Experiment: KB with Khayasin C 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4259 and Psyr_4260 are separated by 276 nucleotides Psyr_4260 and Psyr_4261 are separated by 62 nucleotides Psyr_4261 and Psyr_4262 are separated by 133 nucleotides Psyr_4262 and Psyr_4263 are separated by 74 nucleotides
Psyr_4259: Psyr_4259 - ATP-dependent protease, putative, at 5,075,180 to 5,077,615
_4259
Psyr_4260: Psyr_4260 - conserved hypothetical protein, at 5,077,892 to 5,078,380
_4260
Psyr_4261: Psyr_4261 - conserved hypothetical protein, at 5,078,443 to 5,080,296
_4261
Psyr_4262: Psyr_4262 - lipoprotein, putative, at 5,080,430 to 5,080,783
_4262
Psyr_4263: Psyr_4263 - transcription elongation factor GreB, at 5,080,858 to 5,081,355
_4263
Position (kb) 5078
5079
5080
5081 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5077.479 kb on - strand at 5077.589 kb on + strand at 5077.590 kb on - strand at 5077.590 kb on - strand at 5077.619 kb on + strand at 5077.619 kb on + strand at 5077.620 kb on - strand at 5077.626 kb on + strand at 5077.626 kb on + strand at 5077.626 kb on + strand at 5077.627 kb on - strand at 5077.627 kb on - strand at 5077.627 kb on - strand at 5077.627 kb on - strand at 5077.627 kb on - strand at 5077.627 kb on - strand at 5077.667 kb on + strand at 5077.756 kb on + strand at 5077.757 kb on - strand at 5077.757 kb on - strand at 5077.842 kb on + strand at 5077.842 kb on + strand at 5077.842 kb on + strand at 5077.875 kb on + strand at 5077.876 kb on - strand at 5077.891 kb on + strand at 5077.942 kb on + strand, within Psyr_4260 at 5077.942 kb on + strand, within Psyr_4260 at 5078.044 kb on + strand, within Psyr_4260 at 5078.045 kb on - strand, within Psyr_4260 at 5078.115 kb on - strand, within Psyr_4260 at 5078.115 kb on - strand, within Psyr_4260 at 5078.115 kb on - strand, within Psyr_4260 at 5078.115 kb on - strand, within Psyr_4260 at 5078.122 kb on + strand, within Psyr_4260 at 5078.204 kb on + strand, within Psyr_4260 at 5078.204 kb on + strand, within Psyr_4260 at 5078.204 kb on + strand, within Psyr_4260 at 5078.204 kb on + strand, within Psyr_4260 at 5078.204 kb on + strand, within Psyr_4260 at 5078.204 kb on + strand, within Psyr_4260 at 5078.204 kb on + strand, within Psyr_4260 at 5078.204 kb on + strand, within Psyr_4260 at 5078.205 kb on - strand, within Psyr_4260 at 5078.205 kb on - strand, within Psyr_4260 at 5078.205 kb on - strand, within Psyr_4260 at 5078.205 kb on - strand, within Psyr_4260 at 5078.205 kb on - strand, within Psyr_4260 at 5078.205 kb on - strand, within Psyr_4260 at 5078.363 kb on + strand at 5078.363 kb on + strand at 5078.363 kb