Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2498

Experiment: nitrogen source nitrite 0.1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrogen source nitrite 0.1mM
2,832,304	+		Pf1N1B4_2496	0.88	+0.2
2,832,305	-		Pf1N1B4_2496	0.88	-0.9
2,832,322	+		Pf1N1B4_2496	0.89	-2.4
2,832,322	+		Pf1N1B4_2496	0.89	+1.0
2,832,323	-		Pf1N1B4_2496	0.89	-1.8
2,832,331	+		Pf1N1B4_2496	0.89	+2.2
2,832,331	+		Pf1N1B4_2496	0.89	-2.8
2,832,332	-		Pf1N1B4_2496	0.89	+3.4
2,832,332	-		Pf1N1B4_2496	0.89	-1.8
2,832,332	-				+1.8
2,832,337	+		Pf1N1B4_2496	0.90	-2.0
2,832,337	+		Pf1N1B4_2496	0.90	+1.5
2,832,337	+		Pf1N1B4_2496	0.90	-1.1
2,832,337	+		Pf1N1B4_2496	0.90	-0.8
2,832,337	+		Pf1N1B4_2496	0.90	-1.5
2,832,337	+		Pf1N1B4_2496	0.90	-1.8
2,832,337	+		Pf1N1B4_2496	0.90	+0.8
2,832,337	+		Pf1N1B4_2496	0.90	+0.2
2,832,338	-		Pf1N1B4_2496	0.90	-0.8
2,832,338	-		Pf1N1B4_2496	0.90	+0.4
2,832,338	-		Pf1N1B4_2496	0.90	+0.2
2,832,338	-		Pf1N1B4_2496	0.90	+0.5
2,832,338	-		Pf1N1B4_2496	0.90	-2.2
2,832,338	-		Pf1N1B4_2496	0.90	+0.1
2,832,338	-		Pf1N1B4_2496	0.90	-1.4
2,832,338	-		Pf1N1B4_2496	0.90	-0.7
2,832,338	-		Pf1N1B4_2496	0.90	+0.6
2,832,338	-		Pf1N1B4_2496	0.90	-0.4
2,832,338	-		Pf1N1B4_2496	0.90	+3.0
2,832,338	-		Pf1N1B4_2496	0.90	+1.5
2,832,338	-		Pf1N1B4_2496	0.90	-2.6
2,832,338	-		Pf1N1B4_2496	0.90	-1.3
2,832,338	-		Pf1N1B4_2496	0.90	+1.5
2,832,424	+				-2.6
2,832,424	+				-1.3
2,832,425	-				-1.1
2,832,425	-				-1.1
2,832,531	+				+0.9
2,832,535	+				-1.9
2,832,535	+				-1.4
2,832,536	-				-2.1
2,832,536	-				-0.3
2,832,536	-				-2.2
2,832,536	-				-0.8
2,832,536	-				+1.5
2,832,536	-				-1.2
2,832,536	-				-1.7
2,832,536	-				-1.6
2,832,536	-				-1.4
2,832,547	+				-0.3
2,832,547	+				-2.8
2,832,547	+				-2.0
2,832,547	+				+2.5
2,832,547	+				-0.2
2,832,547	+				-2.4
2,832,547	+				-2.4
2,832,548	-				+0.6
2,832,548	-				+2.5
2,832,548	-				-1.6
2,832,548	-				-0.6
2,832,548	-				-1.4
2,832,551	+				+0.1
2,832,551	+				+0.9
2,832,551	+				-1.2
2,832,595	+				-1.3
2,832,595	+				-1.1
2,832,595	+				-0.7
2,832,596	-				-0.7
2,832,596	-				-1.8
2,832,600	+				-2.3
2,832,600	+				-0.4
2,832,600	+				-2.8
2,832,600	+				-0.5
2,832,600	+				-2.7
2,832,600	+				+0.8
2,832,600	+				-2.2
2,832,601	-				-2.6
2,832,601	-				-2.7
2,832,650	+				+1.6
2,832,650	+				-2.0
2,832,650	+				-0.4
2,832,651	-				+0.8
2,832,785	-				+0.5
2,832,785	-				-1.8
2,832,800	+				+1.2
2,832,801	-				-0.8
2,832,801	-				+0.7
2,832,801	-				+0.2
2,832,834	+				-1.8
2,832,878	+				+2.7
2,832,885	+				-0.4
2,832,885	+				+2.5
2,832,885	+				+0.8
2,832,886	-				+0.5
2,832,895	-				+0.3
2,832,895	-				-0.5
2,832,932	-				-1.3
2,833,035	-		Pf1N1B4_2497	0.70	+2.1
