Experiment: KB with Khayasin C 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0661 and Psyr_0662 are separated by 78 nucleotides Psyr_0662 and Psyr_0663 are separated by 77 nucleotides
Psyr_0661: Psyr_0661 - adenosine deaminase, at 749,365 to 750,318
_0661
Psyr_0662: Psyr_0662 - 2OG-Fe(II) oxygenase superfamily, at 750,397 to 751,362
_0662
Psyr_0663: Psyr_0663 - nucleoside-binding protein, at 751,440 to 752,534
_0663
Position (kb) 750
751
752 Strain fitness (log2 ratio) -2
-1
0
1
2 at 749.444 kb on + strand at 749.444 kb on + strand at 749.444 kb on + strand at 749.445 kb on - strand at 749.445 kb on - strand at 749.445 kb on - strand at 749.445 kb on - strand at 749.472 kb on - strand, within Psyr_0661 at 749.711 kb on + strand, within Psyr_0661 at 749.711 kb on + strand, within Psyr_0661 at 749.712 kb on - strand, within Psyr_0661 at 749.712 kb on - strand, within Psyr_0661 at 749.712 kb on - strand, within Psyr_0661 at 750.077 kb on + strand, within Psyr_0661 at 750.095 kb on + strand, within Psyr_0661 at 750.095 kb on + strand, within Psyr_0661 at 750.118 kb on + strand, within Psyr_0661 at 750.118 kb on + strand, within Psyr_0661 at 750.118 kb on + strand, within Psyr_0661 at 750.118 kb on + strand, within Psyr_0661 at 750.119 kb on - strand, within Psyr_0661 at 750.119 kb on - strand, within Psyr_0661 at 750.119 kb on - strand, within Psyr_0661 at 750.119 kb on - strand, within Psyr_0661 at 750.134 kb on + strand, within Psyr_0661 at 750.137 kb on + strand, within Psyr_0661 at 750.137 kb on + strand, within Psyr_0661 at 750.137 kb on + strand, within Psyr_0661 at 750.138 kb on - strand, within Psyr_0661 at 750.138 kb on - strand, within Psyr_0661 at 750.138 kb on - strand, within Psyr_0661 at 750.173 kb on + strand, within Psyr_0661 at 750.173 kb on + strand, within Psyr_0661 at 750.173 kb on + strand, within Psyr_0661 at 750.173 kb on + strand, within Psyr_0661 at 750.173 kb on + strand, within Psyr_0661 at 750.173 kb on + strand, within Psyr_0661 at 750.174 kb on - strand, within Psyr_0661 at 750.314 kb on + strand at 750.314 kb on + strand at 750.314 kb on + strand at 750.314 kb on + strand at 750.314 kb on + strand at 750.314 kb on + strand at 750.314 kb on + strand at 750.314 kb on + strand at 750.314 kb on + strand at 750.315 kb on - strand at 750.315 kb on - strand at 750.315 kb on - strand at 750.315 kb on - strand at 750.315 kb on - strand at 750.315 kb on - strand at 750.315 kb on - strand at 750.315 kb on - strand at 750.315 kb on - strand at 750.318 kb on + strand at 750.318 kb on + strand at 750.318 kb on + strand at 750.318 kb on + strand at 750.318 kb on + strand at 750.318 kb on + strand at 750.318 kb on + strand at 750.319 kb on - strand at 750.319 kb on - strand at 750.319 kb on - strand at 750.319 kb on - strand at 750.354 kb on + strand at 750.354 kb on + strand at 750.354 kb on + strand at 750.354 kb on + strand at 750.355 kb on - strand at 750.355 kb on - strand at 750.428 kb on + strand at 750.428 kb on + strand at 750.428 kb on + strand at 750.428 kb on + strand at 750.429 kb on - strand at 750.429 kb on - strand at 750.429 kb on - strand at 750.429 kb on - strand at 750.429 kb on - strand at 750.433 kb on - strand at 750.433 kb on - strand at 750.740 kb on + strand, within Psyr_0662 at 750.839 kb on - strand, within Psyr_0662 at 750.839 kb on - strand, within Psyr_0662 at 750.944 kb on + strand, within Psyr_0662 at 750.944 kb on + strand, within Psyr_0662 at 750.945 kb on - strand, within Psyr_0662 at 750.945 kb on - strand, within Psyr_0662 at 751.250 kb on + strand, within