Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1680

Experiment: BHIS with Lithocholic 0.4 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Lithocholic 0.4 mg/ml
2,072,120	-		BT1679	0.66	-2.8
2,072,143	-		BT1679	0.73	-0.0
2,072,200	-				-2.2
2,072,212	-				-0.1
2,072,470	-		BT1680	0.44	-2.7
2,072,487	-		BT1680	0.47	-1.7
2,072,640	-		BT1680	0.75	-1.2
2,072,646	-		BT1680	0.77	+0.3
2,072,646	-		BT1680	0.77	-1.1
2,072,707	-		BT1680	0.88	-1.2
2,072,796	-				+1.7
2,072,796	-				+1.3
2,072,796	-				-2.2
2,072,800	-				+0.1
2,072,826	-				+0.4
2,072,844	-				-1.3
2,072,844	-				+1.3
2,072,861	+				-2.8
2,072,870	+				+1.0
2,072,964	+				-1.1
2,072,992	+				-1.1
2,072,993	-				-0.9
2,073,077	-				-0.3
2,073,078	-				-0.7
2,073,137	-				-1.0
2,073,150	+				-0.1
2,073,173	+				-2.6
2,073,206	+				+1.3
2,073,409	+		BT1681	0.44	-2.6
2,073,447	-		BT1681	0.51	-2.1
2,073,447	-		BT1681	0.51	-0.3
2,073,461	+		BT1681	0.54	-2.5
2,073,582	-		BT1681	0.76	+0.6
2,073,604	+		BT1681	0.80	-0.7
2,073,636	+		BT1681	0.86	-1.9
2,073,649	+		BT1681	0.88	-0.3
2,073,651	+		BT1681	0.89	+1.1
2,073,652	-		BT1681	0.89	+0.6
2,073,658	+				-1.3
2,073,658	+				+1.5
2,073,718	+				+0.3
2,073,719	-				+0.7
2,073,751	-				-0.3