Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2522

Experiment: carbon source Sucrose 1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	carbon source Sucrose 1mM
2,860,204	+		Pf1N1B4_2521	0.36	-2.2
2,860,205	-		Pf1N1B4_2521	0.36	-1.2
2,860,222	+		Pf1N1B4_2521	0.37	+0.8
2,860,222	+		Pf1N1B4_2521	0.37	-0.2
2,860,222	+		Pf1N1B4_2521	0.37	+0.8
2,860,222	+		Pf1N1B4_2521	0.37	-1.1
2,860,222	+		Pf1N1B4_2521	0.37	+0.6
2,860,222	+		Pf1N1B4_2521	0.37	-2.0
2,860,222	+		Pf1N1B4_2521	0.37	+1.0
2,860,222	+		Pf1N1B4_2521	0.37	-1.7
2,860,222	+		Pf1N1B4_2521	0.37	-1.2
2,860,222	+		Pf1N1B4_2521	0.37	-0.4
2,860,223	-		Pf1N1B4_2521	0.38	-1.3
2,860,223	-		Pf1N1B4_2521	0.38	-0.6
2,860,223	-		Pf1N1B4_2521	0.38	-1.1
2,860,225	+				-0.1
2,860,315	+		Pf1N1B4_2521	0.43	-1.3
2,860,315	+		Pf1N1B4_2521	0.43	-1.1
2,860,316	-		Pf1N1B4_2521	0.44	-3.0
2,860,316	-		Pf1N1B4_2521	0.44	+1.8
2,860,316	-		Pf1N1B4_2521	0.44	-1.6
2,860,336	+		Pf1N1B4_2521	0.45	-1.7
2,860,336	+		Pf1N1B4_2521	0.45	-2.3
2,860,337	-		Pf1N1B4_2521	0.45	+0.8
2,860,337	-		Pf1N1B4_2521	0.45	+2.7
2,860,337	-		Pf1N1B4_2521	0.45	+0.3
2,860,397	-		Pf1N1B4_2521	0.49	-1.0
2,860,397	-		Pf1N1B4_2521	0.49	+0.8
2,860,475	-				+1.3
2,860,475	-		Pf1N1B4_2521	0.54	+0.7
2,860,528	+		Pf1N1B4_2521	0.57	+1.9
2,860,528	+		Pf1N1B4_2521	0.57	+0.7
2,860,528	+		Pf1N1B4_2521	0.57	-1.7
2,860,528	+		Pf1N1B4_2521	0.57	-2.2
2,860,528	+		Pf1N1B4_2521	0.57	-1.6
2,860,529	-		Pf1N1B4_2521	0.57	-0.6
2,860,529	-				+6.0
2,860,646	+		Pf1N1B4_2521	0.65	-2.5
2,860,646	+		Pf1N1B4_2521	0.65	-0.8
2,860,646	+		Pf1N1B4_2521	0.65	-0.2
2,860,646	+		Pf1N1B4_2521	0.65	-1.7
2,860,646	+		Pf1N1B4_2521	0.65	+0.3
2,860,647	-		Pf1N1B4_2521	0.65	-1.2
2,860,663	+		Pf1N1B4_2521	0.66	-0.9
2,860,663	+		Pf1N1B4_2521	0.66	-0.9
2,860,664	-		Pf1N1B4_2521	0.66	-1.2
2,860,702	-		Pf1N1B4_2521	0.68	-2.3
2,860,741	+		Pf1N1B4_2521	0.71	-1.2
2,860,741	+		Pf1N1B4_2521	0.71	-0.9
2,860,741	+		Pf1N1B4_2521	0.71	-3.2
2,860,741	+		Pf1N1B4_2521	0.71	-2.3
2,860,741	+		Pf1N1B4_2521	0.71	+1.1
2,860,742	-		Pf1N1B4_2521	0.71	-0.6
2,860,742	-		Pf1N1B4_2521	0.71	-0.5
