Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1952

Experiment: carbon source Sucrose 1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	carbon source Sucrose 1mM
2,231,637	+		Pf1N1B4_1951	0.24	-0.7
2,231,637	+		Pf1N1B4_1951	0.24	-0.3
2,231,637	+		Pf1N1B4_1951	0.24	-1.8
2,231,637	+		Pf1N1B4_1951	0.24	-0.7
2,231,637	+		Pf1N1B4_1951	0.24	+2.3
2,231,638	-		Pf1N1B4_1951	0.24	-1.7
2,231,638	-		Pf1N1B4_1951	0.24	-1.3
2,231,638	-		Pf1N1B4_1951	0.24	+2.6
2,231,638	-		Pf1N1B4_1951	0.24	-2.2
2,231,773	+		Pf1N1B4_1951	0.35	-1.9
2,231,773	+		Pf1N1B4_1951	0.35	+0.8
2,231,773	+		Pf1N1B4_1951	0.35	+2.4
2,231,773	+		Pf1N1B4_1951	0.35	-0.7
2,231,774	-		Pf1N1B4_1951	0.35	-2.3
2,231,774	-				-0.1
2,231,774	-		Pf1N1B4_1951	0.35	-0.9
2,231,774	-		Pf1N1B4_1951	0.35	-1.4
2,231,784	+		Pf1N1B4_1951	0.36	-2.1
2,231,784	+		Pf1N1B4_1951	0.36	-0.3
2,231,785	-		Pf1N1B4_1951	0.36	-2.7
2,231,785	-		Pf1N1B4_1951	0.36	+0.7
2,231,785	-		Pf1N1B4_1951	0.36	-0.1
2,231,854	+		Pf1N1B4_1951	0.41	+3.4
2,231,854	+		Pf1N1B4_1951	0.41	+1.4
2,231,854	+		Pf1N1B4_1951	0.41	-0.2
2,231,854	+				-1.0
2,231,855	-		Pf1N1B4_1951	0.41	+2.0
2,231,855	-		Pf1N1B4_1951	0.41	+1.0
2,231,855	-		Pf1N1B4_1951	0.41	-2.1
2,231,855	-				+0.1
2,231,855	-		Pf1N1B4_1951	0.41	-0.1
2,231,855	-		Pf1N1B4_1951	0.41	-0.3
2,232,009	-		Pf1N1B4_1951	0.53	-0.7
2,232,079	-		Pf1N1B4_1951	0.59	-1.2
2,232,100	+		Pf1N1B4_1951	0.60	-0.3
2,232,100	+		Pf1N1B4_1951	0.60	+1.1
2,232,100	+		Pf1N1B4_1951	0.60	+3.9
2,232,100	+		Pf1N1B4_1951	0.60	-1.5
2,232,100	+		Pf1N1B4_1951	0.60	-0.6
2,232,100	+		Pf1N1B4_1951	0.60	-1.7
2,232,101	-		Pf1N1B4_1951	0.61	+2.1
2,232,101	-		Pf1N1B4_1951	0.61	-1.3
2,232,101	-		Pf1N1B4_1951	0.61	+1.5
2,232,101	-		Pf1N1B4_1951	0.61	-0.6
2,232,101	-		Pf1N1B4_1951	0.61	+0.6
2,232,101	-		Pf1N1B4_1951	0.61	-1.7
2,232,181	+		Pf1N1B4_1951	0.67	-3.2
2,232,181	+		Pf1N1B4_1951	0.67	+0.4
2,232,181	+		Pf1N1B4_1951	0.67	+3.9
2,232,181	+		Pf1N1B4_1951	0.67	-2.4
2,232,181	+		Pf1N1B4_1951	0.67	+1.9
2,232,182	-		Pf1N1B4_1951	0.67	-0.4
2,232,182	-		Pf1N1B4_1951	0.67	+0.7
2,232,182	-		Pf1N1B4_1951	0.67	+2.2
2,232,182	-		Pf1N1B4_1951	0.67	-0.1
2,232,182	-		Pf1N1B4_1951	0.67	-1.0
2,232,182	-		Pf1N1B4_1951	0.67	+0.9
2,232,182	-		Pf1N1B4_1951	0.67	+1.8
2,232,182	-		Pf1N1B4_1951	0.67	-1.4
2,232,341	+		Pf1N1B4_1951	0.79	-2.1
