Experiment: KB with Khayasin C 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0785 and Psyr_0786 are separated by 30 nucleotides Psyr_0786 and Psyr_0787 are separated by 46 nucleotides Psyr_0787 and Psyr_0788 are separated by 23 nucleotides Psyr_0788 and Psyr_0789 are separated by 9 nucleotides
Psyr_0785: Psyr_0785 - Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer, at 890,888 to 892,543
_0785
Psyr_0786: Psyr_0786 - CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt, at 892,574 to 894,691
_0786
Psyr_0787: Psyr_0787 - Sulfate transporter/antisigma-factor antagonist STAS, at 894,738 to 895,028
_0787
Psyr_0788: Psyr_0788 - Response regulator receiver, at 895,052 to 895,420
_0788
Psyr_0789: Psyr_0789 - chemotaxis sensory transducer, at 895,430 to 896,647
_0789
Position (kb) 892
893
894
895 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 891.739 kb on + strand, within Psyr_0785 at 891.740 kb on - strand, within Psyr_0785 at 891.956 kb on + strand, within Psyr_0785 at 891.957 kb on - strand, within Psyr_0785 at 892.219 kb on + strand, within Psyr_0785 at 892.220 kb on - strand, within Psyr_0785 at 892.236 kb on + strand, within Psyr_0785 at 892.237 kb on - strand, within Psyr_0785 at 892.530 kb on + strand at 892.531 kb on - strand at 892.531 kb on - strand at 892.531 kb on - strand at 892.549 kb on + strand at 892.549 kb on + strand at 892.549 kb on + strand at 892.550 kb on - strand at 892.550 kb on - strand at 892.550 kb on - strand at 892.550 kb on - strand at 892.550 kb on - strand at 892.631 kb on + strand at 892.631 kb on + strand at 892.631 kb on + strand at 892.631 kb on + strand at 892.632 kb on - strand at 892.632 kb on - strand at 892.632 kb on - strand at 892.632 kb on - strand at 892.872 kb on + strand, within Psyr_0786 at 892.873 kb on - strand, within Psyr_0786 at 892.909 kb on - strand, within Psyr_0786 at 892.986 kb on + strand, within Psyr_0786 at 892.987 kb on - strand, within Psyr_0786 at 893.110 kb on + strand, within Psyr_0786 at 893.110 kb on + strand, within Psyr_0786 at 893.110 kb on + strand, within Psyr_0786 at 893.110 kb on + strand, within Psyr_0786 at 893.110 kb on + strand, within Psyr_0786 at 893.111 kb on - strand, within Psyr_0786 at 893.111 kb on - strand, within Psyr_0786 at 893.111 kb on - strand, within Psyr_0786 at 893.205 kb on + strand, within Psyr_0786 at 893.206 kb on - strand, within Psyr_0786 at 893.206 kb on - strand, within Psyr_0786 at 893.206 kb on - strand, within Psyr_0786 at 893.337 kb on + strand, within Psyr_0786 at 893.763 kb on + strand, within Psyr_0786 at 893.764 kb on - strand, within Psyr_0786 at 893.810 kb on + strand, within Psyr_0786 at 893.845 kb on + strand, within Psyr_0786 at 893.845 kb on + strand, within Psyr_0786 at 893.845 kb on + strand, within Psyr_0786 at 893.845 kb on + strand, within Psyr_0786 at 893.846 kb on - strand, within Psyr_0786 at 893.846 kb on - strand, within Psyr_0786 at 894.214 kb on + strand, within Psyr_0786 at 894.214 kb on + strand, within Psyr_0786 at 894.214 kb on + strand, within Psyr_0786 at 894.214 kb on + strand, within