on + strand at 5078.363 kb on + strand at 5078.363 kb on + strand at 5078.363 kb on + strand at 5078.363 kb on + strand at 5078.364 kb on - strand at 5078.364 kb on - strand at 5078.364 kb on - strand at 5078.364 kb on - strand at 5078.364 kb on - strand at 5078.364 kb on - strand at 5078.378 kb on + strand at 5078.379 kb on - strand at 5078.379 kb on - strand at 5078.431 kb on + strand at 5078.432 kb on - strand at 5078.442 kb on + strand at 5078.442 kb on + strand at 5078.443 kb on - strand at 5078.443 kb on - strand at 5078.443 kb on - strand at 5078.443 kb on - strand at 5078.443 kb on - strand at 5078.599 kb on + strand at 5078.599 kb on + strand at 5078.599 kb on + strand at 5078.600 kb on - strand at 5078.600 kb on - strand at 5078.600 kb on - strand at 5078.600 kb on - strand at 5078.683 kb on + strand, within Psyr_4261 at 5078.723 kb on + strand, within Psyr_4261 at 5078.723 kb on + strand, within Psyr_4261 at 5078.724 kb on - strand, within Psyr_4261 at 5078.724 kb on - strand, within Psyr_4261 at 5078.737 kb on - strand, within Psyr_4261 at 5078.810 kb on - strand, within Psyr_4261 at 5078.947 kb on + strand, within Psyr_4261 at 5078.948 kb on - strand, within Psyr_4261 at 5078.968 kb on + strand, within Psyr_4261 at 5078.968 kb on + strand, within Psyr_4261 at 5078.969 kb on - strand, within Psyr_4261 at 5078.969 kb on - strand, within Psyr_4261 at 5079.184 kb on + strand, within Psyr_4261 at 5079.184 kb on + strand, within Psyr_4261 at 5079.185 kb on - strand, within Psyr_4261 at 5079.185 kb on - strand, within Psyr_4261 at 5079.185 kb on - strand, within Psyr_4261 at 5079.335 kb on + strand, within Psyr_4261 at 5079.335 kb on + strand, within Psyr_4261 at 5079.335 kb on + strand, within Psyr_4261 at 5079.336 kb on - strand, within Psyr_4261 at 5079.336 kb on - strand, within Psyr_4261 at 5079.336 kb on - strand, within Psyr_4261 at 5079.336 kb on - strand, within Psyr_4261 at 5079.336 kb on - strand, within Psyr_4261 at 5079.336 kb on - strand, within Psyr_4261 at 5079.336 kb on - strand, within Psyr_4261 at 5079.336 kb on - strand, within Psyr_4261 at 5079.336 kb on - strand, within Psyr_4261 at 5079.336 kb on - strand, within Psyr_4261 at 5079.336 kb on - strand, within Psyr_4261 at 5079.411 kb on - strand, within Psyr_4261 at 5079.454 kb on + strand, within Psyr_4261 at 5079.654 kb on + strand, within Psyr_4261 at 5079.654 kb on + strand, within Psyr_4261 at 5079.654 kb on + strand, within Psyr_4261 at 5079.655 kb on - strand, within Psyr_4261 at 5079.655 kb on - strand, within Psyr_4261 at 5079.655 kb on - strand, within Psyr_4261 at 5079.655 kb on - strand, within