Psyr_0662 at 751.250 kb on + strand, within Psyr_0662 at 751.250 kb on + strand, within Psyr_0662 at 751.250 kb on + strand, within Psyr_0662 at 751.251 kb on - strand, within Psyr_0662 at 751.251 kb on - strand, within Psyr_0662 at 751.251 kb on - strand, within Psyr_0662 at 751.251 kb on - strand, within Psyr_0662 at 751.251 kb on - strand, within Psyr_0662 at 751.251 kb on - strand, within Psyr_0662 at 751.325 kb on + strand at 751.441 kb on + strand at 751.441 kb on + strand at 751.441 kb on + strand at 751.442 kb on - strand at 751.442 kb on - strand at 751.442 kb on - strand at 751.442 kb on - strand at 751.474 kb on + strand at 751.474 kb on + strand at 751.474 kb on + strand at 751.474 kb on + strand at 751.474 kb on + strand at 751.474 kb on + strand at 751.474 kb on + strand at 751.475 kb on - strand at 751.475 kb on - strand at 751.475 kb on - strand at 751.475 kb on - strand at 751.475 kb on - strand at 751.475 kb on - strand at 751.475 kb on - strand at 751.477 kb on + strand at 751.477 kb on + strand at 751.477 kb on + strand at 751.477 kb on + strand at 751.478 kb on - strand at 751.478 kb on - strand at 751.478 kb on - strand at 751.478 kb on - strand at 751.478 kb on - strand at 751.478 kb on - strand at 751.478 kb on - strand at 751.478 kb on - strand at 751.478 kb on - strand at 751.478 kb on - strand at 751.599 kb on + strand, within Psyr_0663 at 751.735 kb on + strand, within Psyr_0663 at 751.735 kb on + strand, within Psyr_0663 at 751.735 kb on + strand, within Psyr_0663 at 751.735 kb on + strand, within Psyr_0663 at 751.736 kb on - strand, within Psyr_0663 at 751.736 kb on - strand, within Psyr_0663 at 751.736 kb on - strand, within Psyr_0663 at 751.820 kb on - strand, within Psyr_0663 at 751.820 kb on - strand, within Psyr_0663 at 751.859 kb on + strand, within Psyr_0663 at 751.876 kb on - strand, within Psyr_0663 at 751.981 kb on + strand, within Psyr_0663 at 751.981 kb on + strand, within Psyr_0663 at 751.981 kb on + strand, within Psyr_0663 at 751.981 kb on + strand, within Psyr_0663 at 751.982 kb on - strand, within Psyr_0663 at 751.982 kb on - strand, within Psyr_0663 at 751.982 kb on - strand, within Psyr_0663 at 751.982 kb on - strand, within Psyr_0663 at 751.982 kb on - strand, within Psyr_0663 at 751.982 kb on - strand, within Psyr_0663 at 752.023 kb on - strand, within Psyr_0663 at 752.051 kb on - strand, within Psyr_0663 at 752.051 kb on - strand, within Psyr_0663 at 752.089 kb on + strand, within Psyr_0663 at 752.089 kb on + strand, within Psyr_0663 at 752.089 kb on + strand, within Psyr_0663 at 752.089 kb on + strand, within Psyr_0663 at 752.089 kb on + strand, within Psyr_0663 at 752.090 kb on - strand, within Psyr_0663 at 752.102 kb on - strand, within Psyr_0663 at 752.102 kb on - strand, within Psyr_0663 at 752.113 kb on + strand, within Psyr_0663 at 752.113 kb on + strand, within Psyr_0663 at 752.113 kb on + strand, within Psyr_0663 at 752.113 kb on + strand, within Psyr_0663 at 752.113 kb on + strand, within Psyr_0663 at 752.113 kb on + strand, within Psyr_0663 at 752.113 kb on + strand, within Psyr_0663 at 752.113 kb on + strand, within Psyr_0663 at 752.113 kb on + strand, within Psyr_0663 at 752.114 kb on - strand, within Psyr_0663 at 752.114 kb on - strand, within Psyr_0663 at 752.114 kb on - strand, within Psyr_0663 at 752.114 kb on - strand, within Psyr_0663 at 752.114 kb on - strand, within Psyr_0663 at 752.114 kb on - strand, within Psyr_0663 at 752.128 kb on + strand, within Psyr_0663 at 752.128 kb on + strand, within Psyr_0663 at 752.128 kb on + strand, within