Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3402

Experiment: BHIS with Deoxycholic 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Deoxycholic 0.2 mg/ml
4,380,518	+		BT3401	0.32	+1.3
4,380,518	+		BT3401	0.32	+1.6
4,380,611	-		BT3401	0.40	-0.7
4,380,649	-		BT3401	0.44	-0.9
4,380,660	-		BT3401	0.45	+1.6
4,380,664	-		BT3401	0.45	-2.0
4,380,700	-		BT3401	0.48	-1.6
4,380,702	-		BT3401	0.48	+1.2
4,380,771	-		BT3401	0.54	-0.1
4,380,819	-		BT3401	0.59	+0.6
4,380,826	+		BT3401	0.59	+2.2
4,380,858	-		BT3401	0.62	+0.8
4,380,917	+		BT3401	0.67	-1.0
4,380,940	-		BT3401	0.69	-1.0
4,380,958	-		BT3401	0.71	-1.0
4,380,987	+		BT3401	0.73	+0.1
4,381,009	-		BT3401	0.75	-0.0
4,381,066	-		BT3401	0.80	+0.6
4,381,167	-		BT3401	0.89	-2.5
4,381,291	-				-1.8
4,381,291	-				-2.8
4,381,294	+				+0.3
4,381,294	+				-0.7
4,381,295	-				-0.1
4,381,313	+				-0.4
4,381,314	-				-1.7
4,381,315	+				-1.2
4,381,316	-				-2.5
4,381,332	-				+0.0