Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1864

Experiment: nitrogen source nitrite 0.5mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrogen source nitrite 0.5mM
2,132,688	-		Pf1N1B4_1862	0.87	+1.1
2,132,729	+				+1.3
2,132,729	+				+1.4
2,132,729	+				-1.1
2,132,729	+				+0.3
2,132,730	-				-0.0
2,132,730	-				-1.0
2,132,730	-				+0.9
2,132,734	+				-0.2
2,132,734	+				+0.5
2,132,734	+				+0.2
2,132,734	+				-0.0
2,132,734	+				-0.7
2,132,734	+				+0.5
2,132,734	+				-1.0
2,132,734	+				+1.1
2,132,734	+				-0.3
2,132,734	+				-0.6
2,132,734	+				+1.6
2,132,734	+				+0.4
2,132,735	-				+1.0
2,132,735	-				-0.3
2,132,735	-				+0.6
2,132,735	-				+0.4
2,132,735	-				-0.4
2,132,735	-				+1.1
2,132,735	-				-0.5
2,132,738	+				+0.7
2,132,738	+				-0.6
2,132,738	+				-1.2
2,132,738	+				-2.1
2,132,738	+				+0.6
2,132,738	+				+1.3
2,132,738	+				+0.7
2,132,738	+				-0.2
2,132,738	+				-0.9
2,132,738	+				+0.8
2,132,739	-				+1.6
2,132,739	-				+0.1
2,132,739	-				+0.9
2,132,739	-				-2.3
2,132,739	-				+0.8
2,132,739	-				-0.2
2,132,739	-				-0.2
2,132,739	-				-0.0
2,132,739	-				+0.1
2,132,741	+				+0.9
2,132,741	+				-0.7
2,132,741	+				+0.1
2,132,742	-				+0.4
2,132,742	-				+1.5
2,132,742	-				+0.3
2,132,772	+				+0.4
2,132,772	+				+0.7
2,132,772	+				-2.3
2,132,772	+				+0.6
2,132,780	+				-1.4
2,132,780	+				-0.0
2,132,780	+				-0.3
2,132,780	+				+0.2
2,132,780	+				+0.4
2,132,780	+				-0.3
2,132,780	+				-0.0
2,132,781	-				-0.6
2,132,781	-				+1.1
2,132,781	-				+0.8
2,132,781	-				+1.4
2,132,781	-				-1.3
2,132,781	-				-2.2
2,132,781	-				+1.1
2,132,781	-				-0.6
2,132,781	-				-0.4
2,132,781	-				-1.2
2,132,784	+				+1.3
2,132,784	+				-0.4
2,132,784	+				-0.3
2,132,784	+				+0.6
2,132,784	+				+0.3
2,132,784	+				+1.1
2,132,784	+				-1.6
2,132,784	+				-0.7
2,132,784	+				+0.7
2,132,784	+				+1.0
2,132,784	+				+1.0
2,132,784	+				+0.6
2,132,784	+				+0.9
2,132,784	+				-0.3
2,132,784	+				-0.6
2,132,784	+				+0.3
2,132,785	-				+0.7
2,132,785	-				+1.0
2,132,785	-				-0.5
2,132,785	-				+0.6
2,132,785	-				-1.9
2,132,785	-				-0.4
2,132,796	+				+1.3
2,132,796	+				-0.9
2,132,797	-				+0.7
2,132,873	+				+0.6
2,132,873	+		Pf1N1B4_1863	0.12	-1.5
2,132,873	+		Pf1N1B4_1863	0.12	-0.2
2,132,873	+		Pf1N1B4_1863	0.12	+1.3
2,132,873	+		Pf1N1B4_1863	0.12	+0.8
2,132,874	-		Pf1N1B4_1863	0.12	+1.6
2,132,874	-		Pf1N1B4_1863	0.12	+0.3
2,132,874	-		Pf1N1B4_1863	0.12	-0.5
2,132,874	-		Pf1N1B4_1863	0.12	-0.5
2,132,874	-		Pf1N1B4_1863	0.12	-0.8
2,132,874	-		Pf1N1B4_1863	0.12	-0.1
2,132,874	-		Pf1N1B4_1863	0.12	+0.1
2,133,037	+		Pf1N1B4_1863	0.38	+0.6
2,133,038	-		Pf1N1B4_1863	0.38	+0.1
2,133,184	+		Pf1N1B4_1863	0.61	-3.6
