Experiment: KB with Khayasin C 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_1375 and Psyr_1376 are separated by 259 nucleotides Psyr_1376 and Psyr_1377 are separated by 396 nucleotides
Psyr_1375: Psyr_1375 - 4Fe-4S ferredoxin, iron-sulfur binding protein, at 1,558,249 to 1,558,572
_1375
Psyr_1376: Psyr_1376 - DNA mismatch repair protein MutS, at 1,558,832 to 1,561,411
_1376
Psyr_1377: Psyr_1377 - CinA, C-terminal, at 1,561,808 to 1,562,386
_1377
Position (kb) 1558
1559
1560
1561
1562 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 1557.836 kb on + strand at 1557.836 kb on + strand at 1557.836 kb on + strand at 1557.836 kb on + strand at 1557.836 kb on + strand at 1557.836 kb on + strand at 1557.836 kb on + strand at 1557.836 kb on + strand at 1557.836 kb on + strand at 1557.836 kb on + strand at 1557.837 kb on - strand at 1557.837 kb on - strand at 1557.837 kb on - strand at 1557.837 kb on - strand at 1557.837 kb on - strand at 1557.837 kb on - strand at 1557.852 kb on + strand at 1557.852 kb on + strand at 1557.853 kb on - strand at 1557.853 kb on - strand at 1557.853 kb on - strand at 1557.868 kb on + strand at 1557.869 kb on - strand at 1557.880 kb on + strand at 1557.891 kb on + strand at 1557.892 kb on - strand at 1557.892 kb on - strand at 1558.250 kb on + strand at 1558.250 kb on + strand at 1558.251 kb on - strand at 1558.251 kb on - strand at 1558.251 kb on - strand at 1558.689 kb on - strand at 1558.720 kb on - strand at 1558.811 kb on - strand at 1558.811 kb on - strand at 1558.811 kb on - strand at 1558.811 kb on - strand at 1558.817 kb on - strand at 1558.817 kb on - strand at 1558.817 kb on - strand at 1558.817 kb on - strand at 1558.817 kb on - strand at 1558.817 kb on - strand at 1558.817 kb on - strand at 1558.817 kb on - strand at 1558.817 kb on - strand at 1558.817 kb on - strand at 1558.817 kb on - strand at 1558.817 kb on - strand at 1558.817 kb on - strand at 1558.817 kb on - strand at 1558.817 kb on - strand at 1558.821 kb on - strand at 1558.821 kb on - strand at 1558.821 kb on - strand at 1558.821 kb on - strand at 1558.821 kb on - strand at 1558.821 kb on - strand at 1558.821 kb on - strand at 1558.854 kb on + strand at 1558.854 kb on + strand at 1558.854 kb on + strand at 1558.855 kb on - strand at 1558.855 kb on - strand at 1558.855 kb on - strand at 1558.855 kb on - strand at 1558.855 kb on - strand at 1558.855 kb on - strand at 1558.855 kb on - strand at 1558.855 kb on - strand at 1558.856 kb on + strand at 1558.856 kb on + strand at 1558.856 kb on + strand at 1558.945 kb on + strand at 1558.945 kb on + strand at 1558.945 kb on + strand at 1558.946 kb on - strand at 1558.946 kb