2,833,050	+		Pf1N1B4_2497	0.80	-2.7
2,833,050	+		Pf1N1B4_2497	0.80	-0.7
2,833,050	+		Pf1N1B4_2497	0.80	-1.6
2,833,050	+		Pf1N1B4_2497	0.80	-0.0
2,833,050	+		Pf1N1B4_2497	0.80	-2.6
2,833,050	+		Pf1N1B4_2497	0.80	-0.1
2,833,050	+				+1.3
2,833,050	+		Pf1N1B4_2497	0.80	+2.5
2,833,050	+		Pf1N1B4_2497	0.80	+0.0
2,833,050	+		Pf1N1B4_2497	0.80	+0.3
2,833,050	+		Pf1N1B4_2497	0.80	-0.7
2,833,051	-		Pf1N1B4_2497	0.81	-1.8
2,833,051	-		Pf1N1B4_2497	0.81	+0.6
2,833,061	+		Pf1N1B4_2497	0.87	-0.3
2,833,061	+		Pf1N1B4_2497	0.87	+0.2
2,833,061	+		Pf1N1B4_2497	0.87	-1.7
2,833,061	+		Pf1N1B4_2497	0.87	-0.6
2,833,061	+		Pf1N1B4_2497	0.87	-3.3
2,833,061	+		Pf1N1B4_2497	0.87	-3.1
2,833,061	+		Pf1N1B4_2497	0.87	+0.1
2,833,061	+		Pf1N1B4_2497	0.87	+0.7
2,833,061	+		Pf1N1B4_2497	0.87	-0.1
2,833,061	+		Pf1N1B4_2497	0.87	+1.3
2,833,061	+		Pf1N1B4_2497	0.87	-1.0
2,833,061	+		Pf1N1B4_2497	0.87	-1.7
2,833,061	+		Pf1N1B4_2497	0.87	+0.7
2,833,061	+		Pf1N1B4_2497	0.87	+1.7
2,833,061	+		Pf1N1B4_2497	0.87	+1.9
2,833,061	+		Pf1N1B4_2497	0.87	+0.2
2,833,061	+		Pf1N1B4_2497	0.87	-1.0
2,833,061	+		Pf1N1B4_2497	0.87	+1.0
2,833,061	+		Pf1N1B4_2497	0.87	+0.6
2,833,061	+		Pf1N1B4_2497	0.87	-1.1
2,833,061	+		Pf1N1B4_2497	0.87	-0.5
2,833,062	-		Pf1N1B4_2497	0.87	+0.5
2,833,062	-		Pf1N1B4_2497	0.87	-0.0
2,833,062	-		Pf1N1B4_2497	0.87	+1.3
2,833,062	-		Pf1N1B4_2497	0.87	-1.0
2,833,062	-		Pf1N1B4_2497	0.87	-1.6
2,833,062	-		Pf1N1B4_2497	0.87	+0.7
2,833,062	-		Pf1N1B4_2497	0.87	-0.1
2,833,062	-		Pf1N1B4_2497	0.87	-1.0
2,833,062	-		Pf1N1B4_2497	0.87	-1.1
2,833,062	-		Pf1N1B4_2497	0.87	+0.2
2,833,062	-		Pf1N1B4_2497	0.87	-0.5
2,833,062	-		Pf1N1B4_2497	0.87	-2.2
2,833,063	+		Pf1N1B4_2497	0.88	+0.5
2,833,063	+		Pf1N1B4_2497	0.88	-1.2
2,833,063	+		Pf1N1B4_2497	0.88	-1.2
2,833,063	+		Pf1N1B4_2497	0.88	+0.7
2,833,063	+		Pf1N1B4_2497	0.88	+1.1
2,833,063	+		Pf1N1B4_2497	0.88	+0.4
2,833,063	+		Pf1N1B4_2497	0.88	+1.0
2,833,064	-		Pf1N1B4_2497	0.89	-2.3
2,833,064	-		Pf1N1B4_2497	0.89	-2.3
2,833,064	-		Pf1N1B4_2497	0.89	+0.5
2,833,064	-		Pf1N1B4_2497	0.89	-1.7
2,833,064	-		Pf1N1B4_2497	0.89	+0.2
2,833,064	-		Pf1N1B4_2497	0.89	-0.5
2,833,098	+				+0.1
2,833,153	+				-1.3
2,833,153	+				+0.3
2,833,153	+				+0.8
2,833,153	+				-2.7
2,833,153	+				+0.5
2,833,153	+				-1.4
2,833,153	+				-1.1
2,833,153	+				+0.8
2,833,154	-				+3.0
2,833,154	-				-1.9
2,833,154	-				-0.7
2,833,154	-				+0.9
2,833,154	-				+0.3
2,833,154	-				+4.5
2,833,154	-				-1.5
2,833,339	+				+0.7
2,833,339	+				+0.5
2,833,340	-				-1.8
2,833,340	-				-0.3
2,833,340	-				-1.1
2,833,340	-				-0.2
2,833,534	+		Pf1N1B4_2498	0.16	-1.2
2,833,535	-		Pf1N1B4_2498	0.16	+0.6
2,833,556	+		Pf1N1B4_2498	0.17	-2.1
2,833,591	+				-0.5
