Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2521

Experiment: carbon source Sucrose 1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	carbon source Sucrose 1mM
2,858,759	-		Pf1N1B4_2520	0.34	-2.6
2,859,561	-				-0.2
2,859,571	-				+3.1
2,859,571	-				-1.8
2,859,597	+				+2.0
2,859,597	+				-1.4
2,859,670	+				+0.0
2,859,671	-				-3.1
2,859,671	-				-0.2
2,859,874	+		Pf1N1B4_2521	0.15	-0.8
2,859,874	+		Pf1N1B4_2521	0.15	-0.6
2,859,874	+		Pf1N1B4_2521	0.15	-1.0
2,859,874	+		Pf1N1B4_2521	0.15	+0.0
2,859,874	+		Pf1N1B4_2521	0.15	-2.0
2,859,874	+		Pf1N1B4_2521	0.15	-4.6
2,859,874	+		Pf1N1B4_2521	0.15	-1.4
2,859,874	+		Pf1N1B4_2521	0.15	-2.1
2,859,874	+		Pf1N1B4_2521	0.15	-0.7
2,859,874	+		Pf1N1B4_2521	0.15	-2.8
2,859,874	+		Pf1N1B4_2521	0.15	-1.5
2,859,875	-		Pf1N1B4_2521	0.15	-2.4
2,859,875	-		Pf1N1B4_2521	0.15	-0.8
2,859,875	-				-0.3
2,859,875	-		Pf1N1B4_2521	0.15	-1.1
2,859,882	+		Pf1N1B4_2521	0.16	-2.7
2,859,882	+		Pf1N1B4_2521	0.16	+0.8
2,859,882	+		Pf1N1B4_2521	0.16	-2.4
2,859,882	+		Pf1N1B4_2521	0.16	-1.4
2,859,883	-		Pf1N1B4_2521	0.16	-0.8
2,859,883	-		Pf1N1B4_2521	0.16	-0.6
2,859,883	-		Pf1N1B4_2521	0.16	+0.6
2,859,883	-		Pf1N1B4_2521	0.16	-1.6
2,859,883	-		Pf1N1B4_2521	0.16	-2.7
2,859,883	-		Pf1N1B4_2521	0.16	-1.3
2,859,883	-		Pf1N1B4_2521	0.16	-1.1
2,859,883	-		Pf1N1B4_2521	0.16	-2.3
2,859,883	-		Pf1N1B4_2521	0.16	+0.0
2,859,883	-		Pf1N1B4_2521	0.16	-1.0
2,859,883	-		Pf1N1B4_2521	0.16	-0.4
2,859,883	-		Pf1N1B4_2521	0.16	-2.9
2,859,910	+		Pf1N1B4_2521	0.18	-1.6
2,859,910	+		Pf1N1B4_2521	0.18	-1.6
2,859,910	+		Pf1N1B4_2521	0.18	-1.4
2,859,911	-		Pf1N1B4_2521	0.18	+0.3
2,859,911	-		Pf1N1B4_2521	0.18	-2.3
2,859,911	-		Pf1N1B4_2521	0.18	-1.1
2,859,911	-		Pf1N1B4_2521	0.18	-1.4
2,859,911	-		Pf1N1B4_2521	0.18	-0.3
2,859,911	-		Pf1N1B4_2521	0.18	-2.4
2,859,911	-		Pf1N1B4_2521	0.18	+0.3
2,859,911	-		Pf1N1B4_2521	0.18	-3.6
2,859,911	-		Pf1N1B4_2521	0.18	-1.6
2,859,911	-		Pf1N1B4_2521	0.18	-1.9
2,860,046	-		Pf1N1B4_2521	0.26	-0.9
2,860,046	-		Pf1N1B4_2521	0.26	-2.1
2,860,046	-		Pf1N1B4_2521	0.26	-2.1
2,860,139	-		Pf1N1B4_2521	0.32	-0.7
2,860,183	+		Pf1N1B4_2521	0.35	-0.7