2,232,342	-		Pf1N1B4_1951	0.79	-1.7
2,232,342	-		Pf1N1B4_1951	0.79	-0.8
2,232,425	-		Pf1N1B4_1951	0.86	+0.7
2,232,435	+		Pf1N1B4_1951	0.87	+2.3
2,232,436	-		Pf1N1B4_1951	0.87	+0.3
2,232,445	+		Pf1N1B4_1951	0.87	+2.1
2,232,835	-		Pf1N1B4_1952	0.12	+0.6
2,232,835	-		Pf1N1B4_1952	0.12	+2.3
2,232,918	+		Pf1N1B4_1952	0.16	+1.6
2,232,918	+		Pf1N1B4_1952	0.16	+1.1
2,232,918	+		Pf1N1B4_1952	0.16	+2.4
2,232,919	-		Pf1N1B4_1952	0.16	+2.2
2,232,919	-		Pf1N1B4_1952	0.16	+1.1
2,232,919	-		Pf1N1B4_1952	0.16	+1.1
2,232,919	-		Pf1N1B4_1952	0.16	+0.2
2,232,919	-		Pf1N1B4_1952	0.16	+0.7
2,232,919	-		Pf1N1B4_1952	0.16	-0.4
2,232,919	-		Pf1N1B4_1952	0.16	+0.6
2,232,919	-		Pf1N1B4_1952	0.16	+0.4
2,233,052	+		Pf1N1B4_1952	0.24	+2.4
2,233,052	+		Pf1N1B4_1952	0.24	-1.1
2,233,052	+		Pf1N1B4_1952	0.24	+1.4
2,233,052	+		Pf1N1B4_1952	0.24	+2.1
2,233,052	+		Pf1N1B4_1952	0.24	-1.9
2,233,053	-		Pf1N1B4_1952	0.24	-1.3
2,233,053	-		Pf1N1B4_1952	0.24	+1.1
2,233,053	-		Pf1N1B4_1952	0.24	-0.5
2,233,053	-		Pf1N1B4_1952	0.24	+1.4
2,233,053	-		Pf1N1B4_1952	0.24	-1.4
2,233,053	-		Pf1N1B4_1952	0.24	+1.7
2,233,068	+		Pf1N1B4_1952	0.25	+3.6
2,233,069	-		Pf1N1B4_1952	0.25	-0.0
2,233,069	-		Pf1N1B4_1952	0.25	-1.4
2,233,069	-		Pf1N1B4_1952	0.25	+0.0
2,233,069	-		Pf1N1B4_1952	0.25	-0.3
2,233,083	-		Pf1N1B4_1952	0.26	-1.7
2,233,128	+		Pf1N1B4_1952	0.28	-2.8
2,233,128	+		Pf1N1B4_1952	0.28	+1.4
2,233,128	+		Pf1N1B4_1952	0.28	-3.7
2,233,129	-		Pf1N1B4_1952	0.28	+1.7
2,233,129	-		Pf1N1B4_1952	0.28	-0.8
2,233,266	+		Pf1N1B4_1952	0.36	-2.2
2,233,266	+		Pf1N1B4_1952	0.36	+0.5
2,233,326	+		Pf1N1B4_1952	0.39	-0.1
2,233,326	+		Pf1N1B4_1952	0.39	-0.0
2,233,326	+		Pf1N1B4_1952	0.39	-1.5
2,233,326	+		Pf1N1B4_1952	0.39	-0.3
2,233,326	+		Pf1N1B4_1952	0.39	-0.2
2,233,326	+		Pf1N1B4_1952	0.39	-1.1
2,233,326	+		Pf1N1B4_1952	0.39	+2.4
2,233,327	-		Pf1N1B4_1952	0.40	-0.4
2,233,327	-		Pf1N1B4_1952	0.40	+0.9
2,233,327	-		Pf1N1B4_1952	0.40	+2.0
2,233,327	-		Pf1N1B4_1952	0.40	-2.1
2,233,327	-		Pf1N1B4_1952	0.40	+0.0
2,233,327	-		Pf1N1B4_1952	0.40	+1.3
2,233,327	-		Pf1N1B4_1952	0.40	-0.4
2,233,327	-		Pf1N1B4_1952	0.40	-2.7
2,233,327	-		Pf1N1B4_1952	0.40	-1.7
2,233,428	+		Pf1N1B4_1952	0.45	+0.4
2,233,428	+		Pf1N1B4_1952	0.45	-2.5
2,233,429	-		Pf1N1B4_1952	0.45	-1.0
2,233,429	-		Pf1N1B4_1952	0.45	-1.2
2,233,429	-		Pf1N1B4_1952	0.45	-1.6
