Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1974

Experiment: nitrogen source nitrate 5mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrogen source nitrate 5mM
2,256,480	-		Pf1N1B4_1973	0.55	-2.0
2,256,548	+		Pf1N1B4_1973	0.58	-1.7
2,256,549	-		Pf1N1B4_1973	0.58	+0.5
2,256,549	-		Pf1N1B4_1973	0.58	-0.3
2,256,549	-		Pf1N1B4_1973	0.58	-0.8
2,256,549	-		Pf1N1B4_1973	0.58	-0.8
2,256,549	-		Pf1N1B4_1973	0.58	-0.5
2,256,573	-		Pf1N1B4_1973	0.59	-0.4
2,256,590	+		Pf1N1B4_1973	0.60	+1.0
2,256,590	+		Pf1N1B4_1973	0.60	+1.0
2,256,591	-		Pf1N1B4_1973	0.60	+1.6
2,256,591	-		Pf1N1B4_1973	0.60	-0.0
2,256,591	-		Pf1N1B4_1973	0.60	-1.0
2,256,596	+		Pf1N1B4_1973	0.60	-0.8
2,256,597	-		Pf1N1B4_1973	0.60	+0.1
2,256,650	+				-0.7
2,256,650	+		Pf1N1B4_1973	0.63	-0.0
2,256,650	+		Pf1N1B4_1973	0.63	+0.3
2,256,650	+		Pf1N1B4_1973	0.63	+1.2
2,256,650	+		Pf1N1B4_1973	0.63	-0.5
2,256,651	-		Pf1N1B4_1973	0.63	-0.7
2,256,651	-		Pf1N1B4_1973	0.63	+1.4
2,256,651	-		Pf1N1B4_1973	0.63	-0.9
2,256,651	-		Pf1N1B4_1973	0.63	-1.5
2,256,651	-		Pf1N1B4_1973	0.63	+0.3
2,256,651	-		Pf1N1B4_1973	0.63	+0.1
2,256,703	+		Pf1N1B4_1973	0.65	-0.3
2,256,704	-		Pf1N1B4_1973	0.65	-1.7
2,256,707	+		Pf1N1B4_1973	0.65	-0.7
2,256,707	+		Pf1N1B4_1973	0.65	+0.5
2,256,707	+		Pf1N1B4_1973	0.65	-1.5
2,256,707	+		Pf1N1B4_1973	0.65	+0.3
2,256,707	+		Pf1N1B4_1973	0.65	+0.7
2,256,707	+		Pf1N1B4_1973	0.65	-2.0
2,256,707	+		Pf1N1B4_1973	0.65	-0.1
2,256,707	+		Pf1N1B4_1973	0.65	+1.1
2,256,707	+		Pf1N1B4_1973	0.65	-1.0
2,256,707	+		Pf1N1B4_1973	0.65	+0.4
2,256,707	+		Pf1N1B4_1973	0.65	-0.5
2,256,707	+		Pf1N1B4_1973	0.65	-0.9
2,256,707	+				+0.1
2,256,707	+		Pf1N1B4_1973	0.65	-0.1
2,256,707	+		Pf1N1B4_1973	0.65	+1.1
2,256,707	+		Pf1N1B4_1973	0.65	-0.5
2,256,707	+		Pf1N1B4_1973	0.65	+1.1
2,256,707	+		Pf1N1B4_1973	0.65	+0.5
2,256,707	+		Pf1N1B4_1973	0.65	+1.7
2,256,707	+				+0.5
2,256,707	+		Pf1N1B4_1973	0.65	+1.1
2,256,708	-		Pf1N1B4_1973	0.65	+0.9
2,256,708	-		Pf1N1B4_1973	0.65	-1.2
2,256,708	-		Pf1N1B4_1973	0.65	-0.1
2,256,708	-		Pf1N1B4_1973	0.65	-1.7
2,256,708	-		Pf1N1B4_1973	0.65	+1.5
2,256,708	-		Pf1N1B4_1973	0.65	-2.0
2,256,708	-		Pf1N1B4_1973	0.65	-0.3