Psyr_0786 at 894.215 kb on - strand, within Psyr_0786 at 894.215 kb on - strand at 894.215 kb on - strand, within Psyr_0786 at 894.509 kb on - strand at 894.682 kb on + strand at 894.682 kb on + strand at 894.683 kb on - strand at 894.683 kb on - strand at 894.683 kb on - strand at 894.683 kb on - strand at 894.685 kb on + strand at 894.685 kb on + strand at 894.685 kb on + strand at 894.686 kb on - strand at 894.686 kb on - strand at 894.722 kb on - strand at 894.739 kb on + strand at 894.758 kb on + strand at 894.758 kb on + strand at 894.758 kb on + strand at 894.758 kb on + strand at 894.758 kb on + strand at 894.758 kb on + strand at 894.758 kb on + strand at 894.758 kb on + strand at 894.759 kb on - strand at 894.759 kb on - strand at 894.759 kb on - strand at 894.759 kb on - strand at 894.762 kb on + strand at 894.762 kb on + strand at 894.762 kb on + strand at 894.763 kb on - strand at 894.763 kb on - strand at 894.763 kb on - strand at 894.961 kb on + strand, within Psyr_0787 at 894.961 kb on + strand, within Psyr_0787 at 894.961 kb on + strand, within Psyr_0787 at 894.962 kb on - strand, within Psyr_0787 at 894.962 kb on - strand, within Psyr_0787 at 894.962 kb on - strand, within Psyr_0787 at 894.962 kb on - strand, within Psyr_0787 at 894.962 kb on - strand, within Psyr_0787 at 894.962 kb on - strand, within Psyr_0787 at 894.962 kb on - strand, within Psyr_0787 at 894.962 kb on - strand, within Psyr_0787 at 894.982 kb on - strand, within Psyr_0787 at 894.982 kb on - strand, within Psyr_0787 at 894.982 kb on - strand, within Psyr_0787 at 895.200 kb on + strand, within Psyr_0788 at 895.200 kb on + strand, within Psyr_0788 at 895.200 kb on + strand, within Psyr_0788 at 895.200 kb on + strand, within Psyr_0788 at 895.200 kb on + strand, within Psyr_0788 at 895.200 kb on + strand, within Psyr_0788 at 895.200 kb on + strand, within Psyr_0788 at 895.201 kb on - strand, within Psyr_0788 at 895.201 kb on - strand, within Psyr_0788 at 895.201 kb on - strand, within Psyr_0788 at 895.341 kb on + strand, within Psyr_0788 at 895.406 kb on + strand at 895.406 kb on + strand at 895.407 kb on - strand at 895.407 kb on - strand at 895.407 kb on - strand at 895.407 kb on - strand at 895.407 kb on - strand at 895.407 kb on - strand at 895.415 kb on - strand at 895.425 kb on + strand at 895.425 kb on + strand at 895.425 kb on + strand at 895.425 kb on + strand at 895.426 kb on - strand at 895.426 kb on - strand at 895.426 kb on - strand at 895.426 kb on - strand at 895.426 kb on - strand at 895.509 kb on + strand at 895.509 kb on + strand at 895.510 kb on - strand at 895.513 kb on + strand at 895.514 kb on - strand at 895.514 kb on - strand at 895.514 kb on - strand at 895.619 kb on + strand, within Psyr_0789 at 895.620 kb on - strand, within Psyr_0789 at 895.620 kb on - strand, within Psyr_0789
