Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2604

Experiment: BHIS with Deoxycholic 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Deoxycholic 0.2 mg/ml
3,245,088	+		BT2603	0.60	+0.7
3,245,159	-		BT2603	0.63	-3.1
3,245,228	+		BT2603	0.66	+0.5
3,245,236	+		BT2603	0.66	+1.2
3,245,249	+		BT2603	0.67	-1.7
3,245,250	-		BT2603	0.67	+0.1
3,245,321	+		BT2603	0.70	-0.3
3,245,321	+		BT2603	0.70	-1.3
3,245,322	-		BT2603	0.70	+0.3
3,245,336	+		BT2603	0.70	+1.1
3,245,382	-		BT2603	0.72	-1.3
3,245,571	-		BT2603	0.80	+0.2
3,245,710	+		BT2603	0.86	-0.4
3,245,717	-		BT2603	0.86	-1.5
3,245,809	+		BT2603	0.90	-2.7
3,245,922	-				-0.9
3,246,014	+				-2.7
3,246,014	+				-0.7
3,246,014	+				+0.6
3,246,015	-				+0.1
3,246,040	-				-1.5
3,246,080	+				-0.7
3,246,242	+		BT2604	0.28	-0.7
3,246,242	+		BT2604	0.28	-0.9
3,246,244	+		BT2604	0.28	-1.9
3,246,247	-		BT2604	0.28	-0.7
3,246,485	+		BT2604	0.62	-1.5
3,246,672	+		BT2604	0.88	-1.4
3,246,694	+				-0.2
3,246,716	+				-1.2
3,246,716	+				-1.1
3,246,741	+				-1.2
3,246,741	+				-0.7
3,246,784	+				-0.4
3,246,784	+				-0.9
3,246,784	+				+0.5
3,246,789	+				-0.7
3,246,858	+		BT2605	0.11	+0.5
3,246,864	+		BT2605	0.14	-2.6
3,246,937	-		BT2605	0.51	+1.6
3,247,050	-				-0.5
3,247,100	+				-0.5
3,247,107	-				+0.1
3,247,194	+		BT2606	0.11	-1.8
3,247,195	-		BT2606	0.11	-1.9
3,247,356	-		BT2606	0.27	-2.1
3,247,454	+		BT2606	0.37	-1.5
3,247,513	+		BT2606	0.42	-1.5
3,247,513	+		BT2606	0.42	-0.7
3,247,562	-		BT2606	0.47	-1.2
3,247,627	+		BT2606	0.54	-0.4
3,247,698	+		BT2606	0.61	-0.6