9
3,762,366	+				+3.0
3,762,366	+				+1.5
3,762,366	+				-1.4
3,762,366	+				+2.8
3,762,366	+				+2.5
3,762,366	+				+1.4
3,762,366	+				+3.7
3,762,366	+				+0.6
3,762,367	-				+1.0
3,762,367	-				+2.9
3,762,367	-				+1.7
3,762,367	-				+2.3
3,762,367	-				+2.7
3,762,367	-				+2.0
3,762,367	-				+1.6
3,762,367	-				+0.1
3,762,367	-				+2.8
3,762,367	-				-0.5
3,762,367	-				+3.2
3,762,367	-				+2.3
3,762,367	-				+1.1
3,762,367	-				+2.8
3,762,367	-				+3.3
3,762,441	+		Pf1N1B4_3375	0.14	+2.6
3,762,441	+		Pf1N1B4_3375	0.14	+0.4
3,762,441	+		Pf1N1B4_3375	0.14	+2.4
3,762,441	+		Pf1N1B4_3375	0.14	+0.9
3,762,441	+		Pf1N1B4_3375	0.14	+2.9
3,762,441	+		Pf1N1B4_3375	0.14	-0.1
3,762,441	+		Pf1N1B4_3375	0.14	+0.5
3,762,441	+		Pf1N1B4_3375	0.14	+2.5
3,762,441	+		Pf1N1B4_3375	0.14	+1.6
3,762,441	+		Pf1N1B4_3375	0.14	+2.3
3,762,441	+		Pf1N1B4_3375	0.14	+1.9
3,762,441	+		Pf1N1B4_3375	0.14	+0.8
3,762,441	+				+1.0
3,762,442	-		Pf1N1B4_3375	0.14	+3.2
3,762,442	-		Pf1N1B4_3375	0.14	+3.3
3,762,442	-		Pf1N1B4_3375	0.14	+2.2
3,762,442	-		Pf1N1B4_3375	0.14	+2.0
3,762,442	-		Pf1N1B4_3375	0.14	+4.0
3,762,442	-		Pf1N1B4_3375	0.14	+2.8
3,762,442	-		Pf1N1B4_3375	0.14	+3.4
3,762,442	-		Pf1N1B4_3375	0.14	+1.5
3,762,442	-				+0.5
3,762,442	-		Pf1N1B4_3375	0.14	+1.7
3,762,442	-		Pf1N1B4_3375	0.14	+1.9
3,762,442	-				-1.0
3,762,442	-		Pf1N1B4_3375	0.14	+3.6
3,762,442	-		Pf1N1B4_3375	0.14	+2.0
3,762,442	-		Pf1N1B4_3375	0.14	+2.9
3,762,443	+		Pf1N1B4_3375	0.15	-2.5
3,762,443	+		Pf1N1B4_3375	0.15	+0.9
3,762,443	+				-0.0
3,762,444	-		Pf1N1B4_3375	0.15	+2.3
3,762,444	-		Pf1N1B4_3375	0.15	+2.9
3,762,456	+		Pf1N1B4_3375	0.16	+2.1
3,762,456	+		Pf1N1B4_3375	0.16	+3.1
3,762,456	+		Pf1N1B4_3375	0.16	+2.2
3,762,456	+		Pf1N1B4_3375	0.16	+2.2
3,762,456	+		Pf1N1B4_3375	0.16	+2.2
3,762,456	+		Pf1N1B4_3375	0.16	+0.8
3,762,456	+		Pf1N1B4_3375	0.16	+3.7
3,762,456	+		Pf1N1B4_3375	0.16	+0.9
3,762,456	+		Pf1N1B4_3375	0.16	+1.4
3,762,456	+		Pf1N1B4_3375	0.16	+0.6
3,762,457	-		Pf1N1B4_3375	0.16	+2.4
3,762,457	-		Pf1N1B4_3375	0.16	+2.4
3,762,457	-		Pf1N1B4_3375	0.16	+2.6
3,762,457	-		Pf1N1B4_3375	0.16	+2.9
3,762,457	-		Pf1N1B4_3375	0.16	+2.5
3,762,457	-		Pf1N1B4_3375	0.16	+2.1
3,762,457	-		Pf1N1B4_3375	0.16	+1.5
3,762,486	+		Pf1N1B4_3375	0.19	+1.9
3,762,542	+		Pf1N1B4_3375	0.25	-1.0
3,762,542	+		Pf1N1B4_3375	0.25	+4.2
3,762,542	+		Pf1N1B4_3375	0.25	+1.9
3,762,542	+		Pf1N1B4_3375	0.25	+1.7
3,762,543	-		Pf1N1B4_3375	0.25	+2.7
3,762,543	-		Pf1N1B4_3375	0.25	+2.8
3,762,543	-		Pf1N1B4_3375	0.25	+1.8
3,762,579	+				+3.4
3,762,579	+		Pf1N1B4_3375	0.29	+0.5
3,762,579	+		Pf1N1B4_3375	0.29	+2.8
3,762,580	-		Pf1N1B4_3375	0.29	+2.1
3,762,580	-		Pf1N1B4_3375	0.29	-0.0
3,762,651	+		Pf1N1B4_3375	0.37	+2.3
3,762,652	-		Pf1N1B4_3375	0.37	+3.7
3,762,652	-		Pf1N1B4_3375	0.37	+1.8
3,762,652	-		Pf1N1B4_3375	0.37	+2.6
3,762,663	+		Pf1N1B4_3375	0.38	+2.1
