Experiment: KB with Khayasin C 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0994 and Psyr_0995 are separated by 256 nucleotides Psyr_0995 and Psyr_0996 are separated by 26 nucleotides Psyr_0996 and Psyr_0997 are separated by 41 nucleotides
Psyr_0994: Psyr_0994 - Metal-dependent phosphohydrolase, HD subdomain protein, at 1,128,435 to 1,129,616
_0994
Psyr_0995: Psyr_0995 - Flavin reductase-like protein, at 1,129,873 to 1,130,409
_0995
Psyr_0996: Psyr_0996 - Alpha/beta hydrolase fold protein, at 1,130,436 to 1,131,215
_0996
Psyr_0997: Psyr_0997 - Endoribonuclease L-PSP, at 1,131,257 to 1,131,640
_0997
Position (kb) 1129
1130
1131 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 1129.168 kb on + strand, within Psyr_0994 at 1129.168 kb on + strand, within Psyr_0994 at 1129.168 kb on + strand, within Psyr_0994 at 1129.168 kb on + strand, within Psyr_0994 at 1129.168 kb on + strand, within Psyr_0994 at 1129.168 kb on + strand, within Psyr_0994 at 1129.168 kb on + strand, within Psyr_0994 at 1129.168 kb on + strand, within Psyr_0994 at 1129.168 kb on + strand, within Psyr_0994 at 1129.168 kb on + strand, within Psyr_0994 at 1129.168 kb on + strand, within Psyr_0994 at 1129.168 kb on + strand, within Psyr_0994 at 1129.168 kb on + strand, within Psyr_0994 at 1129.168 kb on + strand, within Psyr_0994 at 1129.168 kb on + strand, within Psyr_0994 at 1129.168 kb on + strand, within Psyr_0994 at 1129.168 kb on + strand, within Psyr_0994 at 1129.168 kb on + strand, within Psyr_0994 at 1129.168 kb on + strand, within Psyr_0994 at 1129.169 kb on - strand, within Psyr_0994 at 1129.169 kb on - strand, within Psyr_0994 at 1129.169 kb on - strand, within Psyr_0994 at 1129.169 kb on - strand, within Psyr_0994 at 1129.169 kb on - strand, within Psyr_0994 at 1129.169 kb on - strand, within Psyr_0994 at 1129.169 kb on - strand, within Psyr_0994 at 1129.169 kb on - strand, within Psyr_0994 at 1129.169 kb on - strand, within Psyr_0994 at 1129.169 kb on - strand, within Psyr_0994 at 1129.169 kb on - strand, within Psyr_0994 at 1129.169 kb on - strand, within Psyr_0994 at 1129.169 kb on - strand, within Psyr_0994 at 1129.169 kb on - strand, within Psyr_0994 at 1129.169 kb on - strand, within Psyr_0994 at 1129.174 kb on + strand, within Psyr_0994 at 1129.174 kb on + strand, within Psyr_0994 at 1129.175 kb on - strand, within Psyr_0994 at 1129.389 kb on - strand, within Psyr_0994 at 1129.466 kb on + strand, within Psyr_0994 at 1129.467 kb on - strand, within Psyr_0994 at 1129.527 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.671 kb on + strand at 1129.671 kb on + strand at 1129.672 kb on - strand at 1129.672 kb on - strand at 1129.672 kb on - strand at 1129.672 kb on - strand at 1129.672 kb on - strand at 1129.672 kb on - strand at 1129.801 kb on + strand at 1129.802 kb on - strand at 1129.802 kb on - strand at 1129.802 kb on - strand at 1129.809 kb on - strand at 1129.922 kb on + strand at 1129.922 kb on + strand at 1129.923 kb on - strand at 1130.157 kb on + strand, within Psyr_0995 at 1130.158 kb on - strand, within Psyr_0995 at 1130.195 kb on + strand, within Psyr_0995 at 1130.195 kb on + strand, within Psyr_0995 at 1130.196 kb on - strand, within Psyr_0995 at 1130.196 kb on - strand, within Psyr_0995 at 1130.196 kb on - strand, within Psyr_0995 at 1130.217 kb on + strand, within Psyr_0995 at 1130.217 kb on + strand, within Psyr_0995 at 1130.217 kb on + strand, within Psyr_0995 at 1130.404 kb on - strand at 1130.515 kb on + strand, within Psyr_0996 at 1130.793 kb on + strand, within Psyr_0996 at 1130.793 kb on + strand, within Psyr_0996 at 1130.793 kb on + strand, within Psyr_0996 at 1130.794 kb on - strand, within Psyr_0996 at 1130.794 kb on - strand, within Psyr_0996 at 1130.794 kb on - strand, within Psyr_0996 at 1130.794 kb on - strand, within Psyr_0996 at 1130.794 kb on - strand, within Psyr_0996 at 1130.797 kb on + strand, within Psyr_0996 at 1130.798 kb on - strand, within Psyr_0996 at 1130.798 kb on - strand, within Psyr_0996 at 1130.798 kb on - strand, within Psyr_0996 at 1130.798 kb on - strand, within Psyr_0996 at 1130.798 kb on - strand, within Psyr_0996 at 1130.798 kb on - strand, within Psyr_0996 at 1130.798 kb on - strand, within Psyr_0996 at 1130.890 kb on - strand, within Psyr_0996 at 1131.082 kb on + strand, within Psyr_0996 at 1131.082 kb on + strand, within Psyr_0996 at 1131.082 kb on + strand, within Psyr_0996 at 1131.083 kb on - strand, within Psyr_0996 at 1131.083 kb on - strand, within Psyr_0996 at 1131.083 kb on - strand, within Psyr_0996 at 1131.355 kb on - strand, within Psyr_0997 at 1131.363 kb on + strand, within Psyr_0997 at 1131.363 kb on + strand, within Psyr_0997 at 1131.363 kb on + strand, within Psyr_0997 at 1131.363 kb on + strand, within Psyr_0997 at 1131.363 kb on + strand, within Psyr_0997 at 1131.363 kb on + strand, within Psyr_0997 at 1131.363 kb on + strand, within Psyr_0997 at 1131.363 kb on + strand, within Psyr_0997 at 1131.363 kb on + strand, within Psyr_0997 at 1131.364 kb on - strand, within Psyr_0997 at 1131.364 kb on - strand, within Psyr_0997 at 1131.364 kb on - strand, within Psyr_0997 at 1131.364 kb on - strand, within Psyr_0997 at 1131.364 kb on - strand, within Psyr_0997 at 1131.364 kb on - strand, within Psyr_0997 at 1131.384 kb on + strand, within Psyr_0997
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Khayasin C 10 mM remove 1,129,168 + Psyr_0994 0.62 +0.4 1,129,168 + Psyr_0994 0.62 -0.2 1,129,168 + Psyr_0994 0.62 -1.9 1,129,168 + Psyr_0994 0.62 +1.7 1,129,168 + Psyr_0994 0.62 -0.9 1,129,168 + Psyr_0994 0.62 +0.1 1,129,168 + Psyr_0994 0.62 +1.4 1,129,168 + Psyr_0994 0.62 -1.2 1,129,168 + Psyr_0994 0.62 +0.4 1,129,168 + Psyr_0994 0.62 +1.3 1,129,168 + Psyr_0994 0.62 -0.7 1,129,168 + Psyr_0994 0.62 -1.5 1,129,168 + Psyr_0994 0.62 +0.3 1,129,168 + Psyr_0994 0.62 -0.9 1,129,168 + Psyr_0994 0.62 +0.2 1,129,168 + Psyr_0994 0.62 -0.1 1,129,168 + Psyr_0994 0.62 +2.3 1,129,168 + Psyr_0994 0.62 +1.1 1,129,168 + Psyr_0994 0.62 +1.0 1,129,169 - Psyr_0994 0.62 +1.6 1,129,169 - Psyr_0994 0.62 +0.2 1,129,169 - Psyr_0994 0.62 -0.2 1,129,169 - Psyr_0994 0.62 +0.7 1,129,169 - Psyr_0994 0.62 +0.7 1,129,169 - Psyr_0994 0.62 -0.6 1,129,169 - Psyr_0994 0.62 +0.7 1,129,169 - Psyr_0994 0.62 -0.2 1,129,169 - Psyr_0994 0.62 +1.6 1,129,169 - Psyr_0994 0.62 -0.3 1,129,169 - Psyr_0994 0.62 +3.6 1,129,169 - Psyr_0994 0.62 -1.3 1,129,169 - Psyr_0994 0.62 -0.2 1,129,169 - Psyr_0994 0.62 -1.7 1,129,169 - Psyr_0994 0.62 +0.2 1,129,174 + Psyr_0994 0.63 +0.9 1,129,174 + Psyr_0994 0.63 -0.9 1,129,175 - Psyr_0994 0.63 +0.3 1,129,389 - Psyr_0994 0.81 -0.7 1,129,466 + Psyr_0994 0.87 +0.2 1,129,467 - Psyr_0994 0.87 -0.6 1,129,527 + -0.2 1,129,573 + +0.2 1,129,573 + +1.3 1,129,573 + +1.3 1,129,573 + -0.4 1,129,573 + +0.8 1,129,573 + +0.0 1,129,573 + -0.7 1,129,573 + +1.5 1,129,573 + +1.5 1,129,573 + +0.7 1,129,573 + +0.2 1,129,573 + +0.7 1,129,573 + +0.8 1,129,573 + +0.5 1,129,573 + +0.7 1,129,573 + +0.6 1,129,573 + -0.2 1,129,573 + +1.9 1,129,573 + -0.2 1,129,573 + +0.6 1,129,573 + +0.2 1,129,573 + +0.2 1,129,573 + -0.9 1,129,573 + -1.5 1,129,573 + -0.4 1,129,573 + -0.4 1,129,573 + -1.0 1,129,573 + -0.1 1,129,573 + +0.5 1,129,574 - -0.2 1,129,574 - +0.1 1,129,574 - +0.3 1,129,574 - +0.2 1,129,574 - -0.8 1,129,574 - +0.2 1,129,574 - +1.1 1,129,574 - +0.5 1,129,574 - +0.1 1,129,574 - -0.1 1,129,574 - -1.3 1,129,574 - -0.6 1,129,574 - +0.7 1,129,574 - -0.6 1,129,574 - +2.3 1,129,574 - +0.4 1,129,574 - +0.7 1,129,574 - +0.0 1,129,574 - +0.2 1,129,574 - -0.3 1,129,574 - +1.1 1,129,574 - +1.3 1,129,574 - -0.4 1,129,574 - -0.5 1,129,574 - -2.8 1,129,574 - -0.3 1,129,574 - +1.6 1,129,574 - +0.7 1,129,574 - -0.4 1,129,574 - -1.2 1,129,574 - +0.6 1,129,574 - -0.4 1,129,574 - -0.8 1,129,574 - +0.7 1,129,574 - -0.6 1,129,574 - +0.5 1,129,574 - -0.5 1,129,574 - +1.3 1,129,574 - +0.6 1,129,574 - -0.3 1,129,671 + -0.5 1,129,671 + -0.3 1,129,672 - -0.6 1,129,672 - +0.4 1,129,672 - -0.3 1,129,672 - -0.2 1,129,672 - +0.8 1,129,672 - +0.1 1,129,801 + -0.1 1,129,802 - -0.4 1,129,802 - -0.4 1,129,802 - +0.9 1,129,809 - -0.1 1,129,922 + -1.2 1,129,922 + -0.5 1,129,923 - -0.0 1,130,157 + Psyr_0995 0.53 +0.5 1,130,158 - Psyr_0995 0.53 -1.2 1,130,195 + Psyr_0995 0.60 +0.4 1,130,195 + Psyr_0995 0.60 +0.7 1,130,196 - Psyr_0995 0.60 +0.3 1,130,196 - Psyr_0995 0.60 +1.3 1,130,196 - Psyr_0995 0.60 -0.1 1,130,217 + Psyr_0995 0.64 -0.1 1,130,217 + Psyr_0995 0.64 +0.1 1,130,217 + Psyr_0995 0.64 +0.7 1,130,404 - +0.3 1,130,515 + Psyr_0996 0.10 -1.3 1,130,793 + Psyr_0996 0.46 +1.0 1,130,793 + Psyr_0996 0.46 +0.4 1,130,793 + Psyr_0996 0.46 -0.0 1,130,794 - Psyr_0996 0.46 +0.9 1,130,794 - Psyr_0996 0.46 -1.3 1,130,794 - Psyr_0996 0.46 +0.3 1,130,794 - Psyr_0996 0.46 +1.1 1,130,794 - Psyr_0996 0.46 -0.8 1,130,797 + Psyr_0996 0.46 +1.3 1,130,798 - Psyr_0996 0.46 -1.9 1,130,798 - Psyr_0996 0.46 +0.9 1,130,798 - Psyr_0996 0.46 -0.2 1,130,798 - Psyr_0996 0.46 -0.4 1,130,798 - Psyr_0996 0.46 -0.3 1,130,798 - Psyr_0996 0.46 -0.2 1,130,798 - Psyr_0996 0.46 +1.6 1,130,890 - Psyr_0996 0.58 +0.9 1,131,082 + Psyr_0996 0.83 +0.0 1,131,082 + Psyr_0996 0.83 +0.3 1,131,082 + Psyr_0996 0.83 +0.0 1,131,083 - Psyr_0996 0.83 -0.9 1,131,083 - Psyr_0996 0.83 -0.2 1,131,083 - Psyr_0996 0.83 +1.9 1,131,355 - Psyr_0997 0.26 -0.4 1,131,363 + Psyr_0997 0.28 -1.7 1,131,363 + Psyr_0997 0.28 -0.2 1,131,363 + Psyr_0997 0.28 +0.7 1,131,363 + Psyr_0997 0.28 -0.3 1,131,363 + Psyr_0997 0.28 -0.7 1,131,363 + Psyr_0997 0.28 -0.3 1,131,363 + Psyr_0997 0.28 +2.3 1,131,363 + Psyr_0997 0.28 +0.4 1,131,363 + Psyr_0997 0.28 -1.0 1,131,364 - Psyr_0997 0.28 +2.3 1,131,364 - Psyr_0997 0.28 -0.3 1,131,364 - Psyr_0997 0.28 -1.2 1,131,364 - Psyr_0997 0.28 +0.5 1,131,364 - Psyr_0997 0.28 +0.1 1,131,364 - Psyr_0997 0.28 +0.8 1,131,384 + Psyr_0997 0.33 -1.0
Or see this region's nucleotide sequence