2,860,742	-		Pf1N1B4_2521	0.71	+0.0
2,860,742	-		Pf1N1B4_2521	0.71	-0.2
2,860,742	-		Pf1N1B4_2521	0.71	+1.4
2,860,742	-		Pf1N1B4_2521	0.71	-0.6
2,860,742	-		Pf1N1B4_2521	0.71	-1.2
2,860,742	-		Pf1N1B4_2521	0.71	-0.3
2,860,742	-		Pf1N1B4_2521	0.71	-1.9
2,860,742	-		Pf1N1B4_2521	0.71	-2.5
2,860,742	-		Pf1N1B4_2521	0.71	-1.2
2,860,804	+		Pf1N1B4_2521	0.75	-0.3
2,860,804	+		Pf1N1B4_2521	0.75	-1.0
2,860,804	+				+1.3
2,860,804	+		Pf1N1B4_2521	0.75	-0.2
2,860,804	+		Pf1N1B4_2521	0.75	-1.7
2,860,804	+		Pf1N1B4_2521	0.75	+0.1
2,860,804	+		Pf1N1B4_2521	0.75	-1.1
2,860,804	+		Pf1N1B4_2521	0.75	-0.9
2,860,804	+		Pf1N1B4_2521	0.75	-2.3
2,860,804	+		Pf1N1B4_2521	0.75	+0.5
2,860,805	-		Pf1N1B4_2521	0.75	-0.7
2,860,805	-				+0.8
2,860,805	-		Pf1N1B4_2521	0.75	-1.5
2,860,805	-		Pf1N1B4_2521	0.75	+0.2
2,860,805	-		Pf1N1B4_2521	0.75	-0.9
2,860,834	+		Pf1N1B4_2521	0.77	-1.0
2,860,892	-				-0.5
2,860,927	+		Pf1N1B4_2521	0.83	-0.2
2,860,987	+		Pf1N1B4_2521	0.86	-1.3
2,861,002	+				-0.3
2,861,029	+		Pf1N1B4_2521	0.89	+0.3
2,861,029	+		Pf1N1B4_2521	0.89	-0.6
2,861,029	+		Pf1N1B4_2521	0.89	-2.8
2,861,029	+		Pf1N1B4_2521	0.89	-1.6
2,861,029	+		Pf1N1B4_2521	0.89	-1.6
2,861,029	+		Pf1N1B4_2521	0.89	-1.3
2,861,029	+		Pf1N1B4_2521	0.89	-3.3
2,861,030	-		Pf1N1B4_2521	0.89	-1.3
2,861,030	-		Pf1N1B4_2521	0.89	-2.7
2,861,077	+				+0.9
2,861,077	+				-0.0
2,861,077	+				-1.2
2,861,078	-				-0.6
2,861,081	+				-2.2
2,861,081	+				-1.4
2,861,081	+				-1.4
2,861,082	-				+0.1
2,861,238	+				+1.1
2,861,238	+				-1.6
2,861,238	+				-0.4
2,861,239	-				-1.9
2,861,239	-				-0.6
2,861,241	-				+0.3
2,861,243	-				-2.8
2,861,307	+				+0.3
2,861,352	+		Pf1N1B4_2522	0.12	-2.5
2,861,352	+				+1.8
2,861,352	+		Pf1N1B4_2522	0.12	-0.2
2,861,352	+		Pf1N1B4_2522	0.12	-1.1
2,861,352	+		Pf1N1B4_2522	0.12	-3.0
2,861,352	+		Pf1N1B4_2522	0.12	+2.3
2,861,352	+		Pf1N1B4_2522	0.12	-2.5
2,861,352	+		Pf1N1B4_2522	0.12	+1.5
2,861,352	+		Pf1N1B4_2522	0.12	-1.3
2,861,352	+		Pf1N1B4_2522	0.12	-0.2
2,861,353	-		Pf1N1B4_2522	0.12	-1.6
2,861,353	-		Pf1N1B4_2522	0.12	-0.6
