Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1395

Experiment: BHIS with Lithocholic 0.4 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Lithocholic 0.4 mg/ml
1,721,124	-		BT1393	0.67	-0.1
1,721,218	+		BT1393	0.75	-0.4
1,721,317	-		BT1393	0.83	+0.2
1,721,457	+				-1.6
1,721,458	-				+0.6
1,721,574	-				-0.6
1,721,637	-				+0.2
1,721,641	+				-2.4
1,721,686	+				-1.1
1,721,687	-				-2.0
1,721,841	+		BT1394	0.47	-0.6
1,721,841	+		BT1394	0.47	-0.7
1,721,842	-		BT1394	0.47	-0.4
1,721,899	-		BT1394	0.62	+1.7
1,721,956	+		BT1394	0.76	-2.4
1,721,957	-		BT1394	0.77	-0.8
1,722,038	+				+1.1
1,722,202	-		BT1395	0.14	-0.1
1,722,293	-		BT1395	0.22	-0.4
1,722,296	-		BT1395	0.23	-1.4
1,722,418	+		BT1395	0.34	-0.8
1,722,608	-		BT1395	0.53	-3.1
1,722,614	-		BT1395	0.53	+1.2
1,722,638	-		BT1395	0.55	-0.4
1,722,670	+		BT1395	0.59	-2.1
1,722,708	+		BT1395	0.62	-1.8
1,722,804	+		BT1395	0.71	-0.7
1,722,880	+				-0.8
1,723,105	+				+0.0
1,723,106	-				+3.5
1,723,108	+				-1.4
1,723,188	+				+0.2
1,723,251	+				+0.0
1,723,488	+				-0.4
1,723,495	-		BT1396	0.24	-2.2
1,723,603	+		BT1396	0.35	+1.2
1,723,604	-		BT1396	0.36	-1.3
1,723,638	+		BT1396	0.39	-1.0
1,723,638	+		BT1396	0.39	-0.8
1,723,784	-		BT1396	0.55	-1.1
1,723,784	-		BT1396	0.55	-1.8
1,723,815	+		BT1396	0.58	+0.5
1,723,846	+		BT1396	0.62	-1.1
1,723,890	+		BT1396	0.67	-1.1
1,723,938	+		BT1396	0.72	-2.1
1,723,939	-		BT1396	0.72	-1.6
1,723,971	+		BT1396	0.75	-1.1