2,256,708	-		Pf1N1B4_1973	0.65	+1.8
2,256,708	-		Pf1N1B4_1973	0.65	+0.7
2,256,708	-		Pf1N1B4_1973	0.65	-2.0
2,256,708	-		Pf1N1B4_1973	0.65	-1.0
2,256,708	-		Pf1N1B4_1973	0.65	-0.8
2,256,708	-		Pf1N1B4_1973	0.65	+0.9
2,256,708	-		Pf1N1B4_1973	0.65	+0.7
2,256,708	-		Pf1N1B4_1973	0.65	-0.0
2,256,708	-		Pf1N1B4_1973	0.65	-0.2
2,256,777	-		Pf1N1B4_1973	0.69	-0.2
2,256,795	-		Pf1N1B4_1973	0.70	-0.5
2,256,795	-		Pf1N1B4_1973	0.70	-1.6
2,256,795	-		Pf1N1B4_1973	0.70	-1.1
2,256,833	+		Pf1N1B4_1973	0.71	-1.3
2,256,834	-		Pf1N1B4_1973	0.71	+0.3
2,256,894	-		Pf1N1B4_1973	0.74	-0.6
2,256,894	-		Pf1N1B4_1973	0.74	-2.0
2,256,896	+				+2.1
2,256,896	+		Pf1N1B4_1973	0.74	-1.5
2,256,896	+		Pf1N1B4_1973	0.74	-0.2
2,256,896	+		Pf1N1B4_1973	0.74	+0.7
2,256,896	+		Pf1N1B4_1973	0.74	-0.5
2,256,896	+		Pf1N1B4_1973	0.74	+0.1
2,256,896	+		Pf1N1B4_1973	0.74	+1.4
2,256,896	+		Pf1N1B4_1973	0.74	+1.5
2,256,896	+		Pf1N1B4_1973	0.74	-1.1
2,256,896	+		Pf1N1B4_1973	0.74	-0.8
2,256,896	+		Pf1N1B4_1973	0.74	+1.8
2,256,896	+		Pf1N1B4_1973	0.74	+0.4
2,256,897	-		Pf1N1B4_1973	0.74	-1.4
2,256,897	-		Pf1N1B4_1973	0.74	+0.0
2,256,897	-		Pf1N1B4_1973	0.74	-1.0
2,256,897	-		Pf1N1B4_1973	0.74	-0.5
2,256,899	+		Pf1N1B4_1973	0.74	-0.3
2,256,899	+		Pf1N1B4_1973	0.74	+0.5
2,256,899	+		Pf1N1B4_1973	0.74	-1.7
2,256,899	+		Pf1N1B4_1973	0.74	-2.3
2,256,899	+		Pf1N1B4_1973	0.74	+0.5
2,256,899	+		Pf1N1B4_1973	0.74	-1.9
2,256,900	-		Pf1N1B4_1973	0.74	-0.9
2,256,920	+		Pf1N1B4_1973	0.75	-0.6
2,256,936	+		Pf1N1B4_1973	0.76	+1.4
2,256,937	-		Pf1N1B4_1973	0.76	+1.4
2,256,937	-		Pf1N1B4_1973	0.76	+0.7
2,256,983	+		Pf1N1B4_1973	0.78	-0.5
2,256,983	+		Pf1N1B4_1973	0.78	+0.3
2,256,983	+		Pf1N1B4_1973	0.78	+0.3
2,256,984	-		Pf1N1B4_1973	0.78	+0.0
2,256,984	-		Pf1N1B4_1973	0.78	+0.1
2,256,984	-		Pf1N1B4_1973	0.78	+0.2
2,256,984	-		Pf1N1B4_1973	0.78	-0.7
2,257,091	+		Pf1N1B4_1973	0.83	+0.3
2,257,091	+		Pf1N1B4_1973	0.83	+1.3
2,257,091	+		Pf1N1B4_1973	0.83	+0.1
2,257,092	-		Pf1N1B4_1973	0.83	-1.0
2,257,092	-		Pf1N1B4_1973	0.83	+0.5
2,257,092	-		Pf1N1B4_1973	0.83	-0.9
2,257,092	-		Pf1N1B4_1973	0.83	+0.4
2,257,138	+		Pf1N1B4_1973	0.86	-1.5
2,257,139	-		Pf1N1B4_1973	0.86	+0.1