2,861,353	-		Pf1N1B4_2522	0.12	-1.6
2,861,353	-				-0.2
2,861,353	-		Pf1N1B4_2522	0.12	+3.1
2,861,353	-		Pf1N1B4_2522	0.12	-1.4
2,861,353	-				-0.3
2,861,353	-		Pf1N1B4_2522	0.12	-0.0
2,861,353	-		Pf1N1B4_2522	0.12	-3.3
2,861,353	-		Pf1N1B4_2522	0.12	-2.9
2,861,353	-		Pf1N1B4_2522	0.12	-0.2
2,861,358	+		Pf1N1B4_2522	0.13	-0.3
2,861,358	+		Pf1N1B4_2522	0.13	-2.1
2,861,359	-		Pf1N1B4_2522	0.13	-1.3
2,861,359	-		Pf1N1B4_2522	0.13	-0.7
2,861,359	-		Pf1N1B4_2522	0.13	-1.7
2,861,361	+		Pf1N1B4_2522	0.13	-1.3
2,861,362	-		Pf1N1B4_2522	0.13	-0.6
2,861,362	-		Pf1N1B4_2522	0.13	-1.3
2,861,362	-		Pf1N1B4_2522	0.13	-0.2
2,861,454	+		Pf1N1B4_2522	0.20	-4.0
2,861,454	+		Pf1N1B4_2522	0.20	-0.5
2,861,454	+		Pf1N1B4_2522	0.20	-1.9
2,861,454	+		Pf1N1B4_2522	0.20	-1.7
2,861,454	+		Pf1N1B4_2522	0.20	-2.6
2,861,454	+		Pf1N1B4_2522	0.20	-1.8
2,861,454	+		Pf1N1B4_2522	0.20	-1.7
2,861,454	+		Pf1N1B4_2522	0.20	-2.1
2,861,454	+		Pf1N1B4_2522	0.20	-2.5
2,861,455	-		Pf1N1B4_2522	0.20	-2.0
2,861,455	-		Pf1N1B4_2522	0.20	-1.6
2,861,455	-		Pf1N1B4_2522	0.20	+1.8
2,861,455	-		Pf1N1B4_2522	0.20	-0.3
2,861,455	-		Pf1N1B4_2522	0.20	-1.5
2,861,455	-		Pf1N1B4_2522	0.20	-2.3
2,861,455	-				-0.5
2,861,455	-		Pf1N1B4_2522	0.20	-1.4
2,861,455	-		Pf1N1B4_2522	0.20	-1.7
2,861,455	-		Pf1N1B4_2522	0.20	-0.9
2,861,458	+		Pf1N1B4_2522	0.21	-1.9
2,861,458	+		Pf1N1B4_2522	0.21	-2.0
2,861,458	+		Pf1N1B4_2522	0.21	-1.9
2,861,458	+		Pf1N1B4_2522	0.21	-0.9
2,861,458	+		Pf1N1B4_2522	0.21	-2.5
2,861,458	+				+0.5
2,861,459	-		Pf1N1B4_2522	0.21	-0.3
2,861,459	-		Pf1N1B4_2522	0.21	-1.5
2,861,459	-		Pf1N1B4_2522	0.21	-1.1
2,861,622	+		Pf1N1B4_2522	0.34	-1.3
2,861,623	-		Pf1N1B4_2522	0.34	-1.7
2,861,643	+		Pf1N1B4_2522	0.35	-1.3
2,861,643	+		Pf1N1B4_2522	0.35	-2.9
2,861,643	+		Pf1N1B4_2522	0.35	+2.0
2,861,643	+		Pf1N1B4_2522	0.35	-1.4
2,861,644	-		Pf1N1B4_2522	0.35	-1.3
2,861,644	-		Pf1N1B4_2522	0.35	-1.4
2,861,723	+		Pf1N1B4_2522	0.42	-0.6
2,861,723	+		Pf1N1B4_2522	0.42	-0.9
2,861,766	+		Pf1N1B4_2522	0.45	+0.0
2,861,767	-		Pf1N1B4_2522	0.45	+0.3
2,861,767	-				-0.5