on - strand at 1559.094 kb on + strand, within Psyr_1376 at 1559.094 kb on + strand, within Psyr_1376 at 1559.220 kb on + strand, within Psyr_1376 at 1559.221 kb on - strand, within Psyr_1376 at 1559.221 kb on - strand, within Psyr_1376 at 1559.221 kb on - strand, within Psyr_1376 at 1559.511 kb on - strand, within Psyr_1376 at 1559.533 kb on + strand, within Psyr_1376 at 1559.534 kb on - strand, within Psyr_1376 at 1559.535 kb on + strand, within Psyr_1376 at 1559.535 kb on + strand, within Psyr_1376 at 1559.535 kb on + strand, within Psyr_1376 at 1559.535 kb on + strand, within Psyr_1376 at 1559.535 kb on + strand, within Psyr_1376 at 1559.535 kb on + strand, within Psyr_1376 at 1559.535 kb on + strand, within Psyr_1376 at 1559.535 kb on + strand, within Psyr_1376 at 1559.535 kb on + strand, within Psyr_1376 at 1559.535 kb on + strand, within Psyr_1376 at 1559.535 kb on + strand, within Psyr_1376 at 1559.535 kb on + strand, within Psyr_1376 at 1559.535 kb on + strand, within Psyr_1376 at 1559.536 kb on - strand, within Psyr_1376 at 1559.536 kb on - strand, within Psyr_1376 at 1559.536 kb on - strand, within Psyr_1376 at 1559.536 kb on - strand, within Psyr_1376 at 1559.536 kb on - strand, within Psyr_1376 at 1559.536 kb on - strand, within Psyr_1376 at 1559.536 kb on - strand, within Psyr_1376 at 1559.536 kb on - strand, within Psyr_1376 at 1559.536 kb on - strand, within Psyr_1376 at 1559.536 kb on - strand, within Psyr_1376 at 1559.536 kb on - strand, within Psyr_1376 at 1559.536 kb on - strand, within Psyr_1376 at 1559.536 kb on - strand, within Psyr_1376 at 1559.536 kb on - strand, within Psyr_1376 at 1559.536 kb on - strand, within Psyr_1376 at 1559.536 kb on - strand, within Psyr_1376 at 1559.536 kb on - strand, within Psyr_1376 at 1559.536 kb on - strand, within Psyr_1376 at 1559.536 kb on - strand, within Psyr_1376 at 1559.536 kb on - strand, within Psyr_1376 at 1559.536 kb on - strand, within Psyr_1376 at 1559.536 kb on - strand, within Psyr_1376 at 1559.627 kb on + strand, within Psyr_1376 at 1559.627 kb on + strand, within Psyr_1376 at 1559.627 kb on + strand, within Psyr_1376 at 1559.628 kb on - strand, within Psyr_1376 at 1559.770 kb on + strand, within Psyr_1376 at 1559.900 kb on - strand, within Psyr_1376 at 1559.933 kb on + strand, within Psyr_1376 at 1559.933 kb on + strand, within Psyr_1376 at 1559.933 kb on + strand, within Psyr_1376 at 1559.933 kb on + strand, within Psyr_1376 at 1559.933 kb on + strand, within Psyr_1376 at 1559.934 kb on - strand, within Psyr_1376 at 1559.937 kb on + strand, within Psyr_1376 at 1559.937 kb on + strand, within Psyr_1376 at 1559.937 kb on + strand, within Psyr_1376 