2,257,224	-		Pf1N1B4_1973	0.90	+0.2
2,257,227	+		Pf1N1B4_1973	0.90	+0.6
2,257,227	+		Pf1N1B4_1973	0.90	-2.1
2,257,227	+		Pf1N1B4_1973	0.90	+2.5
2,257,227	+		Pf1N1B4_1973	0.90	-1.1
2,257,228	-		Pf1N1B4_1973	0.90	+1.8
2,257,228	-		Pf1N1B4_1973	0.90	-0.8
2,257,241	+				+0.5
2,257,241	+				-0.2
2,257,241	+				+0.5
2,257,241	+				-0.4
2,257,241	+				-2.2
2,257,241	+				+0.0
2,257,241	+				+0.9
2,257,241	+				+0.3
2,257,241	+				-1.0
2,257,241	+				+0.2
2,257,241	+				+1.3
2,257,241	+				+0.6
2,257,241	+				+1.4
2,257,242	-				-1.2
2,257,303	+				-1.1
2,257,310	+				+0.0
2,257,310	+				+0.1
2,257,310	+				-0.3
2,257,311	-				+1.4
2,257,311	-				-0.1
2,257,311	-				-2.1
2,257,311	-				+0.7
2,257,311	-				+0.5
2,257,355	+				-0.0
2,257,355	+				+0.7
2,257,394	-				+0.3
2,257,410	+				+0.0
2,257,411	-				+0.8
2,257,432	+				-0.4
2,257,432	+				-0.7
2,257,433	-				+0.5
2,257,433	-				+0.4
2,257,578	+		Pf1N1B4_1974	0.21	-1.0
2,257,941	-		Pf1N1B4_1974	0.78	-1.0
2,258,034	+				-2.1
2,258,034	+				+1.5
2,258,035	-				-1.9
2,258,035	-				-0.5
2,258,035	-				+1.0
2,258,035	-				+0.9
2,258,117	+				-0.0
2,258,117	+				+0.2
2,258,117	+				-0.4
2,258,117	+				-0.3
2,258,118	-				+0.0
2,258,118	-				+0.0
2,258,118	-				+1.1
2,258,118	-				+1.5
2,258,118	-				-0.4
2,258,179	-				+0.2
2,258,575	+		Pf1N1B4_1975	0.74	+0.3
2,258,576	-		Pf1N1B4_1975	0.74	-1.5
2,258,576	-		Pf1N1B4_1975	0.74	+0.8
2,258,576	-		Pf1N1B4_1975	0.74	-1.0
2,258,695	+				-2.3
2,258,695	+				-0.1
2,258,695	+				-0.5
2,258,821	+				-1.0
2,258,821	+				+1.7
2,258,821	+				+0.5
2,258,821	+				+1.5
2,258,821	+				-0.6
2,258,821	+				+0.5
2,258,821	+				+0.5
2,258,821	+				+0.6
2,258,822	-				-1.3
2,258,822	-				-0.5
2,258,822	-				+0.7
2,258,822	-				+0.5
2,258,822	-				+0.5
2,258,822	-				-0.6
2,258,822	-				-0.3
2,258,822	-				-0.5
2,259,024	+		Pf1N1B4_1976	0.15	+0.0
2,259,024	+		Pf1N1B4_1976	0.15	-0.7
2,259,024	+		Pf1N1B4_1976	0.15	+1.2
2,259,024	+				-1.3
2,259,025	-		Pf1N1B4_1976	0.15	-1.6
2,259,025	-		Pf1N1B4_1976	0.15	-1.8
2,259,025	-		Pf1N1B4_1976	0.15	+0.5
2,259,025	-		Pf1N1B4_1976	0.15	+0.2
2,259,025	-		Pf1N1B4_1976	0.15	-0.7
2,259,025	-		Pf1N1B4_1976	0.15	+2.3