Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2997

Experiment: KB with Khayasin C 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Khayasin C 10 mM
3,591,643	+		Psyr_2995	0.89	-0.8
3,591,729	-				-1.0
3,591,752	+				+0.6
3,591,752	+				+1.2
3,591,753	-				+0.5
3,591,887	+				+0.0
3,591,930	+				-1.3
3,591,939	+				-1.2
3,591,939	+				-0.7
3,591,939	+				-0.0
3,591,939	+				+1.1
3,591,939	+				+1.5
3,591,939	+				+0.5
3,591,939	+				+0.3
3,591,939	+				+0.1
3,591,940	-				-0.5
3,591,940	-				-1.4
3,591,940	-				-1.9
3,591,940	-				-0.5
3,591,943	+				+0.9
3,591,943	+				-1.2
3,591,943	+				+0.4
3,591,943	+				-0.9
3,591,944	-				-0.9
3,591,944	-				-0.7
3,591,944	-				-1.3
3,591,944	-				-0.6
3,591,944	-				+1.2
3,591,944	-				-1.0
3,591,946	+				-1.8
3,591,946	+				+1.5
3,591,947	-				+0.4
3,591,947	-				-1.9
3,591,947	-				-0.4
3,591,947	-				+0.5
3,592,142	-		Psyr_2996	0.45	+0.4
3,592,393	-				-0.0
3,592,393	-				-0.4
3,592,429	+				-0.5
3,592,539	-				+1.6
3,592,539	-				+0.4
3,592,553	+				-2.2
3,592,553	+				-1.7
3,592,554	-				-0.0
3,592,685	-				-0.2
3,592,761	+		Psyr_2997	0.11	-0.2
3,592,762	-		Psyr_2997	0.11	+0.5
3,592,800	+		Psyr_2997	0.13	+1.5
3,592,800	+		Psyr_2997	0.13	-0.9
3,592,801	-		Psyr_2997	0.13	-0.2
3,592,930	-		Psyr_2997	0.19	-0.1
3,593,019	+		Psyr_2997	0.23	-0.4
3,593,086	+		Psyr_2997	0.26	-0.4
3,593,265	+		Psyr_2997	0.34	+1.6
3,593,266	-		Psyr_2997	0.34	+0.6
3,593,275	-		Psyr_2997	0.35	-0.2
3,593,466	+		Psyr_2997	0.43	-0.4
3,593,499	+		Psyr_2997	0.45	-1.2
3,593,499	+		Psyr_2997	0.45	-0.8
3,593,499	+		Psyr_2997	0.45	+0.6
3,593,500	-		Psyr_2997	0.45	+1.2
3,593,500	-		Psyr_2997	0.45	-1.8
3,593,500	-		Psyr_2997	0.45	-0.5
3,593,500	-		Psyr_2997	0.45	-1.1
3,593,500	-		Psyr_2997	0.45	+2.5
3,593,500	-		Psyr_2997	0.45	-0.2
3,593,551	+		Psyr_2997	0.47	+1.4
3,593,973	+		Psyr_2997	0.66	+0.2
3,594,108	-		Psyr_2997	0.73	-1.4
3,594,342	+		Psyr_2997	0.83	+2.2
3,594,342	+		Psyr_2997	0.83	+0.6
3,594,343	-		Psyr_2997	0.83	+1.1
3,594,343	-		Psyr_2997	0.83	+0.5
3,594,343	-		Psyr_2997	0.83	+1.0
3,594,343	-		Psyr_2997	0.83	+0.2
3,594,576	+				-0.3
3,594,645	+				+1.0
3,594,645	+				+0.1
3,594,645	+				+0.0
3,594,645	+				+3.0
3,594,646	-				+0.4
3,594,646	-				+1.8
3,594,646	-				+0.0
3,594,778	-				-0.9
3,594,778	-				-1.0
3,594,778	-				+2.0
3,594,896	+		Psyr_2998	0.19	+0.2
3,594,897	-		Psyr_2998	0.19	+0.3
3,595,009	+		Psyr_2998	0.30	+1.2
3,595,263	-		Psyr_2998	0.55	+2.2
3,595,511	+		Psyr_2998	0.80	+0.9
3,595,512	-		Psyr_2998	0.80	+0.6
3,595,512	-		Psyr_2998	0.80	-0.8
3,595,512	-		Psyr_2998	0.80	+0.4
3,595,512	-		Psyr_2998	0.80	+0.2
3,595,512	-		Psyr_2998	0.80	+1.1
3,595,575	-		Psyr_2998	0.86	+0.3