at 1559.937 kb on + strand, within Psyr_1376 at 1559.937 kb on + strand, within Psyr_1376 at 1559.937 kb on + strand, within Psyr_1376 at 1559.937 kb on + strand, within Psyr_1376 at 1559.937 kb on + strand, within Psyr_1376 at 1559.937 kb on + strand, within Psyr_1376 at 1559.937 kb on + strand, within Psyr_1376 at 1559.938 kb on - strand, within Psyr_1376 at 1559.938 kb on - strand, within Psyr_1376 at 1559.938 kb on - strand, within Psyr_1376 at 1559.938 kb on - strand, within Psyr_1376 at 1559.938 kb on - strand, within Psyr_1376 at 1559.938 kb on - strand, within Psyr_1376 at 1559.938 kb on - strand, within Psyr_1376 at 1559.938 kb on - strand, within Psyr_1376 at 1559.938 kb on - strand, within Psyr_1376 at 1559.985 kb on + strand, within Psyr_1376 at 1559.986 kb on - strand, within Psyr_1376 at 1560.117 kb on + strand, within Psyr_1376 at 1560.205 kb on - strand, within Psyr_1376 at 1560.205 kb on - strand, within Psyr_1376 at 1560.644 kb on + strand, within Psyr_1376 at 1560.645 kb on - strand, within Psyr_1376 at 1560.662 kb on - strand, within Psyr_1376 at 1560.682 kb on - strand, within Psyr_1376 at 1561.173 kb on + strand at 1561.173 kb on + strand at 1561.250 kb on + strand at 1561.250 kb on + strand at 1561.250 kb on + strand at 1561.250 kb on + strand at 1561.250 kb on + strand at 1561.250 kb on + strand at 1561.288 kb on - strand at 1561.288 kb on - strand at 1561.500 kb on + strand at 1561.521 kb on + strand at 1561.547 kb on + strand at 1561.614 kb on + strand at 1561.614 kb on + strand at 1561.614 kb on + strand at 1561.615 kb on - strand at 1561.615 kb on - strand at 1561.654 kb on + strand at 1561.657 kb on - strand at 1561.670 kb on + strand at 1561.670 kb on + strand at 1561.671 kb on - strand at 1561.671 kb on - strand at 1561.672 kb on + strand at 1561.799 kb on + strand at 1561.799 kb on + strand at 1561.799 kb on + strand at 1561.799 kb on + strand at 1561.799 kb on + strand at 1561.799 kb on + strand at 1561.799 kb on + strand at 1561.800 kb on - strand at 1561.800 kb on - strand at 1561.800 kb on - strand at 1561.800 kb on - strand at 1561.800 kb on - strand at 1561.800 kb on - strand at 1561.800 kb on - strand at 1561.800 kb on - strand at 1561.800 kb on - strand at 1561.800 kb on - strand at 1561.857 kb on - strand at 1561.881 kb on - strand, within Psyr_1377 at 1561.881 kb on - strand, within Psyr_1377 at 1561.881 kb on - strand, within Psyr_1377 at 1562.036 kb on + strand, within Psyr_1377 at 1562.037 kb on - strand, within Psyr_1377 at 1562.073 kb on + strand, within Psyr_1377 at 1562.074 kb on - strand, within Psyr_1377 at 1562.088 kb on + strand, within Psyr_1377 at 1562.089 kb on - strand, within Psyr_1377 at 1562.089 kb on - strand, within Psyr_1377 at 1562.349 kb on + strand at 1562.350 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Khayasin C 10 mM remove 1,557,836 + +0.2 1,557,836 + +0.3 1,557,836 + -0.9 1,557,836 + -0.2 1,557,836 + -0.1 1,557,836 + +0.0 1,557,836 + +0.8 1,557,836 + +1.4 1,557,836 + +0.1 1,557,836 + +0.8 1,557,837 - +1.4 1,557,837 - -0.7 1,557,837 - -0.8 1,557,837 - +0.4 1,557,837 - -0.9 1,557,837 - -0.4 1,557,852 + +1.1 1,557,852 + -0.1 1,557,853 - -0.3 1,557,853 - +0.0 1,557,853 - -0.0 1,557,868 + -0.8 1,557,869 - +0.2 1,557,880 + -0.9 1,557,891 + +0.1 1,557,892 - +0.1 1,557,892 - -0.7 1,558,250 + +0.5 1,558,250 + -1.3 1,558,251 - -0.3 1,558,251 - +2.1 1,558,251 - +1.1 1,558,689 - +1.0 1,558,720 - -0.3 1,558,811 - +1.4 1,558,811 - -1.0 1,558,811 - +1.0 1,558,811 - -0.5 1,558,817 - -0.7 1,558,817 - +0.2 1,558,817 - -0.6 1,558,817 - -0.8 1,558,817 - -1.1 1,558,817 - -0.3 1,558,817 - +0.2 1,558,817 - +1.4 1,558,817 - +1.7 1,558,817 - -0.3 1,558,817 - -0.0 1,558,817 - +0.7 1,558,817 - +0.5 1,558,817 - +0.5 1,558,817 - +2.4 1,558,821 - -0.9 1,558,821 - +0.2 1,558,821 - -0.3 1,558,821 - -0.4 1,558,821 - +0.0 1,558,821 - +0.2 1,558,821 - -0.3 1,558,854 + +0.4 1,558,854 + -0.0 1,558,854 + +0.5 1,558,855 - +0.3 1,558,855 - +1.5 1,558,855 - +1.8 1,558,855 - -0.1 1,558,855 - +0.8 1,558,855 - +0.0 1,558,855 - +0.2 1,558,855 - +0.7 1,558,856 + -0.9 1,558,856 + -0.7 1,558,856 + -0.7 1,558,945 + +0.3 1,558,945 + -0.2 1,558,945 + +1.1 1,558,946 - -0.9 1,558,946 - +2.0 1,559,094 + Psyr_1376 0.10 +2.0 1,559,094 + Psyr_1376 0.10 -0.8 1,559,220 + Psyr_1376 0.15 -0.9 1,559,221 - Psyr_1376 0.15 +0.7 1,559,221 - Psyr_1376 0.15 +1.2 1,559,221 - Psyr_1376 0.15 -1.2 1,559,511 - Psyr_1376 0.26 +1.1 1,559,533 + Psyr_1376 0.27 -0.0 1,559,534 - Psyr_1376 0.27 -1.2 1,559,535 + Psyr_1376 0.27 +0.2 1,559,535 + Psyr_1376 0.27 +0.6 1,559,535 + Psyr_1376 0.27 +0.8 1,559,535 + Psyr_1376 0.27 +0.9 1,559,535 + Psyr_1376 0.27 -0.2 1,559,535 + Psyr_1376 0.27 +0.3 1,559,535 + Psyr_1376 0.27 +0.2 1,559,535 + Psyr_1376 0.27 -0.2 1,559,535 + Psyr_1376 0.27 +1.4 1,559,535 + Psyr_1376 0.27 +0.6 1,559,535 + Psyr_1376 0.27 +1.2 1,559,535 + Psyr_1376 0.27 +0.6 1,559,535 + Psyr_1376 0.27 +0.7 1,559,536 - Psyr_1376 0.27 +0.1 1,559,536 - Psyr_1376 0.27 +0.4 1,559,536 - Psyr_1376 0.27 +0.8 1,559,536 - Psyr_1376 0.27 -0.5 1,559,536 - Psyr_1376 0.27 -0.2 1,559,536 - Psyr_1376 0.27 +0.7 1,559,536 - Psyr_1376 0.27 -0.2 1,559,536 - Psyr_1376 0.27 +1.2 1,559,536 - Psyr_1376 0.27 -1.0 1,559,536 - Psyr_1376 0.27 -0.3 1,559,536 - Psyr_1376 0.27 +0.6 1,559,536 - Psyr_1376 0.27 +0.5 1,559,536 - Psyr_1376 0.27 +0.1 1,559,536 - Psyr_1376 