2,833,591	+		Pf1N1B4_2498	0.19	-2.2
2,833,592	-		Pf1N1B4_2498	0.19	-0.7
2,833,715	-		Pf1N1B4_2498	0.26	+1.6
2,833,715	-		Pf1N1B4_2498	0.26	+0.6
2,833,715	-		Pf1N1B4_2498	0.26	+1.3
2,833,811	-		Pf1N1B4_2498	0.31	+0.6
2,834,119	+		Pf1N1B4_2498	0.48	+0.4
2,834,119	+		Pf1N1B4_2498	0.48	-0.0
2,834,119	+		Pf1N1B4_2498	0.48	-2.3
2,834,119	+		Pf1N1B4_2498	0.48	-0.8
2,834,119	+		Pf1N1B4_2498	0.48	-1.9
2,834,120	-		Pf1N1B4_2498	0.48	+1.6
2,834,120	-		Pf1N1B4_2498	0.48	-0.3
2,834,120	-		Pf1N1B4_2498	0.48	+0.7
2,834,245	+		Pf1N1B4_2498	0.55	-1.4
2,834,245	+		Pf1N1B4_2498	0.55	-0.8
2,834,245	+				+0.2
2,834,245	+		Pf1N1B4_2498	0.55	-1.6
2,834,245	+		Pf1N1B4_2498	0.55	-0.6
2,834,246	-		Pf1N1B4_2498	0.55	+2.5
2,834,246	-		Pf1N1B4_2498	0.55	-0.3
2,834,246	-		Pf1N1B4_2498	0.55	-2.7
2,834,246	-		Pf1N1B4_2498	0.55	+0.9
2,834,246	-		Pf1N1B4_2498	0.55	+0.9
2,834,246	-		Pf1N1B4_2498	0.55	-0.1
2,834,593	+		Pf1N1B4_2498	0.74	-0.3
2,834,593	+		Pf1N1B4_2498	0.74	-0.1
2,834,594	-		Pf1N1B4_2498	0.74	+0.9
2,834,594	-		Pf1N1B4_2498	0.74	-0.2
2,834,851	+		Pf1N1B4_2498	0.88	+2.7
2,834,851	+		Pf1N1B4_2498	0.88	-0.0
2,834,851	+		Pf1N1B4_2498	0.88	-2.8
2,834,852	-		Pf1N1B4_2498	0.88	-0.4
2,834,982	+				+1.1
2,834,983	-				-2.0
2,834,983	-				+2.2
2,834,983	-				+0.8
2,834,983	-				-1.4
2,835,197	+		Pf1N1B4_2499	0.14	-2.7
2,835,197	+		Pf1N1B4_2499	0.14	+2.3
2,835,197	+		Pf1N1B4_2499	0.14	-1.5
2,835,197	+		Pf1N1B4_2499	0.14	-2.4
2,835,197	+		Pf1N1B4_2499	0.14	+2.8
2,835,197	+				-1.1
2,835,197	+		Pf1N1B4_2499	0.14	-1.8
2,835,197	+		Pf1N1B4_2499	0.14	-0.3
2,835,197	+		Pf1N1B4_2499	0.14	-1.3
2,835,197	+		Pf1N1B4_2499	0.14	-2.2
2,835,198	-		Pf1N1B4_2499	0.14	-0.7
2,835,198	-		Pf1N1B4_2499	0.14	-3.2
2,835,198	-		Pf1N1B4_2499	0.14	+0.7
2,835,198	-		Pf1N1B4_2499	0.14	-1.6
2,835,198	-		Pf1N1B4_2499	0.14	+0.2
2,835,198	-		Pf1N1B4_2499	0.14	-1.6
2,835,198	-		Pf1N1B4_2499	0.14	-2.7
2,835,198	-		Pf1N1B4_2499	0.14	-1.9
2,835,198	-		Pf1N1B4_2499	0.14	-2.6
2,835,198	-		Pf1N1B4_2499	0.14	-0.1
2,835,198	-		Pf1N1B4_2499	0.14	+0.9
2,835,198	-		Pf1N1B4_2499	0.14	-0.7
2,835,198	-		Pf1N1B4_2499	0.14	-1.6
2,835,198	-		Pf1N1B4_2499	0.14	-2.7
2,835,198	-		Pf1N1B4_2499	0.14	-2.7
2,835,198	-		Pf1N1B4_2499	0.14	+0.3
2,835,198	-		Pf1N1B4_2499	0.14	-2.4
2,835,198	-		Pf1N1B4_2499	0.14	-0.8
2,835,198	-		Pf1N1B4_2499	0.14	+0.2
2,835,455	+		Pf1N1B4_2499	0.37	-0.7
2,835,456	-		Pf1N1B4_2499	0.37	-1.1
2,835,458	+		Pf1N1B4_2499	0.37	-1.6
2,835,459	-		Pf1N1B4_2499	0.37	-0.3
2,835,459	-		Pf1N1B4_2499	0.37	-1.6
2,835,519	-		Pf1N1B4_2499	0.42	-3.3
2,835,558	+		Pf1N1B4_2499	0.46	+2.5
2,835,790	-		Pf1N1B4_2499	0.66	-2.8
2,835,904	-		Pf1N1B4_2499	0.76	+1.6
2,835,905	+		Pf1N1B4_2499	0.76	+0.9
2,835,906	-		Pf1N1B4_2499	0.76	-2.0