Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1816

Experiment: BHIS with Deoxycholic 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Deoxycholic 0.2 mg/ml
2,278,097	+		BT1815	0.13	-0.9
2,278,247	-		BT1815	0.27	+0.5
2,278,250	+		BT1815	0.28	+0.5
2,278,254	-		BT1815	0.28	-0.9
2,278,395	-		BT1815	0.42	-1.5
2,278,395	-		BT1815	0.42	-3.1
2,278,416	+		BT1815	0.44	+0.3
2,278,489	+		BT1815	0.51	-0.1
2,278,490	-		BT1815	0.51	-1.4
2,278,490	-		BT1815	0.51	+0.5
2,278,490	-		BT1815	0.51	+0.2
2,278,490	-		BT1815	0.51	+1.1
2,278,723	+		BT1815	0.74	-0.9
2,278,723	+		BT1815	0.74	-0.1
2,278,838	+		BT1815	0.86	+1.5
2,278,852	-		BT1815	0.87	+1.5
2,279,012	-				-3.2
2,279,037	-				-0.5
2,279,184	-		BT1816	0.40	+0.6
2,279,422	-				-0.9
2,279,665	+		BT1817	0.45	-1.9
2,279,682	-		BT1817	0.48	+0.1
2,279,733	+		BT1817	0.57	-2.1
2,279,861	+		BT1817	0.80	-2.4
2,279,870	-		BT1817	0.82	-1.1
2,279,870	-		BT1817	0.82	-0.9
2,279,911	-		BT1817	0.89	+0.5
2,279,942	-				-1.0
2,279,944	-				-0.6
2,279,944	-				-0.1
2,280,034	+				-1.1
2,280,055	+				+0.1
2,280,123	+				+0.0
2,280,292	+		BT1818	0.40	+0.3
2,280,356	+		BT1818	0.56	-0.2