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Khayasin C 10 mM remove 891,739 + Psyr_0785 0.51 -1.0 891,740 - Psyr_0785 0.51 -0.0 891,956 + Psyr_0785 0.64 +0.7 891,957 - Psyr_0785 0.65 +1.1 892,219 + Psyr_0785 0.80 -1.1 892,220 - Psyr_0785 0.80 +0.6 892,236 + Psyr_0785 0.81 +0.9 892,237 - Psyr_0785 0.81 -2.6 892,530 + -0.7 892,531 - +0.7 892,531 - +1.2 892,531 - -0.2 892,549 + +0.2 892,549 + -0.4 892,549 + +0.2 892,550 - +0.3 892,550 - +1.1 892,550 - +0.4 892,550 - +2.3 892,550 - -0.5 892,631 + +0.2 892,631 + -0.1 892,631 + -0.7 892,631 + +1.3 892,632 - -0.2 892,632 - -0.0 892,632 - -0.1 892,632 - -0.0 892,872 + Psyr_0786 0.14 -0.3 892,873 - Psyr_0786 0.14 -0.7 892,909 - Psyr_0786 0.16 -2.7 892,986 + Psyr_0786 0.19 +1.8 892,987 - Psyr_0786 0.19 +0.4 893,110 + Psyr_0786 0.25 +0.1 893,110 + Psyr_0786 0.25 +1.9 893,110 + Psyr_0786 0.25 +0.4 893,110 + Psyr_0786 0.25 +0.1 893,110 + Psyr_0786 0.25 -0.2 893,111 - Psyr_0786 0.25 +0.4 893,111 - Psyr_0786 0.25 -0.2 893,111 - Psyr_0786 0.25 -0.0 893,205 + Psyr_0786 0.30 -0.2 893,206 - Psyr_0786 0.30 -0.8 893,206 - Psyr_0786 0.30 +0.9 893,206 - Psyr_0786 0.30 +0.2 893,337 + Psyr_0786 0.36 +1.3 893,763 + Psyr_0786 0.56 +0.8 893,764 - Psyr_0786 0.56 +1.2 893,810 + Psyr_0786 0.58 +0.3 893,845 + Psyr_0786 0.60 +0.6 893,845 + Psyr_0786 0.60 +0.5 893,845 + Psyr_0786 0.60 +0.1 893,845 + Psyr_0786 0.60 +0.1 893,846 - Psyr_0786 0.60 +0.8 893,846 - Psyr_0786 0.60 +0.1 894,214 + Psyr_0786 0.77 +0.5 894,214 + Psyr_0786 0.77 -0.9 894,214 + Psyr_0786 0.77 +0.3 894,214 + Psyr_0786 0.77 -0.8 894,215 - Psyr_0786 0.77 -0.1 894,215 - +2.3 894,215 - Psyr_0786 0.77 -0.1 894,509 - -0.1 894,682 + +1.2 894,682 + -0.1 894,683 - +1.0 894,683 - -0.1 894,683 - +0.9 894,683 - -0.1 894,685 + +0.5 894,685 + +1.1 894,685 + -0.2 894,686 - -1.1 894,686 - +1.0 894,722 - -0.6 894,739 + -0.1 894,758 + -0.7 894,758 + -1.9 894,758 + +0.7 894,758 + -0.9 894,758 + -0.1 894,758 + -1.8 894,758 + +1.9 894,758 + -1.0 894,759 - +0.6 894,759 - -0.5 894,759 - +0.3 894,759 - -1.3 894,762 + +0.5 894,762 + -0.8 894,762 + +0.7 894,763 - +0.3 894,763 - -0.4 894,763 - +0.8 894,961 + Psyr_0787 0.77 +0.6 894,961 + Psyr_0787 0.77 +0.6 894,961 + Psyr_0787 0.77 -0.3 894,962 - Psyr_0787 0.77 +0.3 894,962 - Psyr_0787 0.77 +0.1 894,962 - Psyr_0787 0.77 -0.2 894,962 - Psyr_0787 0.77 +0.2 894,962 - Psyr_0787 0.77 +0.3 894,962 - Psyr_0787 0.77 -1.2 894,962 - Psyr_0787 0.77 -0.3 894,962 - Psyr_0787 0.77 -0.5 894,982 - Psyr_0787 0.84 +0.6 894,982 - Psyr_0787 0.84 +0.9 894,982 - Psyr_0787 0.84 -0.7 895,200 + Psyr_0788 0.40 -0.4 895,200 + Psyr_0788 0.40 +0.7 895,200 + Psyr_0788 0.40 +1.3 895,200 + Psyr_0788 0.40 +0.0 895,200 + Psyr_0788 0.40 +0.8 895,200 + Psyr_0788 0.40 -0.1 895,200 + Psyr_0788 0.40 -0.3 895,201 - Psyr_0788 0.40 +0.1 895,201 - Psyr_0788 0.40 -0.2 895,201 - Psyr_0788 0.40 +0.6 895,341 + Psyr_0788 0.78 +0.7 895,406 + +0.5 895,406 + -0.2 895,407 - +1.5 895,407 - +0.2 895,407 - -0.2 895,407 - +1.5 895,407 - -0.9 895,407 - -0.3 895,415 - +0.6 895,425 + +0.4 895,425 + -0.6 895,425 + +3.7 895,425 + +0.4 895,426 - +0.2 895,426 - +0.4 895,426 - -0.0 895,426 - +0.5 895,426 - +0.8 895,509 + +0.2 895,509 + -0.6 895,510 - +1.1 895,513 + +1.2 895,514 - +0.3 895,514 - +0.1 895,514 - -0.1 895,619 + Psyr_0789 0.16 -1.2 895,620 - Psyr_0789 0.16 -0.5 895,620 - Psyr_0789 0.16 +0.4
Or see this region's nucleotide sequence