0.27 -0.6 1,559,536 - Psyr_1376 0.27 -0.6 1,559,536 - Psyr_1376 0.27 +0.2 1,559,536 - Psyr_1376 0.27 +0.5 1,559,536 - Psyr_1376 0.27 +0.1 1,559,536 - Psyr_1376 0.27 +1.1 1,559,536 - Psyr_1376 0.27 +0.3 1,559,536 - Psyr_1376 0.27 -0.8 1,559,536 - Psyr_1376 0.27 +1.1 1,559,627 + Psyr_1376 0.31 +0.8 1,559,627 + Psyr_1376 0.31 -0.5 1,559,627 + Psyr_1376 0.31 -0.3 1,559,628 - Psyr_1376 0.31 +0.2 1,559,770 + Psyr_1376 0.36 +0.2 1,559,900 - Psyr_1376 0.41 +1.1 1,559,933 + Psyr_1376 0.43 +1.2 1,559,933 + Psyr_1376 0.43 +0.2 1,559,933 + Psyr_1376 0.43 -1.2 1,559,933 + Psyr_1376 0.43 +0.6 1,559,933 + Psyr_1376 0.43 +1.2 1,559,934 - Psyr_1376 0.43 -0.6 1,559,937 + Psyr_1376 0.43 +0.5 1,559,937 + Psyr_1376 0.43 +0.0 1,559,937 + Psyr_1376 0.43 +0.2 1,559,937 + Psyr_1376 0.43 +0.4 1,559,937 + Psyr_1376 0.43 +0.5 1,559,937 + Psyr_1376 0.43 +0.0 1,559,937 + Psyr_1376 0.43 -0.3 1,559,937 + Psyr_1376 0.43 -0.7 1,559,937 + Psyr_1376 0.43 +0.5 1,559,937 + Psyr_1376 0.43 -0.5 1,559,938 - Psyr_1376 0.43 -1.4 1,559,938 - Psyr_1376 0.43 +2.4 1,559,938 - Psyr_1376 0.43 +0.3 1,559,938 - Psyr_1376 0.43 +0.8 1,559,938 - Psyr_1376 0.43 +0.6 1,559,938 - Psyr_1376 0.43 -0.5 1,559,938 - Psyr_1376 0.43 -0.1 1,559,938 - Psyr_1376 0.43 +0.2 1,559,938 - Psyr_1376 0.43 -0.4 1,559,985 + Psyr_1376 0.45 +1.0 1,559,986 - Psyr_1376 0.45 -1.9 1,560,117 + Psyr_1376 0.50 -0.8 1,560,205 - Psyr_1376 0.53 -0.2 1,560,205 - Psyr_1376 0.53 -1.2 1,560,644 + Psyr_1376 0.70 +1.4 1,560,645 - Psyr_1376 0.70 +0.4 1,560,662 - Psyr_1376 0.71 +0.4 1,560,682 - Psyr_1376 0.72 +1.1 1,561,173 + +0.1 1,561,173 + +0.1 1,561,250 + +0.1 1,561,250 + -0.7 1,561,250 + -1.6 1,561,250 + +0.6 1,561,250 + -0.4 1,561,250 + +0.7 1,561,288 - -0.0 1,561,288 - +0.0 1,561,500 + +0.8 1,561,521 + +0.4 1,561,547 + +1.0 1,561,614 + +0.2 1,561,614 + -0.5 1,561,614 + -0.4 1,561,615 - -1.1 1,561,615 - +1.2 1,561,654 + +0.2 1,561,657 - -1.1 1,561,670 + +0.3 1,561,670 + -0.9 1,561,671 - +1.4 1,561,671 - -0.3 1,561,672 + -0.2 1,561,799 + -0.8 1,561,799 + -0.1 1,561,799 + -0.6 1,561,799 + +1.4 1,561,799 + +0.7 1,561,799 + -1.1 1,561,799 + +0.6 1,561,800 - -0.6 1,561,800 - +0.5 1,561,800 - -1.9 1,561,800 - +1.9 1,561,800 - -1.2 1,561,800 - -1.9 1,561,800 - -3.2 1,561,800 - -1.6 1,561,800 - -0.4 1,561,800 - -2.1 1,561,857 - +0.4 1,561,881 - Psyr_1377 0.13 -1.7 1,561,881 - Psyr_1377 0.13 -1.9 1,561,881 - Psyr_1377 0.13 +0.3 1,562,036 + Psyr_1377 0.39 +2.0 1,562,037 - Psyr_1377 0.40 +0.3 1,562,073 + Psyr_1377 0.46 +1.7 1,562,074 - Psyr_1377 0.46 +1.7 1,562,088 + Psyr_1377 0.48 -0.4 1,562,089 - Psyr_1377 0.49 +1.1 1,562,089 - Psyr_1377 0.49 +1.1 1,562,349 + +0.3 1,562,350 - -0.1
Or see this region's nucleotide sequence