Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2542

Experiment: KB with Khayasin C 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Khayasin C 10 mM
2,956,785	+		Psyr_2541	0.43	+0.9
2,956,785	+		Psyr_2541	0.43	-0.7
2,956,785	+		Psyr_2541	0.43	-0.3
2,956,786	-		Psyr_2541	0.44	+0.1
2,956,786	-		Psyr_2541	0.44	-0.6
2,956,802	-		Psyr_2541	0.45	-0.2
2,957,010	+		Psyr_2541	0.66	-0.4
2,957,010	+		Psyr_2541	0.66	+1.4
2,957,011	-		Psyr_2541	0.66	+0.1
2,957,073	+		Psyr_2541	0.72	-1.3
2,957,073	+		Psyr_2541	0.72	+0.8
2,957,074	-		Psyr_2541	0.72	+0.2
2,957,074	-		Psyr_2541	0.72	+0.1
2,957,074	-		Psyr_2541	0.72	-0.1
2,957,137	-		Psyr_2541	0.78	+0.3
2,957,394	+				+0.6
2,957,395	-				-0.5
2,957,535	+				+1.8
2,957,535	+				-1.3
2,957,535	+				-1.5
2,957,536	-				+0.0
2,957,536	-				+0.8
2,957,763	+		Psyr_2542	0.23	+0.2
2,957,764	-		Psyr_2542	0.23	+0.9
2,957,874	+		Psyr_2542	0.30	-1.9
2,957,874	+		Psyr_2542	0.30	+0.1
2,957,874	+		Psyr_2542	0.30	+0.8
2,957,875	-		Psyr_2542	0.30	+3.2
2,957,875	-		Psyr_2542	0.30	+0.9
2,957,875	-		Psyr_2542	0.30	+1.1
2,957,875	-		Psyr_2542	0.30	-0.1
2,957,919	+		Psyr_2542	0.33	-0.5
2,958,286	+		Psyr_2542	0.56	+0.8
2,958,287	-		Psyr_2542	0.56	-0.3
2,958,287	-		Psyr_2542	0.56	+0.4
2,958,287	-		Psyr_2542	0.56	+2.6
2,958,590	-		Psyr_2542	0.75	-0.0
2,958,606	+		Psyr_2542	0.76	+0.9
2,958,607	-		Psyr_2542	0.77	+0.3
2,958,681	+		Psyr_2542	0.81	-1.8
2,958,682	-		Psyr_2542	0.81	-2.8
2,958,695	+		Psyr_2542	0.82	+0.7
2,959,023	+				-0.2
2,959,240	-		Psyr_2543	0.37	+0.5
2,959,285	-		Psyr_2543	0.46	+1.1
2,959,395	-		Psyr_2543	0.66	-0.1
2,959,549	+				+1.1
2,959,716	-		Psyr_2544	0.25	+0.1
2,959,719	-		Psyr_2544	0.25	-0.3
2,959,785	-		Psyr_2544	0.36	-0.4
2,959,828	+		Psyr_2544	0.44	+1.9
2,959,828	+		Psyr_2544	0.44	-0.9
2,959,828	+		Psyr_2544	0.44	-0.3
2,959,859	+		Psyr_2544	0.49	-1.4