2,133,184	+		Pf1N1B4_1863	0.61	+1.2
2,133,184	+		Pf1N1B4_1863	0.61	+0.6
2,133,184	+		Pf1N1B4_1863	0.61	+0.8
2,133,184	+		Pf1N1B4_1863	0.61	+0.1
2,133,184	+		Pf1N1B4_1863	0.61	-0.7
2,133,184	+		Pf1N1B4_1863	0.61	-1.6
2,133,184	+		Pf1N1B4_1863	0.61	+0.4
2,133,185	-		Pf1N1B4_1863	0.61	+1.1
2,133,185	-		Pf1N1B4_1863	0.61	-0.2
2,133,185	-		Pf1N1B4_1863	0.61	-0.7
2,133,185	-		Pf1N1B4_1863	0.61	+1.4
2,133,193	+		Pf1N1B4_1863	0.62	-0.7
2,133,194	-		Pf1N1B4_1863	0.62	+0.3
2,133,268	-		Pf1N1B4_1863	0.74	+0.7
2,133,268	-		Pf1N1B4_1863	0.74	+0.2
2,133,276	+		Pf1N1B4_1863	0.75	-1.1
2,133,277	-		Pf1N1B4_1863	0.75	-2.4
2,133,300	+		Pf1N1B4_1863	0.79	-1.4
2,133,300	+		Pf1N1B4_1863	0.79	-1.5
2,133,300	+		Pf1N1B4_1863	0.79	-0.1
2,133,300	+		Pf1N1B4_1863	0.79	-1.2
2,133,300	+		Pf1N1B4_1863	0.79	-0.3
2,133,300	+		Pf1N1B4_1863	0.79	-1.3
2,133,300	+		Pf1N1B4_1863	0.79	+1.0
2,133,301	-		Pf1N1B4_1863	0.79	-1.2
2,133,301	-		Pf1N1B4_1863	0.79	+1.3
2,133,301	-		Pf1N1B4_1863	0.79	+0.5
2,133,304	+		Pf1N1B4_1863	0.80	-2.6
2,133,304	+		Pf1N1B4_1863	0.80	-0.4
2,133,304	+		Pf1N1B4_1863	0.80	+1.1
2,133,304	+		Pf1N1B4_1863	0.80	-1.6
2,133,304	+		Pf1N1B4_1863	0.80	-0.1
2,133,304	+		Pf1N1B4_1863	0.80	-0.0
2,133,304	+		Pf1N1B4_1863	0.80	+1.6
2,133,304	+		Pf1N1B4_1863	0.80	+0.4
2,133,304	+		Pf1N1B4_1863	0.80	-0.4
2,133,304	+		Pf1N1B4_1863	0.80	-1.7
2,133,304	+		Pf1N1B4_1863	0.80	-2.0
2,133,304	+		Pf1N1B4_1863	0.80	-1.0
2,133,305	-		Pf1N1B4_1863	0.80	+0.3
2,133,305	-		Pf1N1B4_1863	0.80	-0.4
2,133,305	-		Pf1N1B4_1863	0.80	-2.4
2,133,305	-		Pf1N1B4_1863	0.80	-2.3
2,133,305	-		Pf1N1B4_1863	0.80	-0.7
2,133,305	-		Pf1N1B4_1863	0.80	+0.0
2,133,305	-				+2.1
2,133,324	+		Pf1N1B4_1863	0.83	+0.1
2,133,324	+		Pf1N1B4_1863	0.83	+0.6
2,133,420	-				-0.2
2,133,443	-				+1.3
2,133,504	+				+1.7
2,133,505	-				-1.0
2,133,505	-				-1.9
2,133,505	-				-1.2
2,133,505	-				-1.9
2,133,505	-				+1.6
2,133,539	+				+0.0
2,133,540	-				-0.3
2,133,540	-				-0.1
2,133,540	-				+1.0
2,133,544	+				+0.6
2,133,545	-				+1.8
2,133,545	-				-0.6
2,133,545	-				-0.4
2,133,545	-				-1.7
2,133,545	-				-0.8
2,133,555	+				+1.5
2,133,556	-				+1.3
2,133,680	+				+0.1
2,133,680	+				-1.1
2,133,680	+				+0.6
2,133,680	+				+1.1
2,133,680	+				-1.3
2,133,680	+				+0.5
2,133,680	+				-0.3
2,133,680	+				-0.2
2,133,681	-				+0.7
2,133,681	-				+0.1
2,133,788	+		Pf1N1B4_1864	0.18	-1.4
2,133,788	+		Pf1N1B4_1864	0.18	+0.1
2,133,789	-		Pf1N1B4_1864	0.18	+0.6
2,133,789	-		Pf1N1B4_1864	0.18	+0.4
2,133,854	+		Pf1N1B4_1864	0.26	+1.0
2,133,854	+		Pf1N1B4_1864	0.26	-1.0
2,133,855	-		Pf1N1B4_1864	0.26	-1.4
2,133,855	-		Pf1N1B4_1864	0.26	+0.0
2,134,100	+		Pf1N1B4_1864	0.58	+0.3
2,134,100	+		Pf1N1B4_1864	0.58	-1.8
2,134,100	+		Pf1N1B4_1864	0.58	+0.1