2,860,183	+		Pf1N1B4_2521	0.35	+0.7
2,860,183	+		Pf1N1B4_2521	0.35	+1.7
2,860,183	+		Pf1N1B4_2521	0.35	-2.1
2,860,184	-		Pf1N1B4_2521	0.35	-0.9
2,860,204	+		Pf1N1B4_2521	0.36	-2.4
2,860,205	-		Pf1N1B4_2521	0.36	-4.9
2,860,222	+		Pf1N1B4_2521	0.37	-1.4
2,860,222	+		Pf1N1B4_2521	0.37	-1.0
2,860,222	+		Pf1N1B4_2521	0.37	+0.6
2,860,222	+		Pf1N1B4_2521	0.37	-2.3
2,860,222	+		Pf1N1B4_2521	0.37	-1.6
2,860,222	+		Pf1N1B4_2521	0.37	-2.2
2,860,222	+		Pf1N1B4_2521	0.37	+1.1
2,860,222	+		Pf1N1B4_2521	0.37	+0.7
2,860,222	+		Pf1N1B4_2521	0.37	-1.4
2,860,222	+		Pf1N1B4_2521	0.37	-0.9
2,860,223	-		Pf1N1B4_2521	0.38	+0.0
2,860,223	-		Pf1N1B4_2521	0.38	-2.4
2,860,223	-		Pf1N1B4_2521	0.38	-0.3
2,860,225	+				+2.8
2,860,315	+		Pf1N1B4_2521	0.43	-1.5
2,860,315	+		Pf1N1B4_2521	0.43	-1.3
2,860,316	-		Pf1N1B4_2521	0.44	-3.2
2,860,316	-		Pf1N1B4_2521	0.44	-0.7
2,860,316	-		Pf1N1B4_2521	0.44	-1.8
2,860,336	+		Pf1N1B4_2521	0.45	-1.9
2,860,336	+		Pf1N1B4_2521	0.45	-2.6
2,860,337	-		Pf1N1B4_2521	0.45	-1.0
2,860,337	-		Pf1N1B4_2521	0.45	+2.3
2,860,337	-		Pf1N1B4_2521	0.45	-1.5
2,860,397	-		Pf1N1B4_2521	0.49	-1.2
2,860,397	-		Pf1N1B4_2521	0.49	+0.6
2,860,475	-				+1.0
2,860,475	-		Pf1N1B4_2521	0.54	-1.1
2,860,528	+		Pf1N1B4_2521	0.57	+1.2
2,860,528	+		Pf1N1B4_2521	0.57	-2.1
2,860,528	+		Pf1N1B4_2521	0.57	-2.0
2,860,528	+		Pf1N1B4_2521	0.57	-2.4
2,860,528	+		Pf1N1B4_2521	0.57	+2.1
2,860,529	-		Pf1N1B4_2521	0.57	-0.8
2,860,529	-				+2.6
2,860,646	+		Pf1N1B4_2521	0.65	-2.3
2,860,646	+		Pf1N1B4_2521	0.65	-0.4
2,860,646	+		Pf1N1B4_2521	0.65	-0.4
2,860,646	+		Pf1N1B4_2521	0.65	-1.0
2,860,646	+		Pf1N1B4_2521	0.65	+0.0
2,860,647	-		Pf1N1B4_2521	0.65	-0.4
2,860,663	+		Pf1N1B4_2521	0.66	-2.6
2,860,663	+		Pf1N1B4_2521	0.66	+1.7
2,860,664	-		Pf1N1B4_2521	0.66	-1.4
2,860,702	-		Pf1N1B4_2521	0.68	-0.9
2,860,741	+		Pf1N1B4_2521	0.71	-1.4
2,860,741	+		Pf1N1B4_2521	0.71	-2.1
2,860,741	+		Pf1N1B4_2521	0.71	-1.8
2,860,741	+		Pf1N1B4_2521	0.71	-2.5
2,860,741	+		Pf1N1B4_2521	0.71	-2.3
2,860,742	-		Pf1N1B4_2521	0.71	-0.8
2,860,742	-		Pf1N1B4_2521	0.71	-2.3
2,860,742	-		Pf1N1B4_2521	0.71	-0.2
