Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3188

Experiment: carbon source Sucrose 0.5mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	carbon source Sucrose 0.5mM
3,569,513	+		Pf1N1B4_3186	0.37	+1.1
3,569,513	+		Pf1N1B4_3186	0.37	-1.3
3,569,514	-		Pf1N1B4_3186	0.38	+1.2
3,569,519	-		Pf1N1B4_3186	0.39	-1.5
3,569,577	+		Pf1N1B4_3186	0.51	-0.9
3,569,577	+		Pf1N1B4_3186	0.51	+1.3
3,569,577	+		Pf1N1B4_3186	0.51	-1.8
3,569,577	+		Pf1N1B4_3186	0.51	-3.7
3,569,577	+		Pf1N1B4_3186	0.51	+0.8
3,569,577	+		Pf1N1B4_3186	0.51	-0.6
3,569,577	+		Pf1N1B4_3186	0.51	-1.5
3,569,577	+		Pf1N1B4_3186	0.51	-1.3
3,569,577	+		Pf1N1B4_3186	0.51	+0.3
3,569,577	+		Pf1N1B4_3186	0.51	-2.6
3,569,577	+		Pf1N1B4_3186	0.51	+0.8
3,569,577	+		Pf1N1B4_3186	0.51	+1.4
3,569,577	+		Pf1N1B4_3186	0.51	-1.3
3,569,577	+		Pf1N1B4_3186	0.51	-2.6
3,569,577	+		Pf1N1B4_3186	0.51	+1.3
3,569,578	-		Pf1N1B4_3186	0.51	+1.2
3,569,578	-		Pf1N1B4_3186	0.51	-3.9
3,569,578	-		Pf1N1B4_3186	0.51	+0.9
3,569,578	-		Pf1N1B4_3186	0.51	+0.3
3,569,578	-		Pf1N1B4_3186	0.51	-1.8
3,569,578	-		Pf1N1B4_3186	0.51	-2.0
3,569,578	-		Pf1N1B4_3186	0.51	+0.9
3,569,578	-		Pf1N1B4_3186	0.51	+0.1
3,569,676	+		Pf1N1B4_3186	0.71	-2.4
3,569,676	+		Pf1N1B4_3186	0.71	+2.5
3,569,793	+				+0.4
3,569,793	+				-1.5
3,569,793	+				+0.6
3,569,793	+				-1.7
3,569,794	-				-1.2
3,569,824	+				-2.1
3,569,825	-				+1.7
3,569,845	+				-0.3
3,569,845	+				+1.0
3,569,845	+				+0.9
3,569,879	+				+0.5
3,569,879	+				+1.1
3,569,880	-				+0.5
3,569,944	+				-0.3
3,570,000	-		Pf1N1B4_3187	0.14	-0.7
3,570,000	-		Pf1N1B4_3187	0.14	+0.1
3,570,000	-		Pf1N1B4_3187	0.14	+2.0
3,570,037	+		Pf1N1B4_3187	0.22	-0.7
3,570,037	+		Pf1N1B4_3187	0.22	+0.7
3,570,038	-		Pf1N1B4_3187	0.22	-1.2
3,570,038	-		Pf1N1B4_3187	0.22	+0.6
3,570,058	-		Pf1N1B4_3187	0.27	+2.0
3,570,261	+		Pf1N1B4_3187	0.69	-0.2
3,570,261	+		Pf1N1B4_3187	0.69	-0.4
3,570,261	+		Pf1N1B4_3187	0.69	-2.5
3,570,261	+		Pf1N1B4_3187	0.69	+0.1
3,570,262	-		Pf1N1B4_3187	0.69	-0.0
3,570,262	-		Pf1N1B4_3187	0.69	+0.3
3,570,262	-		Pf1N1B4_3187	0.69	-0.3
3,570,262	-		Pf1N1B4_3187	0.69	+1.5
3,570,265	+		Pf1N1B4_3187	0.70	+0.2
3,570,266	-		Pf1N1B4_3187	0.70	+2.1
3,570,282	+		Pf1N1B4_3187	0.74	+2.9