2,233,555	+		Pf1N1B4_1952	0.53	+0.1
2,233,556	-		Pf1N1B4_1952	0.53	-2.3
2,233,776	+		Pf1N1B4_1952	0.65	+1.1
2,233,776	+		Pf1N1B4_1952	0.65	-1.6
2,233,776	+		Pf1N1B4_1952	0.65	+0.7
2,233,776	+				-0.6
2,233,776	+		Pf1N1B4_1952	0.65	+1.1
2,233,776	+		Pf1N1B4_1952	0.65	-0.2
2,233,776	+		Pf1N1B4_1952	0.65	-1.0
2,233,776	+		Pf1N1B4_1952	0.65	+0.7
2,233,777	-		Pf1N1B4_1952	0.65	-1.9
2,233,777	-		Pf1N1B4_1952	0.65	-0.1
2,233,777	-		Pf1N1B4_1952	0.65	+0.1
2,233,777	-		Pf1N1B4_1952	0.65	-1.7
2,233,777	-		Pf1N1B4_1952	0.65	+0.0
2,233,834	-		Pf1N1B4_1952	0.68	-2.0
2,233,834	-		Pf1N1B4_1952	0.68	-1.7
2,233,877	+				+0.1
2,233,877	+		Pf1N1B4_1952	0.71	+0.1
2,233,877	+		Pf1N1B4_1952	0.71	-0.1
2,233,877	+		Pf1N1B4_1952	0.71	+0.4
2,233,877	+		Pf1N1B4_1952	0.71	-4.1
2,233,877	+		Pf1N1B4_1952	0.71	-2.1
2,233,877	+		Pf1N1B4_1952	0.71	+0.7
2,233,878	-		Pf1N1B4_1952	0.71	+0.5
2,233,878	-		Pf1N1B4_1952	0.71	+0.1
2,233,878	-		Pf1N1B4_1952	0.71	-0.3
2,233,878	-		Pf1N1B4_1952	0.71	-1.1
2,233,878	-		Pf1N1B4_1952	0.71	+0.7
2,233,878	-		Pf1N1B4_1952	0.71	+0.7
2,233,881	+		Pf1N1B4_1952	0.71	+0.4
2,233,881	+		Pf1N1B4_1952	0.71	+3.4
2,233,881	+		Pf1N1B4_1952	0.71	+1.1
2,233,881	+		Pf1N1B4_1952	0.71	+0.0
2,233,881	+		Pf1N1B4_1952	0.71	+0.1
2,233,881	+		Pf1N1B4_1952	0.71	+0.8
2,233,950	+		Pf1N1B4_1952	0.75	-0.1
2,233,950	+		Pf1N1B4_1952	0.75	+1.0
2,233,950	+		Pf1N1B4_1952	0.75	-0.7
2,233,951	-		Pf1N1B4_1952	0.75	-0.6
2,233,951	-		Pf1N1B4_1952	0.75	-0.4
2,233,951	-		Pf1N1B4_1952	0.75	+0.8
2,234,007	+		Pf1N1B4_1952	0.78	-1.9
2,234,007	+		Pf1N1B4_1952	0.78	+0.3
2,234,007	+		Pf1N1B4_1952	0.78	+2.0
2,234,007	+		Pf1N1B4_1952	0.78	-0.2
2,234,008	-		Pf1N1B4_1952	0.78	-2.3
2,234,008	-		Pf1N1B4_1952	0.78	-0.1
2,234,334	+				-0.7
2,234,371	+				+2.0
2,234,372	-				-1.3
2,234,372	-				-1.5
2,234,401	+				+1.5
2,234,417	+				+2.2
2,234,417	+				-0.4
2,234,418	-				-0.6
2,234,418	-				+1.0
2,234,418	-				+0.6
2,234,431	+				-1.4
2,234,431	+				-0.9
2,234,432	-				-1.9
2,234,432	-				+0.9
2,234,494	+		Pf1N1B4_1953	0.10	+1.0
2,234,495	-		Pf1N1B4_1953	0.10	+1.5
2,234,495	-		Pf1N1B4_1953	0.10	+0.1
2,234,495	-		Pf1N1B4_1953	0.10	+1.0
2,234,495	-		Pf1N1B4_1953	0.10	-1.2
2,234,495	-		Pf1N1B4_1953	0.10	+1.4
2,234,586	+		Pf1N1B4_1953	0.25	+1.3
2,234,587	-		Pf1N1B4_1953	0.25	-1.8