2,860,742	-		Pf1N1B4_2521	0.71	+0.2
2,860,742	-		Pf1N1B4_2521	0.71	-2.0
2,860,742	-		Pf1N1B4_2521	0.71	-0.8
2,860,742	-		Pf1N1B4_2521	0.71	-1.4
2,860,742	-		Pf1N1B4_2521	0.71	-2.6
2,860,742	-		Pf1N1B4_2521	0.71	-2.1
2,860,742	-		Pf1N1B4_2521	0.71	-1.7
2,860,742	-		Pf1N1B4_2521	0.71	-2.4
2,860,804	+		Pf1N1B4_2521	0.75	-1.6
2,860,804	+		Pf1N1B4_2521	0.75	-1.2
2,860,804	+				+4.2
2,860,804	+		Pf1N1B4_2521	0.75	-1.4
2,860,804	+		Pf1N1B4_2521	0.75	-1.0
2,860,804	+		Pf1N1B4_2521	0.75	-2.1
2,860,804	+		Pf1N1B4_2521	0.75	-1.3
2,860,804	+		Pf1N1B4_2521	0.75	-1.7
2,860,804	+		Pf1N1B4_2521	0.75	-2.6
2,860,804	+		Pf1N1B4_2521	0.75	-0.7
2,860,805	-		Pf1N1B4_2521	0.75	+0.0
2,860,805	-				+0.6
2,860,805	-		Pf1N1B4_2521	0.75	-1.7
2,860,805	-		Pf1N1B4_2521	0.75	-1.6
2,860,805	-		Pf1N1B4_2521	0.75	-0.1
2,860,834	+		Pf1N1B4_2521	0.77	-1.2
2,860,892	-				-0.7
2,860,927	+		Pf1N1B4_2521	0.83	-0.4
2,860,987	+		Pf1N1B4_2521	0.86	-0.9
2,861,002	+				-0.6
2,861,029	+		Pf1N1B4_2521	0.89	-2.0
2,861,029	+		Pf1N1B4_2521	0.89	+0.2
2,861,029	+		Pf1N1B4_2521	0.89	-1.0
2,861,029	+		Pf1N1B4_2521	0.89	-1.8
2,861,029	+		Pf1N1B4_2521	0.89	-0.8
2,861,029	+		Pf1N1B4_2521	0.89	-0.6
2,861,029	+		Pf1N1B4_2521	0.89	-1.2
2,861,030	-		Pf1N1B4_2521	0.89	-0.6
2,861,030	-		Pf1N1B4_2521	0.89	-0.9
2,861,077	+				-0.6
2,861,077	+				-2.3
2,861,077	+				-1.4
2,861,078	-				-0.8
2,861,081	+				-1.6
2,861,081	+				-1.6
2,861,081	+				-0.6
2,861,082	-				-1.7
2,861,238	+				-2.7
2,861,238	+				-1.8
2,861,238	+				-2.2
2,861,239	-				-1.1
2,861,239	-				-2.4
2,861,241	-				+0.0
2,861,243	-				+1.3
2,861,307	+				+0.9
2,861,352	+		Pf1N1B4_2522	0.12	+1.1
2,861,352	+				+1.6
2,861,352	+		Pf1N1B4_2522	0.12	-0.4
2,861,352	+		Pf1N1B4_2522	0.12	-2.3
2,861,352	+		Pf1N1B4_2522	0.12	-1.3
2,861,352	+		Pf1N1B4_2522	0.12	+1.0
2,861,352	+		Pf1N1B4_2522	0.12	-1.7
2,861,352	+		Pf1N1B4_2522	0.12	-1.8
2,861,352	+		Pf1N1B4_2522	0.12	-1.6
2,861,352	+		Pf1N1B4_2522	0.12	-0.4
2,861,353	-		Pf1N1B4_2522	0.12	-0.2
2,861,353	-		Pf1N1B4_2522	0.12	-0.8
2,861,353	-		Pf1N1B4_2522	0.12	-1.8
2,861,353	-				-0.4
2,861,353	-		Pf1N1B4_2522	0.12	+0.0
2,861,353	-		Pf1N1B4_2522	0.12	-1.6