3,762,663	+		Pf1N1B4_3375	0.38	+3.1
3,762,663	+		Pf1N1B4_3375	0.38	+2.3
3,762,879	+		Pf1N1B4_3375	0.61	+3.1
3,762,879	+		Pf1N1B4_3375	0.61	+1.5
3,762,879	+		Pf1N1B4_3375	0.61	+1.6
3,762,880	-		Pf1N1B4_3375	0.61	+2.0
3,762,880	-		Pf1N1B4_3375	0.61	+2.9
3,762,880	-		Pf1N1B4_3375	0.61	+1.5
3,762,880	-		Pf1N1B4_3375	0.61	+2.6
3,762,880	-		Pf1N1B4_3375	0.61	+2.8
3,762,921	+		Pf1N1B4_3375	0.65	+3.5
3,762,921	+		Pf1N1B4_3375	0.65	+2.6
3,762,921	+		Pf1N1B4_3375	0.65	+0.0
3,762,921	+		Pf1N1B4_3375	0.65	+3.3
3,762,921	+		Pf1N1B4_3375	0.65	-1.5
3,762,921	+		Pf1N1B4_3375	0.65	+1.8
3,762,921	+		Pf1N1B4_3375	0.65	+3.3
3,762,921	+		Pf1N1B4_3375	0.65	+2.7
3,762,921	+		Pf1N1B4_3375	0.65	+3.5
3,762,921	+		Pf1N1B4_3375	0.65	+2.4
3,762,921	+		Pf1N1B4_3375	0.65	-0.7
3,762,921	+		Pf1N1B4_3375	0.65	+2.6
3,762,921	+		Pf1N1B4_3375	0.65	+2.4
3,762,922	-		Pf1N1B4_3375	0.66	-0.0
3,762,922	-		Pf1N1B4_3375	0.66	+2.0
3,762,922	-		Pf1N1B4_3375	0.66	+1.2
3,762,922	-		Pf1N1B4_3375	0.66	+0.8
3,762,922	-		Pf1N1B4_3375	0.66	+1.9
3,762,922	-		Pf1N1B4_3375	0.66	+2.0
3,762,922	-		Pf1N1B4_3375	0.66	+0.9
3,762,922	-		Pf1N1B4_3375	0.66	+3.6
3,762,922	-		Pf1N1B4_3375	0.66	+2.9
3,762,922	-		Pf1N1B4_3375	0.66	+3.0
3,762,922	-		Pf1N1B4_3375	0.66	+2.2
3,762,922	-				+2.1
3,762,922	-		Pf1N1B4_3375	0.66	-0.6
3,762,922	-		Pf1N1B4_3375	0.66	-1.8
3,763,101	+		Pf1N1B4_3375	0.85	+1.8
3,763,101	+		Pf1N1B4_3375	0.85	+2.3
3,763,102	-		Pf1N1B4_3375	0.85	+2.2
3,763,163	+				+3.9
3,763,251	+				+1.6
3,763,252	-				+0.7
3,763,252	-				+0.5
3,763,262	-				-0.4
3,763,286	+				+2.5
3,763,286	+				-1.9
3,763,287	-				-1.6
3,763,335	-				+2.3
3,763,335	-				+1.7
3,763,335	-				+2.2
3,763,357	+				-1.3
3,763,358	-				-2.7
3,763,358	-				-2.3
3,763,358	-				+1.1
3,763,422	-				-0.1
3,763,422	-				+0.0
3,763,422	-				+2.4
3,763,447	+				-2.6
3,763,533	-		Pf1N1B4_3376	0.19	-2.1
3,763,633	-		Pf1N1B4_3376	0.29	-2.1
3,763,633	-		Pf1N1B4_3376	0.29	-3.6
3,763,633	-		Pf1N1B4_3376	0.29	+1.8
3,763,827	+		Pf1N1B4_3376	0.50	+0.0
3,763,827	+		Pf1N1B4_3376	0.50	-1.6
3,763,827	+		Pf1N1B4_3376	0.50	-0.1
3,763,827	+		Pf1N1B4_3376	0.50	+0.3
3,763,828	-		Pf1N1B4_3376	0.50	+0.2
3,764,059	+		Pf1N1B4_3376	0.75	+3.4
3,764,060	-		Pf1N1B4_3376	0.75	+1.2
3,764,060	-		Pf1N1B4_3376	0.75	+0.1
3,764,062	+		Pf1N1B4_3376	0.75	+1.7
3,764,062	+		Pf1N1B4_3376	0.75	+0.6
3,764,062	+		Pf1N1B4_3376	0.75	+1.5
3,764,062	+		Pf1N1B4_3376	0.75	-2.2
3,764,063	-		Pf1N1B4_3376	0.75	-1.5
3,764,063	-		Pf1N1B4_3376	0.75	+1.0
3,764,063	-		Pf1N1B4_3376	0.75	-0.0
3,764,063	-		Pf1N1B4_3376	0.75	+4.4
3,764,063	-		Pf1N1B4_3376	0.75	+0.3
3,764,063	-		Pf1N1B4_3376	0.75	-2.3
3,764,063	-		Pf1N1B4_3376	0.75	-1.8
3,764,063	-		Pf1N1B4_3376	0.75	+0.0
3,764,063	-		Pf1N1B4_3376	0.75	+0.4
3,764,087	+		Pf1N1B4_3376	0.78	+0.6
3,764,088	-		Pf1N1B4_3376	0.78	+0.6
3,764,088	-		Pf1N1B4_3376	0.78	-0.9
3,764,097	-		Pf1N1B4_3376	0.79	+1.1