Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2305

Experiment: KB with Khayasin C 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Khayasin C 10 mM
2,679,510	+		Psyr_2304	0.65	-0.5
2,679,538	+		Psyr_2304	0.67	+0.1
2,679,538	+		Psyr_2304	0.67	-3.2
2,679,538	+		Psyr_2304	0.67	+0.0
2,679,538	+		Psyr_2304	0.67	+1.4
2,679,538	+		Psyr_2304	0.67	-1.4
2,679,539	-		Psyr_2304	0.67	+0.3
2,679,539	-		Psyr_2304	0.67	-0.9
2,679,539	-		Psyr_2304	0.67	+0.2
2,679,539	-		Psyr_2304	0.67	-0.1
2,679,539	-		Psyr_2304	0.67	-0.7
2,679,835	+		Psyr_2304	0.88	+0.1
2,679,835	+				+1.9
2,679,835	+		Psyr_2304	0.88	+0.5
2,679,836	-		Psyr_2304	0.88	+0.7
2,679,836	-		Psyr_2304	0.88	-0.8
2,679,836	-		Psyr_2304	0.88	-0.3
2,679,856	+		Psyr_2304	0.90	+0.3
2,679,856	+		Psyr_2304	0.90	+0.4
2,679,857	-		Psyr_2304	0.90	+0.3
2,679,946	+				+2.6
2,679,946	+				+0.8
2,679,946	+				+0.1
2,679,946	+				+0.6
2,679,946	+				+0.2
2,679,946	+				-1.3
2,679,946	+				+0.7
2,679,946	+				-1.9
2,679,946	+				-0.7
2,679,946	+				+1.8
2,679,946	+				+0.1
2,679,947	-				+0.3
2,679,947	-				-2.8
2,679,947	-				-0.3
2,679,947	-				+1.9
2,680,209	-				+0.0
2,680,245	+				-1.4
2,680,245	+				+0.7
2,680,245	+				+0.5
2,680,245	+				-1.3
2,680,246	-				+0.7
2,680,246	-				-0.3
2,680,282	-				-0.1
2,680,282	-				+0.6
2,680,285	+				-0.7
2,680,285	+				-1.0
2,680,286	-				-2.9
2,680,286	-				-0.7
2,680,286	-				-1.0
2,680,286	-				+1.6
2,680,286	-				+0.2
2,680,286	-				-1.7
2,680,311	+				-1.0
2,680,312	-				+0.6
2,680,325	+				+0.7
2,680,448	+		Psyr_2305	0.11	-1.2
2,680,448	+		Psyr_2305	0.11	-0.7
2,680,822	+		Psyr_2305	0.39	+1.9
2,680,823	-		Psyr_2305	0.39	-0.5
2,680,823	-		Psyr_2305	0.39	-2.9
2,680,950	+		Psyr_2305	0.49	-0.6
2,680,950	+		Psyr_2305	0.49	-0.5
2,680,950	+		Psyr_2305	0.49	-2.2
2,680,950	+		Psyr_2305	0.49	+0.0
2,680,951	-		Psyr_2305	0.49	+1.3
2,680,992	-		Psyr_2305	0.52	-1.1
2,680,998	+		Psyr_2305	0.53	+0.2
2,680,998	+		Psyr_2305	0.53	-0.3
2,681,603	-				-0.0
2,681,603	-				+0.6
2,681,603	-				+0.1
2,681,911	+		Psyr_2306	0.15	+0.2
2,681,912	-		Psyr_2306	0.16	-0.6
2,681,912	-		Psyr_2306	0.16	-0.7
2,681,912	-		Psyr_2306	0.16	-0.0
2,681,912	-		Psyr_2306	0.16	-0.2
2,681,912	-		Psyr_2306	0.16	-0.2
2,681,913	+		Psyr_2306	0.16	-0.5
2,682,004	+		Psyr_2306	0.22	+0.2
2,682,004	+		Psyr_2306	0.22	+0.6
2,682,004	+		Psyr_2306	0.22	+0.2
2,682,004	+		Psyr_2306	0.22	-0.2
2,682,004	+		Psyr_2306	0.22	-1.0
2,682,005	-		Psyr_2306	0.22	-1.2
2,682,005	-		Psyr_2306	0.22	+0.5
2,682,005	-		Psyr_2306	0.22	-0.4
2,682,005	-		Psyr_2306	0.22	-0.2
2,682,042	+		Psyr_2306	0.25	-0.1
2,682,042	+		Psyr_2306	0.25	-0.2
2,682,043	-		Psyr_2306	0.25	-0.2
2,682,043	-		Psyr_2306	0.25	-1.3
2,682,043	-		Psyr_2306	0.25	-1.7
2,682,043	-		Psyr_2306	0.25	-0.0
2,682,097	+		Psyr_2306	0.28	-1.0
2,682,165	+		Psyr_2306	0.33	-0.2
2,682,166	-		Psyr_2306	0.33	-1.3
2,682,348	-		Psyr_2306	0.46	+1.3
2,682,389	+		Psyr_2306	0.48	+1.0
2,682,389	+		Psyr_2306	0.48	+0.3
2,682,419	+		Psyr_2306	0.50	-0.4
2,682,420	-		Psyr_2306	0.51	+1.2
2,682,420	-		Psyr_2306	0.51	+0.9
2,682,563	-		Psyr_2306	0.60	+0.2
2,682,584	-		Psyr_2306	0.62	-0.0
2,682,584	-		Psyr_2306	0.62	-0.9
2,682,584	-		Psyr_2306	0.62	-0.2
2,682,607	+		Psyr_2306	0.63	-0.3
2,682,607	+		Psyr_2306	0.63	-1.9
2,682,607	+		Psyr_2306	0.63	+0.9
2,682,607	+		Psyr_2306	0.63	+0.6
2,682,607	+		Psyr_2306	0.63	-1.3
2,682,607	+		Psyr_2306	0.63	+0.9
2,682,607	+		Psyr_2306	0.63	+0.9
2,682,607	+		Psyr_2306	0.63	+0.3
2,682,607	+		Psyr_2306	0.63	-1.2
2,682,607	+		Psyr_2306	0.63	+0.8
2,682,608	-		Psyr_2306	0.63	+0.8
2,682,608	-		Psyr_2306	0.63	+0.2
2,682,608	-		Psyr_2306	0.63	+0.5
2,682,608	-		Psyr_2306	0.63	-1.3
2,682,608	-		Psyr_2306	0.63	+0.6
2,682,608	-		Psyr_2306	0.63	+2.9
2,682,608	-		Psyr_2306	0.63	-2.0