2,861,353	-				-0.6
2,861,353	-		Pf1N1B4_2522	0.12	-2.8
2,861,353	-		Pf1N1B4_2522	0.12	-3.5
2,861,353	-		Pf1N1B4_2522	0.12	-3.1
2,861,353	-		Pf1N1B4_2522	0.12	-1.0
2,861,358	+		Pf1N1B4_2522	0.13	-0.6
2,861,358	+		Pf1N1B4_2522	0.13	-3.4
2,861,359	-		Pf1N1B4_2522	0.13	+0.5
2,861,359	-		Pf1N1B4_2522	0.13	-1.0
2,861,359	-		Pf1N1B4_2522	0.13	-1.9
2,861,361	+		Pf1N1B4_2522	0.13	+2.1
2,861,362	-		Pf1N1B4_2522	0.13	-0.8
2,861,362	-		Pf1N1B4_2522	0.13	+0.0
2,861,362	-		Pf1N1B4_2522	0.13	-0.4
2,861,454	+		Pf1N1B4_2522	0.20	-4.2
2,861,454	+		Pf1N1B4_2522	0.20	-0.7
2,861,454	+		Pf1N1B4_2522	0.20	-2.1
2,861,454	+		Pf1N1B4_2522	0.20	+0.4
2,861,454	+		Pf1N1B4_2522	0.20	+0.7
2,861,454	+		Pf1N1B4_2522	0.20	+1.0
2,861,454	+		Pf1N1B4_2522	0.20	+0.1
2,861,454	+		Pf1N1B4_2522	0.20	-2.3
2,861,454	+		Pf1N1B4_2522	0.20	-1.7
2,861,455	-		Pf1N1B4_2522	0.20	-2.2
2,861,455	-		Pf1N1B4_2522	0.20	+0.2
2,861,455	-		Pf1N1B4_2522	0.20	-0.8
2,861,455	-		Pf1N1B4_2522	0.20	-0.6
2,861,455	-		Pf1N1B4_2522	0.20	-1.7
2,861,455	-		Pf1N1B4_2522	0.20	-0.9
2,861,455	-				-0.7
2,861,455	-		Pf1N1B4_2522	0.20	-1.6
2,861,455	-		Pf1N1B4_2522	0.20	+0.9
2,861,455	-		Pf1N1B4_2522	0.20	-1.1
2,861,458	+		Pf1N1B4_2522	0.21	-2.1
2,861,458	+		Pf1N1B4_2522	0.21	-0.2
2,861,458	+		Pf1N1B4_2522	0.21	+0.7
2,861,458	+		Pf1N1B4_2522	0.21	+0.9
2,861,458	+		Pf1N1B4_2522	0.21	+0.1
2,861,458	+				+1.3
2,861,459	-		Pf1N1B4_2522	0.21	+0.4
2,861,459	-		Pf1N1B4_2522	0.21	-1.7
2,861,459	-		Pf1N1B4_2522	0.21	+1.0
2,861,622	+		Pf1N1B4_2522	0.34	-0.5
2,861,623	-		Pf1N1B4_2522	0.34	-0.9
2,861,643	+		Pf1N1B4_2522	0.35	-1.6
2,861,643	+		Pf1N1B4_2522	0.35	-3.1
2,861,643	+		Pf1N1B4_2522	0.35	-0.6
2,861,643	+		Pf1N1B4_2522	0.35	-2.6
2,861,644	-		Pf1N1B4_2522	0.35	-0.6
2,861,644	-		Pf1N1B4_2522	0.35	-2.6
2,861,723	+		Pf1N1B4_2522	0.42	-0.8
2,861,723	+		Pf1N1B4_2522	0.42	-2.1
2,861,766	+		Pf1N1B4_2522	0.45	-0.2
2,861,767	-		Pf1N1B4_2522	0.45	+0.0
2,861,767	-				-0.7
2,861,879	-		Pf1N1B4_2522	0.54	-1.4
2,861,879	-		Pf1N1B4_2522	0.54	-1.5
2,862,059	+		Pf1N1B4_2522	0.68	-1.6
2,862,059	+		Pf1N1B4_2522	0.68	+0.0
2,862,067	+		Pf1N1B4_2522	0.69	-1.4