2,134,100	+		Pf1N1B4_1864	0.58	+0.7
2,134,100	+		Pf1N1B4_1864	0.58	-0.4
2,134,100	+		Pf1N1B4_1864	0.58	-3.3
2,134,101	-		Pf1N1B4_1864	0.58	+1.0
2,134,101	-		Pf1N1B4_1864	0.58	-1.3
2,134,101	-		Pf1N1B4_1864	0.58	+0.6
2,134,101	-		Pf1N1B4_1864	0.58	-0.3
2,134,101	-		Pf1N1B4_1864	0.58	-2.0
2,134,101	-		Pf1N1B4_1864	0.58	-0.0
2,134,101	-		Pf1N1B4_1864	0.58	+1.1
2,134,101	-		Pf1N1B4_1864	0.58	-0.2
2,134,101	-		Pf1N1B4_1864	0.58	+0.1
2,134,112	+		Pf1N1B4_1864	0.59	-0.9
2,134,112	+		Pf1N1B4_1864	0.59	+0.3
2,134,113	-		Pf1N1B4_1864	0.60	-0.9
2,134,191	-		Pf1N1B4_1864	0.70	+0.3
2,134,256	+		Pf1N1B4_1864	0.78	+0.8
2,134,256	+		Pf1N1B4_1864	0.78	+0.6
2,134,257	-		Pf1N1B4_1864	0.78	-1.4
2,134,257	-		Pf1N1B4_1864	0.78	+0.5
2,134,257	-		Pf1N1B4_1864	0.78	-1.4
2,134,257	-		Pf1N1B4_1864	0.78	+0.3
2,134,257	-		Pf1N1B4_1864	0.78	-0.1
2,134,257	-		Pf1N1B4_1864	0.78	-0.7
2,134,414	+				+1.0
2,134,432	-				-0.0
2,134,487	+				-0.4
2,134,487	+				-0.1
2,134,487	+				-0.5
2,134,487	+				-0.7
2,134,487	+				+2.3
2,134,487	+				-0.6
2,134,487	+				+0.4
2,134,487	+				-0.3
2,134,488	-				-0.0
2,134,488	-				-0.1
2,134,488	-				-1.4
2,134,488	-				+0.6
2,134,488	-				-0.6
2,134,488	-				+0.4
2,134,488	-				-0.9
2,134,488	-				-1.6
2,134,488	-				+0.4
2,134,491	+				+0.4
2,134,491	+				-0.3
2,134,491	+				+0.4
2,134,491	+				-0.7
2,134,491	+				+2.1
2,134,491	+				+1.0
2,134,491	+				+0.7
2,134,491	+				-0.5
2,134,491	+				+0.6
2,134,492	-				-0.4
2,134,492	-				-1.6
2,134,492	-				-0.5
2,134,492	-				-0.4
2,134,492	-				+0.6
2,134,492	-				+0.5
2,134,492	-				+0.7
2,134,492	-				+1.2
2,134,492	-				-1.2
2,134,661	+		Pf1N1B4_1865	0.26	-0.3
2,134,662	-		Pf1N1B4_1865	0.26	+0.1
2,134,662	-		Pf1N1B4_1865	0.26	-1.6
2,134,674	+		Pf1N1B4_1865	0.28	-0.2
2,134,674	+		Pf1N1B4_1865	0.28	-2.0
2,134,675	-		Pf1N1B4_1865	0.28	-0.2
2,134,675	-		Pf1N1B4_1865	0.28	-2.2
2,134,675	-				+0.4
2,134,689	+		Pf1N1B4_1865	0.30	-0.2
2,134,689	+		Pf1N1B4_1865	0.30	+0.7
2,134,690	-		Pf1N1B4_1865	0.30	+0.2
2,134,932	+		Pf1N1B4_1865	0.66	-0.5
2,134,932	+		Pf1N1B4_1865	0.66	-0.5
2,134,932	+		Pf1N1B4_1865	0.66	-0.6
2,134,932	+		Pf1N1B4_1865	0.66	+0.6
2,134,933	-		Pf1N1B4_1865	0.66	+0.2
2,134,933	-		Pf1N1B4_1865	0.66	-0.8
2,134,933	-		Pf1N1B4_1865	0.66	+0.3
2,134,982	+		Pf1N1B4_1865	0.73	-0.9
2,134,983	-		Pf1N1B4_1865	0.74	+0.9
2,135,065	+		Pf1N1B4_1865	0.86	-0.1
2,135,065	+		Pf1N1B4_1865	0.86	+1.3
2,135,066	-		Pf1N1B4_1865	0.86	-1.1
2,135,095	-				+0.4
2,135,299	+		Pf1N1B4_1866	0.14	+0.6
2,135,299	+		Pf1N1B4_1866	0.14	+2.1
2,135,299	+		Pf1N1B4_1866	0.14	+0.2
2,135,299	+		Pf1N1B4_1866	0.14	+1.4
2,135,299	+		Pf1N1B4_1866	0.14	+0.9
2,135,300	-		Pf1N1B4_1866	0.14	+0.2
2,135,344	+		Pf1N1B4_1866	0.18	-0.6