Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3869

Experiment: BHIS with Deoxycholic 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Deoxycholic 0.2 mg/ml
5,041,013	+		BT3868	0.66	-0.0
5,041,043	+		BT3868	0.68	+2.3
5,041,043	+		BT3868	0.68	+1.1
5,041,070	+		BT3868	0.69	-0.0
5,041,070	+		BT3868	0.69	-0.3
5,041,125	-		BT3868	0.72	+0.4
5,041,125	-		BT3868	0.72	-0.4
5,041,154	+		BT3868	0.73	-1.0
5,041,187	-		BT3868	0.75	-2.7
5,041,187	-		BT3868	0.75	-0.4
5,041,187	-		BT3868	0.75	-0.8
5,041,327	+		BT3868	0.82	-0.0
5,041,457	+		BT3868	0.89	-1.6
5,041,490	-				+0.1
5,041,546	-				-0.5
5,041,546	-				-0.7
5,041,620	+				-0.6
5,041,667	-				+0.2
5,041,733	-				-1.2
5,041,838	-				-0.3
5,042,070	+		BT3869	0.31	-1.4
5,042,083	+		BT3869	0.33	-1.6
5,042,291	-		BT3869	0.60	+0.4
5,042,438	-		BT3869	0.79	+0.1
5,042,445	+		BT3869	0.79	-0.7
5,042,445	+		BT3869	0.79	+0.6
5,042,582	+				+0.2
5,042,582	+				-0.8
5,042,583	-				-1.7
5,042,602	-				-0.8
5,042,620	-				-1.5
5,042,651	-				-1.6
5,042,651	-				-0.8
5,042,726	+		BT3870	0.21	-0.7
5,042,726	+		BT3870	0.21	-0.5
5,042,726	+		BT3870	0.21	+1.5
5,042,863	+		BT3870	0.46	-2.9
5,042,863	+		BT3870	0.46	-0.5
5,042,882	+		BT3870	0.49	+0.9
5,042,882	+		BT3870	0.49	-0.0
5,042,882	+		BT3870	0.49	+2.1
5,042,883	-		BT3870	0.50	-0.5
5,042,883	-		BT3870	0.50	-1.6
5,042,884	+		BT3870	0.50	-1.2
5,042,903	-		BT3870	0.53	-0.0
5,042,930	+		BT3870	0.58	+1.5
5,042,930	+		BT3870	0.58	-1.5
5,042,930	+		BT3870	0.58	-1.8
5,042,931	-		BT3870	0.58	-1.4
5,042,981	+		BT3870	0.67	-0.9
5,043,583	+				-1.5