Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3981

Experiment: KB with Khayasin C 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Khayasin C 10 mM
4,733,253	+		Psyr_3979	0.81	+0.9
4,733,254	-		Psyr_3979	0.81	+0.9
4,733,267	+		Psyr_3979	0.82	-0.3
4,733,268	-		Psyr_3979	0.82	+0.3
4,733,323	+		Psyr_3979	0.83	-0.7
4,733,323	+		Psyr_3979	0.83	-0.0
4,733,323	+		Psyr_3979	0.83	-0.2
4,733,323	+		Psyr_3979	0.83	-0.2
4,733,324	-		Psyr_3979	0.83	-0.2
4,733,324	-		Psyr_3979	0.83	+0.5
4,733,324	-		Psyr_3979	0.83	+0.9
4,733,324	-		Psyr_3979	0.83	-1.2
4,733,324	-		Psyr_3979	0.83	+1.6
4,733,392	+		Psyr_3979	0.86	-0.3
4,733,392	+		Psyr_3979	0.86	+0.6
4,733,430	+		Psyr_3979	0.87	-0.5
4,733,560	+				-0.0
4,733,561	-				-0.6
4,733,561	-				+0.3
4,733,561	-				+1.8
4,733,561	-				-1.5
4,733,561	-				-1.5
4,733,599	+				+0.1
4,733,599	+				+0.1
4,733,599	+				+1.0
4,733,599	+				-0.7
4,733,599	+				+0.4
4,733,599	+				+0.7
4,733,600	-				+0.1
4,733,771	+				-0.4
4,733,771	+				-0.1
4,733,771	+				+0.3
4,733,830	+				-0.1
4,733,830	+				+0.4
4,733,830	+				-0.9
4,733,830	+				-0.3
4,733,830	+				+0.2
4,733,830	+				+0.2
4,733,831	-				+0.5
4,733,862	+				+0.4
4,733,863	-				+1.0
4,733,863	-				+0.5
4,733,863	-				+0.8
4,733,863	-				+0.6
4,733,863	-				+0.2
4,733,865	+				-0.1
4,733,865	+				-0.1
4,733,865	+				-0.2
4,733,906	+				+0.7
4,734,150	+				+0.5
4,734,150	+				+0.9
4,734,150	+				+0.9
4,734,151	-				+0.5
4,734,151	-				-1.0
4,734,151	-				+1.0
4,734,151	-				+0.4
4,734,151	-				-0.3
4,734,151	-				-1.7
4,734,273	+		Psyr_3981	0.12	-0.2
4,734,371	+		Psyr_3981	0.26	-0.5
4,734,372	-		Psyr_3981	0.27	+0.2
4,734,581	+		Psyr_3981	0.57	-1.3
4,734,582	-		Psyr_3981	0.57	+1.4
4,734,582	-		Psyr_3981	0.57	+0.6
4,734,582	-		Psyr_3981	0.57	+0.6
4,734,582	-		Psyr_3981	0.57	-0.3
4,734,584	+		Psyr_3981	0.57	-0.5
4,734,585	-		Psyr_3981	0.57	+0.2
4,734,585	-		Psyr_3981	0.57	+0.3
4,734,645	-		Psyr_3981	0.66	+0.2
4,734,691	-		Psyr_3981	0.73	+1.9
4,734,842	+				-0.3
4,734,843	-				+0.6
4,734,980	+				+0.3
4,734,981	-				+1.3
4,734,981	-				-0.5
4,734,981	-				+1.0
4,734,981	-				+0.9
4,734,981	-				-0.6
4,735,006	+				+1.3
4,735,006	+				+0.6
4,735,006	+				+0.9
4,735,006	+				-0.3
4,735,007	-				+1.0
4,735,007	-				-1.0
4,735,007	-				-1.0
4,735,007	-				+0.6
4,735,007	-				+1.0
4,735,007	-				+1.3
4,735,055	+				-1.2
4,735,056	-				-0.5
4,735,181	+		Psyr_3982	0.20	-1.1
4,735,194	-		Psyr_3982	0.21	-0.6
4,735,418	+		Psyr_3982	0.47	+1.3
4,735,419	-		Psyr_3982	0.47	+0.0
4,735,419	-		Psyr_3982	0.47	-0.1
4,735,461	-		Psyr_3982	0.51	-0.6
4,735,508	-		Psyr_3982	0.57	+0.6
4,735,537	+		Psyr_3982	0.60	+0.2
4,735,537	+		Psyr_3982	0.60	+1.8
4,735,537	+		Psyr_3982	0.60	-0.0
4,735,562	+		Psyr_3982	0.63	-0.9
4,735,562	+		Psyr_3982	0.63	-0.8
4,735,578	-		Psyr_3982	0.65	-0.4
4,735,616	+		Psyr_3982	0.69	-0.3
4,735,616	+		Psyr_3982	0.69	-0.4
4,735,616	+		Psyr_3982	0.69	+0.9
4,735,617	-		Psyr_3982	0.69	-0.7
4,735,617	-		Psyr_3982	0.69	+1.4
4,735,617	-		Psyr_3982	0.69	-0.0
4,735,617	-		Psyr_3982	0.69	+0.4
4,735,617	-		Psyr_3982	0.69	-0.0
4,735,617	-		Psyr_3982	0.69	+1.3
4,735,679	+		Psyr_3982	0.76	+1.0
4,735,679	+		Psyr_3982	0.76	-0.5
4,735,679	+		Psyr_3982	0.76	+0.9
4,735,679	+		Psyr_3982	0.76	+0.5
4,735,679	+		Psyr_3982	0.76	-0.7
4,735,680	-		Psyr_3982	0.76	+0.6
4,735,680	-		Psyr_3982	0.76	-0.6
4,735,680	-		Psyr_3982	0.76	-0.7
4,735,680	-		Psyr_3982	0.76	+0.2
4,735,680	-		Psyr_3982	0.76	+0.6
4,735,680	-		Psyr_3982	0.76	+0.3