2,234,623	+		Pf1N1B4_1953	0.31	-2.9
2,234,623	+		Pf1N1B4_1953	0.31	-1.2
2,234,624	-		Pf1N1B4_1953	0.31	+1.2
2,234,665	+		Pf1N1B4_1953	0.38	-1.1
2,234,666	-		Pf1N1B4_1953	0.38	+0.1
2,234,666	-		Pf1N1B4_1953	0.38	+1.2
2,234,780	+		Pf1N1B4_1953	0.56	+0.1
2,234,785	+		Pf1N1B4_1953	0.57	-1.0
2,234,878	-		Pf1N1B4_1953	0.72	+0.7
2,234,886	+		Pf1N1B4_1953	0.73	-1.2
2,234,886	+		Pf1N1B4_1953	0.73	+1.8
2,235,032	+				+0.9
2,235,032	+				+0.1
2,235,032	+				+0.1
2,235,032	+				+1.4
2,235,032	+				+0.9
2,235,032	+				+2.7
2,235,033	-				-0.4
2,235,033	-				-1.5
2,235,033	-				-0.9
2,235,033	-				+4.5
2,235,033	-				+0.4
2,235,040	+				-2.0
2,235,040	+				-0.4
2,235,040	+				-1.4
2,235,040	+				-0.3
2,235,040	+				+0.7
2,235,041	-				-1.3
2,235,041	-				+2.0
2,235,041	-				-1.4
2,235,041	-				-0.2
2,235,041	-				-1.2
2,235,041	-				+1.9
2,235,041	-				+0.4
2,235,096	+				+2.4
2,235,097	-				-0.6
2,235,098	+				+0.1
2,235,098	+				+0.7
2,235,098	+				+2.7
2,235,098	+				-1.9
2,235,098	+				+0.6
2,235,098	+				-0.3
2,235,098	+				-0.7
2,235,098	+				-1.0
2,235,098	+				-1.6
2,235,098	+				-1.0
2,235,098	+				+0.8
2,235,098	+				+0.7
2,235,098	+				-0.3
2,235,098	+				+1.1
2,235,098	+				+1.6
2,235,098	+				+1.0
2,235,099	-				+0.9
2,235,099	-				-0.9
2,235,099	-				-1.7
2,235,099	-				+0.6
2,235,099	-				+1.0
2,235,099	-				-1.5
2,235,099	-				-2.4
2,235,099	-				-0.9
2,235,099	-				-1.1
2,235,099	-				-1.7
2,235,099	-				+1.3
2,235,099	-				+1.1
2,235,099	-				+1.7
2,235,099	-				+0.4
2,235,099	-				-1.8
2,235,099	-				-1.5
2,235,099	-				-0.4
2,235,099	-				-1.4
2,235,099	-				-1.2
2,235,099	-				-0.6
2,235,099	-				-1.5
2,235,099	-				+1.6
2,235,108	+				-0.6
2,235,108	+				-0.4
2,235,123	+				-2.2
2,235,124	-				-0.0
2,235,207	+				+0.4
2,235,208	-				+1.8
2,235,208	-				-1.3
2,235,365	+		Pf1N1B4_1954	0.17	-0.2
2,235,365	+		Pf1N1B4_1954	0.17	-1.8
2,235,365	+		Pf1N1B4_1954	0.17	-1.9
2,235,365	+		Pf1N1B4_1954	0.17	+1.2
2,235,365	+		Pf1N1B4_1954	0.17	-2.3
2,235,365	+		Pf1N1B4_1954	0.17	-1.0
2,235,365	+		Pf1N1B4_1954	0.17	+1.6
2,235,366	-		Pf1N1B4_1954	0.17	+0.1
2,235,366	-		Pf1N1B4_1954	0.17	+0.4
2,235,366	-		Pf1N1B4_1954	0.17	-0.7
2,235,366	-		Pf1N1B4_1954	0.17	-2.4
2,235,366	-		Pf1N1B4_1954	0.17	-1.6
2,235,366	-		Pf1N1B4_1954	0.17	-1.7
2,235,366	-		Pf1N1B4_1954	0.17	+1.7