Psyr_4261 at 5079.655 kb on - strand, within Psyr_4261 at 5079.703 kb on + strand, within Psyr_4261 at 5079.722 kb on - strand, within Psyr_4261 at 5079.722 kb on - strand, within Psyr_4261 at 5079.722 kb on - strand, within Psyr_4261 at 5079.746 kb on - strand, within Psyr_4261 at 5079.799 kb on + strand, within Psyr_4261 at 5079.799 kb on + strand, within Psyr_4261 at 5080.078 kb on - strand, within Psyr_4261 at 5080.078 kb on - strand, within Psyr_4261 at 5080.138 kb on + strand at 5080.139 kb on - strand at 5080.292 kb on - strand at 5080.363 kb on + strand at 5080.363 kb on + strand at 5080.363 kb on + strand at 5080.363 kb on + strand at 5080.364 kb on - strand at 5080.364 kb on - strand at 5080.364 kb on - strand at 5080.374 kb on + strand at 5080.380 kb on + strand at 5080.392 kb on + strand at 5080.392 kb on + strand at 5080.392 kb on + strand at 5080.392 kb on + strand at 5080.393 kb on - strand at 5080.399 kb on + strand at 5080.399 kb on + strand at 5080.399 kb on + strand at 5080.399 kb on + strand at 5080.399 kb on + strand at 5080.400 kb on - strand at 5080.400 kb on - strand at 5080.400 kb on - strand at 5080.400 kb on - strand at 5080.412 kb on + strand at 5080.413 kb on - strand at 5080.413 kb on - strand at 5080.413 kb on - strand at 5080.413 kb on - strand at 5080.613 kb on + strand, within Psyr_4262 at 5080.632 kb on - strand, within Psyr_4262 at 5080.840 kb on + strand at 5080.840 kb on + strand at 5080.840 kb on + strand at 5080.841 kb on - strand at 5080.841 kb on - strand at 5080.841 kb on - strand at 5080.841 kb on - strand at 5080.841 kb on - strand at 5080.843 kb on + strand at 5080.844 kb on - strand at 5080.942 kb on + strand, within Psyr_4263 at 5080.942 kb on + strand, within Psyr_4263 at 5080.942 kb on + strand, within Psyr_4263 at 5080.942 kb on + strand, within Psyr_4263 at 5080.942 kb on + strand, within Psyr_4263 at 5080.942 kb on + strand, within Psyr_4263 at 5080.942 kb on + strand, within Psyr_4263 at 5080.942 kb on + strand, within Psyr_4263 at 5080.942 kb on + strand, within Psyr_4263 at 5080.943 kb on - strand, within Psyr_4263 at 5080.943 kb on - strand, within Psyr_4263 at 5080.943 kb on - strand, within Psyr_4263 at 5080.943 kb on - strand, within Psyr_4263 at 5080.943 kb on - strand, within Psyr_4263 at 5080.943 kb on - strand, within Psyr_4263 at 5080.943 kb on - strand, within Psyr_4263 at 5080.943 kb on - strand, within Psyr_4263 at 5080.943 kb on - strand, within Psyr_4263 at 5081.007 kb on + strand, within Psyr_4263 at 5081.007 kb on + strand, within Psyr_4263 at 5081.007 kb on + strand, within Psyr_4263 at 5081.007 kb on + strand, within Psyr_4263 at 5081.008 kb on - strand, within Psyr_4263 at 5081.074 kb on + strand, within Psyr_4263 at 5081.074 kb on + strand, within Psyr_4263 at 5081.075 kb on - strand, within Psyr_4263
