Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1274

Experiment: KB with Khayasin C 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Khayasin C 10 mM
1,438,749	-		Psyr_1272	0.82	-0.8
1,438,778	+		Psyr_1272	0.87	+0.2
1,438,778	+		Psyr_1272	0.87	+1.9
1,439,012	+				-1.5
1,439,012	+				+0.0
1,439,012	+				-0.2
1,439,012	+				+0.5
1,439,012	+				+0.5
1,439,012	+				-1.0
1,439,012	+				-1.5
1,439,012	+				+0.1
1,439,013	-				-0.2
1,439,013	-				-1.6
1,439,013	-				+0.6
1,439,013	-				-0.1
1,439,013	-				-1.0
1,439,013	-				+0.5
1,439,025	-				+0.0
1,439,323	+		Psyr_1273	0.54	+0.2
1,439,323	+		Psyr_1273	0.54	+0.8
1,439,323	+		Psyr_1273	0.54	-1.1
1,439,323	+		Psyr_1273	0.54	-0.2
1,439,324	-		Psyr_1273	0.54	+0.1
1,439,464	+		Psyr_1273	0.78	-0.2
1,439,464	+		Psyr_1273	0.78	-0.2
1,439,465	-		Psyr_1273	0.78	-0.0
1,439,477	-		Psyr_1273	0.80	+0.1
1,439,492	-		Psyr_1273	0.83	+0.3
1,439,492	-		Psyr_1273	0.83	-0.2
1,439,531	+		Psyr_1273	0.89	+0.4
1,439,545	+				+0.3
1,439,546	-				-0.4
1,439,546	-				-0.4
1,439,625	+				-1.5
1,439,625	+				-0.2
1,439,625	+				-0.6
1,439,625	+				+1.0
1,439,626	-				+0.4
1,439,626	-				+0.6
1,439,626	-				+0.2
1,439,626	-				-0.4
1,439,626	-				+0.2
1,439,626	-				+0.3
1,439,626	-				+1.8
1,439,626	-				+0.5
1,439,626	-				-1.5
1,439,626	-				+0.8
1,439,626	-				-0.5
1,439,626	-				-0.3
1,439,626	-				+0.0
1,439,626	-				+0.3
1,439,626	-				+1.3
1,439,643	-				+0.5
1,439,942	-		Psyr_1274	0.53	+0.7
1,439,995	+		Psyr_1274	0.63	+1.8
1,439,996	-		Psyr_1274	0.63	+0.0
1,439,996	-		Psyr_1274	0.63	-1.2
1,439,996	-		Psyr_1274	0.63	+1.5
1,439,996	-		Psyr_1274	0.63	-0.6
1,440,137	-				-0.8
1,440,137	-				-1.0
1,440,137	-				+0.8
1,440,140	+				+1.0
1,440,140	+				+0.3
1,440,140	+				+0.5
1,440,141	-				-0.9
1,440,141	-				+0.8
1,440,141	-				-0.1
1,440,141	-				+0.2
1,440,141	-				-0.3
1,440,141	-				-0.6
1,440,141	-				-0.1
1,440,141	-				+0.3
1,440,141	-				+0.5
1,440,239	+		Psyr_1275	0.23	+0.5
1,440,239	+		Psyr_1275	0.23	+0.8
1,440,239	+		Psyr_1275	0.23	+0.6
1,440,240	-		Psyr_1275	0.23	-0.7
1,440,240	-		Psyr_1275	0.23	+0.8
1,440,240	-		Psyr_1275	0.23	-0.2
1,440,240	-		Psyr_1275	0.23	-1.7
1,440,263	+		Psyr_1275	0.34	-0.0
1,440,264	-		Psyr_1275	0.34	+0.2
1,440,424	+				+1.3
1,440,424	+				-1.0
1,440,424	+				-1.8
1,440,425	-				-0.3
1,440,425	-				+0.6
1,440,425	-				-1.5
1,440,425	-				+1.8
1,440,841	+				+0.5
1,440,864	+				+0.1
1,441,170	+				+0.8