2,861,879	-		Pf1N1B4_2522	0.54	+1.2
2,861,879	-		Pf1N1B4_2522	0.54	-1.3
2,862,059	+		Pf1N1B4_2522	0.68	-1.4
2,862,059	+		Pf1N1B4_2522	0.68	+3.4
2,862,067	+		Pf1N1B4_2522	0.69	-1.2
2,862,459	+				-1.5
2,862,459	+				+1.8
2,862,459	+				+0.0
2,862,459	+				-2.6
2,862,459	+				-0.3
2,862,459	+				-1.1
2,862,459	+				-1.1
2,862,459	+				+2.8
2,862,459	+				-1.6
2,862,459	+				-0.9
2,862,459	+				-1.9
2,862,459	+				+2.4
2,862,459	+				+0.0
2,862,459	+				+0.2
2,862,459	+				-0.3
2,862,459	+				-0.7
2,862,459	+				-0.3
2,862,459	+				-0.5
2,862,459	+				-0.9
2,862,459	+				-1.7
2,862,459	+				-1.1
2,862,459	+				+2.8
2,862,459	+				-1.4
2,862,460	-				-1.4
2,862,460	-				+0.1
2,862,460	-				-0.4
2,862,460	-				+1.0
2,862,460	-				-1.7
2,862,460	-				-1.1
2,862,460	-				+0.4
2,862,460	-				-1.3
2,862,460	-				+0.3
2,862,477	+				-1.1
2,862,478	-				+1.2
2,862,478	-				+0.4
2,862,478	-				-0.9
2,862,478	-				-2.0
2,862,515	+				-2.3
2,862,515	+				+0.0
2,862,516	-				-0.4
2,862,536	+				+0.7
2,862,536	+				+1.5
2,862,536	+				-0.6
2,862,536	+				+0.7
2,862,536	+				-1.8
2,862,537	-				-1.7
2,862,537	-				-1.6
2,862,537	-				-0.5
2,862,537	-				+0.2
2,862,611	-				-0.7
2,862,624	+				-1.2
2,862,671	-				+4.0
2,862,671	-				-2.3
2,862,694	+				+0.0
2,862,694	+				-0.3
2,862,695	-				+0.8
2,862,714	+				-1.2
2,862,715	-				-1.4
2,862,715	-				-0.3
2,862,715	-				-1.2
2,862,730	+				-2.1
2,862,874	+		Pf1N1B4_2523	0.11	-2.0
2,862,874	+		Pf1N1B4_2523	0.11	+0.5
2,863,048	+		Pf1N1B4_2523	0.20	-3.9
2,863,049	-		Pf1N1B4_2523	0.20	-0.3
2,863,049	-		Pf1N1B4_2523	0.20	+1.4
2,863,078	+		Pf1N1B4_2523	0.21	+0.3
2,863,078	+		Pf1N1B4_2523	0.21	-1.1
2,863,088	-		Pf1N1B4_2523	0.22	-2.2
2,863,120	+				-1.2
2,863,120	+		Pf1N1B4_2523	0.23	-1.2
2,863,120	+		Pf1N1B4_2523	0.23	-1.0
2,863,120	+		Pf1N1B4_2523	0.23	-0.8
2,863,121	-		Pf1N1B4_2523	0.24	+1.5
2,863,121	-		Pf1N1B4_2523	0.24	-1.2
2,863,133	-		Pf1N1B4_2523	0.24	-1.2
2,863,133	-		Pf1N1B4_2523	0.24	+0.3
2,863,168	+		Pf1N1B4_2523	0.26	-1.2
2,863,168	+		Pf1N1B4_2523	0.26	+1.1
2,863,169	-		Pf1N1B4_2523	0.26	-2.1