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Khayasin C 10 mM remove 5,077,479 - +0.6 5,077,589 + -1.0 5,077,590 - +0.4 5,077,590 - +0.6 5,077,619 + -1.2 5,077,619 + -0.5 5,077,620 - -0.2 5,077,626 + -0.3 5,077,626 + +0.7 5,077,626 + +0.1 5,077,627 - -0.6 5,077,627 - -0.4 5,077,627 - +1.4 5,077,627 - -0.4 5,077,627 - -0.5 5,077,627 - +0.5 5,077,667 + -0.2 5,077,756 + +0.6 5,077,757 - +1.1 5,077,757 - +0.0 5,077,842 + -0.0 5,077,842 + +1.0 5,077,842 + +1.0 5,077,875 + -0.1 5,077,876 - -0.3 5,077,891 + +0.1 5,077,942 + Psyr_4260 0.10 +0.6 5,077,942 + Psyr_4260 0.10 +1.0 5,078,044 + Psyr_4260 0.31 -0.3 5,078,045 - Psyr_4260 0.31 -1.0 5,078,115 - Psyr_4260 0.46 +1.2 5,078,115 - Psyr_4260 0.46 +0.4 5,078,115 - Psyr_4260 0.46 -0.9 5,078,115 - Psyr_4260 0.46 +0.8 5,078,122 + Psyr_4260 0.47 +0.1 5,078,204 + Psyr_4260 0.64 -1.8 5,078,204 + Psyr_4260 0.64 -1.0 5,078,204 + Psyr_4260 0.64 -0.6 5,078,204 + Psyr_4260 0.64 -0.3 5,078,204 + Psyr_4260 0.64 +0.5 5,078,204 + Psyr_4260 0.64 +0.4 5,078,204 + Psyr_4260 0.64 -0.0 5,078,204 + Psyr_4260 0.64 -0.8 5,078,205 - Psyr_4260 0.64 +0.5 5,078,205 - Psyr_4260 0.64 +0.0 5,078,205 - Psyr_4260 0.64 +1.0 5,078,205 - Psyr_4260 0.64 +0.7 5,078,205 - Psyr_4260 0.64 -2.1 5,078,205 - Psyr_4260 0.64 +1.0 5,078,363 + -0.2 5,078,363 + -0.4 5,078,363 + +1.4 5,078,363 + -0.2 5,078,363 + +0.4 5,078,363 + +0.2 5,078,363 + -0.6 5,078,364 - -1.2 5,078,364 - +0.5 5,078,364 - -0.1 5,078,364 - +0.5 5,078,364 - +0.4 5,078,364 - -0.7 5,078,378 + -0.9 5,078,379 - +0.6 5,078,379 - +0.9 5,078,431 + +0.6 5,078,432 - -0.2 5,078,442 + -0.4 5,078,442 + -0.3 5,078,443 - +1.7 5,078,443 - +0.2 5,078,443 - -0.1 5,078,443 - +1.2 5,078,443 - -0.2 5,078,599 + -0.3 5,078,599 + -1.1 5,078,599 + -1.0 5,078,600 - -0.0 5,078,600 - -0.9 5,078,600 - -1.1 5,078,600 - +0.1 5,078,683 + Psyr_4261 0.13 -0.3 5,078,723 + Psyr_4261 0.15 +0.4 5,078,723 + Psyr_4261 0.15 -0.7 5,078,724 - Psyr_4261 0.15 -1.8 5,078,724 - Psyr_4261 0.15 -1.3 5,078,737 - Psyr_4261 0.16 -0.3 5,078,810 - Psyr_4261 0.20 +2.4 5,078,947 + Psyr_4261 0.27 +0.1 5,078,948 - Psyr_4261 0.27 +1.0 5,078,968 + Psyr_4261 0.28 +0.5 5,078,968 + Psyr_4261 0.28 +0.5 5,078,969 - Psyr_4261 0.28 -0.2 5,078,969 - Psyr_4261 0.28 +0.1 5,079,184 + Psyr_4261 0.40 -0.4 5,079,184 + Psyr_4261 0.40 +0.4 5,079,185 - Psyr_4261 0.40 -0.8 5,079,185 - Psyr_4261 0.40 +0.0 5,079,185 - Psyr_4261 0.40 -0.8 5,079,335 + Psyr_4261 0.48 -0.2 5,079,335 + Psyr_4261 0.48 +1.6 5,079,335 + Psyr_4261 0.48 -0.1 5,079,336 - Psyr_4261 0.48 -1.1 5,079,336 - Psyr_4261 0.48 -1.3 5,079,336 - Psyr_4261 0.48 +0.6 5,079,336 - Psyr_4261 0.48 +0.1 5,079,336 - Psyr_4261 0.48 +0.4 5,079,336 - Psyr_4261 0.48 +0.0 5,079,336 - Psyr_4261 0.48 +0.1 5,079,336 - Psyr_4261 0.48 +2.0 5,079,336 - Psyr_4261 0.48 +1.0 5,079,336 - Psyr_4261 0.48 +0.4 5,079,336 - Psyr_4261 0.48 +0.0 5,079,411 - Psyr_4261 0.52 +1.4 5,079,454 + Psyr_4261 0.55 +0.2 5,079,654 + Psyr_4261 0.65 -0.0 5,079,654 + Psyr_4261 0.65 -1.0 5,079,654 + Psyr_4261 0.65 -0.2 5,079,655 - Psyr_4261 0.65 -1.0 5,079,655 - Psyr_4261 0.65 -0.6 5,079,655 - Psyr_4261 0.65 +2.0 5,079,655 - Psyr_4261 0.65 +0.8 5,079,655 - Psyr_4261 0.65 +2.4 5,079,703 + Psyr_4261 0.68 -0.5 5,079,722 - Psyr_4261 0.69 -0.4 5,079,722 - Psyr_4261 0.69 +1.6 5,079,722 - Psyr_4261 0.69 +0.6 5,079,746 - Psyr_4261 0.70 -1.3 5,079,799 + Psyr_4261 0.73 +0.4 5,079,799 + Psyr_4261 0.73 -1.7 5,080,078 - Psyr_4261 0.88 -0.6 5,080,078 - Psyr_4261 0.88 -0.0 5,080,138 + +0.5 5,080,139 - -1.1 5,080,292 - -0.6 5,080,363 + +1.5 5,080,363 + -0.6 5,080,363 + -0.3 5,080,363 + +0.4 5,080,364 - +0.0 5,080,364 - -1.1 5,080,364 - -0.1 5,080,374 + -0.0 5,080,380 + +0.6 5,080,392 + -0.7 5,080,392 + -1.2 5,080,392 + +0.6 5,080,392 + -0.0 5,080,393 - -1.8 5,080,399 + +0.2 5,080,399 + +0.8 5,080,399 + -0.0 5,080,399 + +0.7 5,080,399 + -0.0 5,080,400 - -1.0 5,080,400 - -1.5 5,080,400 - +0.0 5,080,400 - +0.2 5,080,412 + +0.6 5,080,413 - +0.0 5,080,413 - -0.0 5,080,413 - -0.7 5,080,413 - -0.1 5,080,613 + Psyr_4262 0.52 -0.6 5,080,632 - Psyr_4262 0.57 -0.8 5,080,840 + -0.6 5,080,840 + -0.1 5,080,840 + +1.1 5,080,841 - -0.4 5,080,841 - -0.1 5,080,841 - +0.5 5,080,841 - -1.1 5,080,841 - -0.8 5,080,843 + -0.1 5,080,844 - -0.2 5,080,942 + Psyr_4263 0.17 +0.5 5,080,942 + Psyr_4263 0.17 +2.0 5,080,942 + Psyr_4263 0.17 -0.8 5,080,942 + Psyr_4263 0.17 +0.9 5,080,942 + Psyr_4263 0.17 +0.9 5,080,942 + Psyr_4263 0.17 -2.9 5,080,942 + Psyr_4263 0.17 +0.9 5,080,942 + Psyr_4263 0.17 -0.6 5,080,942 + Psyr_4263 0.17 -0.1 5,080,943 - Psyr_4263 0.17 -1.7 5,080,943 - Psyr_4263 0.17 -0.2 5,080,943 - Psyr_4263 0.17 +0.9 5,080,943 - Psyr_4263 0.17 -0.5 5,080,943 - Psyr_4263 0.17 -1.0 5,080,943 - Psyr_4263 0.17 -0.6 5,080,943 - Psyr_4263 0.17 +0.4 5,080,943 - Psyr_4263 0.17 -0.2 5,080,943 - Psyr_4263 0.17 -0.1 5,081,007 + Psyr_4263 0.30 -0.2 5,081,007 + Psyr_4263 0.30 -0.7 5,081,007 + Psyr_4263 0.30 +0.4 5,081,007 + Psyr_4263 0.30 -2.0 5,081,008 - Psyr_4263 0.30 -0.6 5,081,074 + Psyr_4263 0.43 +0.8 5,081,074 + Psyr_4263 0.43 +2.4 5,081,075 - Psyr_4263 0.44 -0.4
Or see this region's nucleotide sequence