Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4264

Experiment: BHIS with Lithocholic 0.4 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Lithocholic 0.4 mg/ml
5,614,980	-				-0.6
5,615,098	-				-1.0
5,615,184	+		BT4264	0.29	-2.3
5,615,184	+		BT4264	0.29	-4.1
5,615,185	-		BT4264	0.29	-1.5
5,615,185	-		BT4264	0.29	-4.3
5,615,185	-		BT4264	0.29	-2.4
5,615,185	-		BT4264	0.29	-0.4
5,615,205	-		BT4264	0.33	-2.0
5,615,294	+		BT4264	0.53	-1.6
5,615,295	-		BT4264	0.53	-0.6
5,615,306	-		BT4264	0.56	-3.9
5,615,346	-		BT4264	0.65	-3.6
5,615,364	-		BT4264	0.69	-5.0
5,615,364	-		BT4264	0.69	-2.5
5,615,364	-		BT4264	0.69	-2.7
5,615,364	-		BT4264	0.69	-0.6
5,615,370	-		BT4264	0.70	-2.9
5,615,448	+		BT4264	0.88	-3.0
5,615,510	+				-0.0
5,615,511	-				-2.2
5,615,543	+				-0.8
5,615,543	+				-2.1
5,615,543	+				-2.1
5,615,551	-				-2.1
5,615,609	-				-1.2
5,615,930	-		BT4265	0.15	-0.8
5,616,340	-		BT4265	0.41	-1.3