2,863,183	+		Pf1N1B4_2523	0.27	-0.6
2,863,183	+		Pf1N1B4_2523	0.27	-1.6
2,863,184	-		Pf1N1B4_2523	0.27	+0.0
2,863,184	-		Pf1N1B4_2523	0.27	-1.5
2,863,184	-		Pf1N1B4_2523	0.27	-1.2
2,863,257	+		Pf1N1B4_2523	0.31	+0.0
2,863,257	+		Pf1N1B4_2523	0.31	+0.7
2,863,257	+		Pf1N1B4_2523	0.31	+1.3
2,863,257	+		Pf1N1B4_2523	0.31	-2.1
2,863,258	-		Pf1N1B4_2523	0.31	-2.0
2,863,258	-		Pf1N1B4_2523	0.31	+1.7
2,863,258	-		Pf1N1B4_2523	0.31	-3.1
2,863,258	-		Pf1N1B4_2523	0.31	-2.6
2,863,261	+		Pf1N1B4_2523	0.31	+0.1
2,863,261	+		Pf1N1B4_2523	0.31	-0.5
2,863,261	+		Pf1N1B4_2523	0.31	+0.5
2,863,261	+		Pf1N1B4_2523	0.31	-1.2
2,863,261	+		Pf1N1B4_2523	0.31	-2.4
2,863,261	+		Pf1N1B4_2523	0.31	-1.7
2,863,261	+		Pf1N1B4_2523	0.31	-0.6
2,863,262	-		Pf1N1B4_2523	0.31	-0.1
2,863,262	-		Pf1N1B4_2523	0.31	+1.6
2,863,262	-		Pf1N1B4_2523	0.31	-1.9
2,863,272	+		Pf1N1B4_2523	0.31	-1.8
2,863,273	-		Pf1N1B4_2523	0.31	-2.0
2,863,441	+		Pf1N1B4_2523	0.40	-0.5
2,863,441	+		Pf1N1B4_2523	0.40	-1.5
2,863,441	+		Pf1N1B4_2523	0.40	-2.2
2,863,441	+		Pf1N1B4_2523	0.40	-1.0
2,863,442	-		Pf1N1B4_2523	0.40	-2.5
2,863,442	-		Pf1N1B4_2523	0.40	-1.6
2,863,442	-		Pf1N1B4_2523	0.40	-2.9
2,863,442	-		Pf1N1B4_2523	0.40	-2.1
2,863,442	-		Pf1N1B4_2523	0.40	-1.2
2,863,443	+		Pf1N1B4_2523	0.40	-1.0
2,863,443	+		Pf1N1B4_2523	0.40	-4.1
2,863,443	+		Pf1N1B4_2523	0.40	-1.7
2,863,443	+		Pf1N1B4_2523	0.40	-1.2
2,863,443	+		Pf1N1B4_2523	0.40	-1.7
2,863,443	+		Pf1N1B4_2523	0.40	-0.6
2,863,443	+		Pf1N1B4_2523	0.40	-2.6
2,863,443	+		Pf1N1B4_2523	0.40	+0.1
2,863,443	+		Pf1N1B4_2523	0.40	-0.7
2,863,444	-		Pf1N1B4_2523	0.40	-0.6
2,863,444	-		Pf1N1B4_2523	0.40	-1.7
2,863,444	-		Pf1N1B4_2523	0.40	+0.2
2,863,444	-		Pf1N1B4_2523	0.40	-0.3
2,863,444	-		Pf1N1B4_2523	0.40	-1.9
2,863,444	-		Pf1N1B4_2523	0.40	+0.5
2,863,444	-		Pf1N1B4_2523	0.40	-1.5
2,863,444	-				-1.3
2,863,459	+		Pf1N1B4_2523	0.41	-1.2
2,863,459	+		Pf1N1B4_2523	0.41	-3.1
2,863,459	+				+0.4
2,863,459	+		Pf1N1B4_2523	0.41	+1.3
2,863,460	-		Pf1N1B4_2523	0.41	-0.3
2,863,460	-		Pf1N1B4_2523	0.41	-0.2
2,863,460	-		Pf1N1B4_2523	0.41	-0.6