3,570,282	+		Pf1N1B4_3187	0.74	+0.4
3,570,282	+		Pf1N1B4_3187	0.74	-1.6
3,570,282	+		Pf1N1B4_3187	0.74	-3.2
3,570,282	+		Pf1N1B4_3187	0.74	-2.8
3,570,282	+		Pf1N1B4_3187	0.74	+2.5
3,570,282	+		Pf1N1B4_3187	0.74	-1.6
3,570,283	-		Pf1N1B4_3187	0.74	-1.5
3,570,283	-				-1.6
3,570,283	-		Pf1N1B4_3187	0.74	+0.7
3,570,283	-		Pf1N1B4_3187	0.74	-0.9
3,570,283	-		Pf1N1B4_3187	0.74	-1.6
3,570,283	-		Pf1N1B4_3187	0.74	-0.2
3,570,283	-		Pf1N1B4_3187	0.74	-1.4
3,570,283	-		Pf1N1B4_3187	0.74	-0.4
3,570,283	-		Pf1N1B4_3187	0.74	-0.5
3,570,286	+		Pf1N1B4_3187	0.74	+0.6
3,570,286	+		Pf1N1B4_3187	0.74	+1.3
3,570,287	-		Pf1N1B4_3187	0.75	-0.4
3,570,287	-		Pf1N1B4_3187	0.75	-2.0
3,570,287	-		Pf1N1B4_3187	0.75	-0.2
3,570,287	-		Pf1N1B4_3187	0.75	-0.4
3,570,346	+		Pf1N1B4_3187	0.87	-0.5
3,570,401	+				+0.5
3,570,401	+				+0.4
3,570,402	-				-2.0
3,570,402	-				+0.1
3,570,402	-				-0.2
3,570,402	-				-2.0
3,570,402	-				+0.7
3,570,402	-				+1.3
3,570,402	-				+1.7
3,570,402	-				-1.9
3,570,402	-				-2.3
3,570,422	+				-2.9
3,570,422	+				-1.7
3,570,423	-				-2.9
3,570,423	-				+1.2
3,570,483	+		Pf1N1B4_3188	0.14	-3.5
3,570,483	+		Pf1N1B4_3188	0.14	+0.5
3,570,484	-		Pf1N1B4_3188	0.14	+0.7
3,570,484	-		Pf1N1B4_3188	0.14	+0.4
3,570,484	-		Pf1N1B4_3188	0.14	-2.5
3,570,485	+				-1.4
3,570,485	+		Pf1N1B4_3188	0.15	-0.7
3,570,485	+		Pf1N1B4_3188	0.15	-1.8
3,570,485	+		Pf1N1B4_3188	0.15	-0.1
3,570,486	-		Pf1N1B4_3188	0.15	+0.8
3,570,486	-		Pf1N1B4_3188	0.15	+1.1
3,570,500	+		Pf1N1B4_3188	0.18	+1.2
3,570,500	+		Pf1N1B4_3188	0.18	-1.4
3,570,500	+		Pf1N1B4_3188	0.18	-1.7
3,570,500	+		Pf1N1B4_3188	0.18	-1.0
3,570,500	+		Pf1N1B4_3188	0.18	+1.6
3,570,501	-		Pf1N1B4_3188	0.18	-0.9
3,570,504	+		Pf1N1B4_3188	0.18	+1.3
3,570,504	+		Pf1N1B4_3188	0.18	-0.3
3,570,505	-		Pf1N1B4_3188	0.19	-0.7
3,570,517	+		Pf1N1B4_3188	0.21	-1.7
3,570,517	+		Pf1N1B4_3188	0.21	+0.5
3,570,517	+		Pf1N1B4_3188	0.21	-1.1
3,570,518	-		Pf1N1B4_3188	0.21	+1.7
3,570,518	-		Pf1N1B4_3188	0.21	-1.9
3,570,518	-		Pf1N1B4_3188	0.21	+2.1
3,570,518	-		Pf1N1B4_3188	0.21	-0.4
3,570,898	-				-1.0
3,570,898	-				+2.4
3,570,898	-				-0.5
3,570,898	-				+0.2
3,570,938	+				-0.7
3,570,961	+				-3.0
3,570,961	+				-2.4
3,570,961	+				-0.5
3,570,961	+				-2.0
3,570,961	+				+0.1
3,570,962	-				+0.2
3,571,085	-				-1.8
3,571,109	+				+0.4
3,571,109	+				+1.6
3,571,109	+				+0.1
3,571,109	+				-1.4
3,571,109	+				+1.1
3,571,109	+				-1.4
3,571,110	-				+0.2
3,571,110	-				+1.7
3,571,110	-				+3.3
3,571,110	-				+1.4
3,571,110	-				+3.6
3,571,110	-				+1.6
3,571,110	-				-1.8
3,571,110	-				+1.7
3,571,119	+				-1.0
3,571,119	+				-1.9
3,571,119	+				-0.6
3,571,119	+				-0.1
3,571,119	+				+1.4
3,571,119	+				-2.0
3,571,119	+				-0.7
3,571,119	+				-0.6
3,571,135	-				-0.4
3,571,135	-				-2.9
3,571,381	+		Pf1N1B4_3189	0.39	-0.9
3,571,381	+		Pf1N1B4_3189	0.39	+1.0
3,571,381	+		Pf1N1B4_3189	0.39	-1.0
3,571,382	-		Pf1N1B4_3189	0.39	-2.0
3,571,382	-				-1.7
3,571,382	-		Pf1N1B4_3189	0.39	-0.6
3,571,533	+		Pf1N1B4_3189	0.60	+0.9
3,571,533	+		Pf1N1B4_3189	0.60	+1.1
3,571,533	+		Pf1N1B4_3189	0.60	+0.4
3,571,533	+		Pf1N1B4_3189	0.60	+1.1
3,571,533	+		Pf1N1B4_3189	0.60	-0.3
3,571,533	+				-0.1
3,571,533	-		Pf1N1B4_3189	0.60	-1.1
3,571,534	-		Pf1N1B4_3189	0.61	-1.4
3,571,625	+		Pf1N1B4_3189	0.74	-2.1
3,571,625	+		Pf1N1B4_3189	0.74	-2.3
3,571,625	+		Pf1N1B4_3189	0.74	-1.5
3,571,625	+		Pf1N1B4_3189	0.74	-0.6
3,571,625	+		Pf1N1B4_3189	0.74	+1.2
3,571,625	+		Pf1N1B4_3189	0.74	+0.9
3,571,626	-				-0.6
3,571,626	-		Pf1N1B4_3189	0.74	-1.1
3,571,670	+		Pf1N1B4_3189	0.80	-1.7
3,571,670	+		Pf1N1B4_3189	0.80	-2.5
3,571,670	+		Pf1N1B4_3189	0.80	-2.8
3,571,671	-		Pf1N1B4_3189	0.80	-1.4
3,571,671	-				-1.1
3,571,671	-		Pf1N1B4_3189	0.80	+1.3
3,571,699	+		Pf1N1B4_3189	0.84	+1.4
3,571,699	+		Pf1N1B4_3189	0.84	-2.5
3,571,699	+		Pf1N1B4_3189	0.84	+1.3
3,571,700	-		Pf1N1B4_3189	0.84	+1.9
3,571,700	-		Pf1N1B4_3189	0.84	-1.8
3,571,700	-		Pf1N1B4_3189	0.84	-0.7
3,571,700	-		Pf1N1B4_3189	0.84	-2.0
3,571,805	+				+0.2
3,571,830	+				+1.3
3,571,830	+				+2.1
3,571,830	+				-1.4
3,571,830	+				-2.1
3,571,830	+				-0.6
3,571,830	+				-0.7
3,571,830	+				-0.2
3,571,831	-				-1.7
3,571,831	-				+1.6
3,571,831	-				+0.7
3,571,831	-				+2.5
3,571,852	+				+1.4
3,571,852	+				-0.4
3,571,852	+				+1.7
3,571,909	+				+1.6
3,571,909	+				+0.4
3,571,909	+				-2.3
3,571,909	+				+0.2
3,571,909	+				+1.7
3,571,909	+				+1.8
3,571,909	+				-0.2