Psyr_0663 at 752.129 kb on - strand, within Psyr_0663 at 752.129 kb on - strand, within Psyr_0663 at 752.129 kb on - strand, within Psyr_0663 at 752.155 kb on + strand, within Psyr_0663 at 752.252 kb on - strand, within Psyr_0663 at 752.317 kb on + strand, within Psyr_0663 at 752.317 kb on + strand, within Psyr_0663 at 752.318 kb on - strand, within Psyr_0663 at 752.318 kb on - strand, within Psyr_0663 at 752.318 kb on - strand, within Psyr_0663 at 752.318 kb on - strand, within Psyr_0663 at 752.318 kb on - strand, within Psyr_0663 at 752.318 kb on - strand, within Psyr_0663 at 752.318 kb on - strand, within Psyr_0663 at 752.318 kb on - strand, within Psyr_0663
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Khayasin C 10 mM remove 749,444 + +0.0 749,444 + +0.7 749,444 + -0.2 749,445 - -0.3 749,445 - +0.1 749,445 - -1.6 749,445 - -1.1 749,472 - Psyr_0661 0.11 +0.0 749,711 + Psyr_0661 0.36 -0.1 749,711 + Psyr_0661 0.36 -0.8 749,712 - Psyr_0661 0.36 -0.3 749,712 - Psyr_0661 0.36 -0.7 749,712 - Psyr_0661 0.36 +1.6 750,077 + Psyr_0661 0.75 +0.1 750,095 + Psyr_0661 0.77 -0.4 750,095 + Psyr_0661 0.77 -0.7 750,118 + Psyr_0661 0.79 -0.8 750,118 + Psyr_0661 0.79 -2.1 750,118 + Psyr_0661 0.79 +0.9 750,118 + Psyr_0661 0.79 +1.0 750,119 - Psyr_0661 0.79 +1.0 750,119 - Psyr_0661 0.79 -0.4 750,119 - Psyr_0661 0.79 +0.7 750,119 - Psyr_0661 0.79 -0.6 750,134 + Psyr_0661 0.81 +1.2 750,137 + Psyr_0661 0.81 -0.2 750,137 + Psyr_0661 0.81 +0.7 750,137 + Psyr_0661 0.81 +0.2 750,138 - Psyr_0661 0.81 +0.5 750,138 - Psyr_0661 0.81 +0.3 750,138 - Psyr_0661 0.81 +1.2 750,173 + Psyr_0661 0.85 -0.3 750,173 + Psyr_0661 0.85 +0.0 750,173 + Psyr_0661 0.85 +0.0 750,173 + Psyr_0661 0.85 -0.5 750,173 + Psyr_0661 0.85 -0.4 750,173 + Psyr_0661 0.85 +0.3 750,174 - Psyr_0661 0.85 +0.6 750,314 + -2.4 750,314 + +1.3 750,314 + +0.6 750,314 + -0.1 750,314 + +0.3 750,314 + +0.9 750,314 + -0.9 750,314 + +0.3 750,314 + -0.6 750,315 - -0.3 750,315 - -0.1 750,315 - -1.0 750,315 - -0.2 750,315 - +0.7 750,315 - +0.6 750,315 - +1.2 750,315 - -0.0 750,315 - +0.6 750,318 + +1.6 750,318 + +0.6 750,318 + -1.0 750,318 + -0.5 750,318 + -1.9 750,318 + -0.6 750,318 + +0.8 750,319 - -0.8 750,319 - -0.7 750,319 - +0.3 750,319 - -0.4 750,354 + -0.9 750,354 + -0.2 750,354 + -0.2 750,354 + -0.3 750,355 - -0.5 750,355 - -1.5 750,428 + -1.7 750,428 + +0.0 750,428 + +1.0 750,428 + -0.1 750,429 - -0.0 750,429 - -0.6 750,429 - +0.5 750,429 - +0.6 750,429 - +1.2 750,433 - -0.4 750,433 - +1.0 750,740 + Psyr_0662 0.36 +0.0 750,839 - Psyr_0662 0.46 -0.6 750,839 - Psyr_0662 0.46 -2.0 750,944 + Psyr_0662 0.57 +0.6 750,944 + Psyr_0662 0.57 -0.9 750,945 - Psyr_0662 0.57 -0.4 750,945 - Psyr_0662 0.57 -0.3 751,250 + Psyr_0662 0.88 +0.9 751,250 + Psyr_0662 0.88 -1.2 751,250 + Psyr_0662 0.88 -1.3 751,250 + Psyr_0662 0.88 -0.7 751,251 - Psyr_0662 0.88 -1.0 751,251 - Psyr_0662 0.88 -0.9 751,251 - Psyr_0662 0.88 -0.4 751,251 - Psyr_0662 0.88 +0.3 751,251 - Psyr_0662 0.88 +0.5 751,251 - Psyr_0662 0.88 -0.1 751,325 + -0.8 751,441 + -0.0 751,441 + +0.5 751,441 + +0.3 751,442 - +0.7 751,442 - +1.3 751,442 - -0.3 751,442 - -1.3 751,474 + -1.1 751,474 + -0.6 751,474 + -0.2 751,474 + +0.5 751,474 + +0.2 751,474 + -0.6 751,474 + +0.8 751,475 - -0.8 751,475 - -0.2 751,475 - -0.7 751,475 - +0.3 751,475 - -2.4 751,475 - +0.3 751,475 - -0.5 751,477 + -0.5 751,477 + -0.5 751,477 + -0.3 751,477 + +0.7 751,478 - +1.1 751,478 - +0.8 751,478 - +0.2 751,478 - +0.4 751,478 - +0.4 751,478 - +1.3 751,478 - +1.3 751,478 - +0.2 751,478 - -0.3 751,478 - +0.6 751,599 + Psyr_0663 0.15 -0.7 751,735 + Psyr_0663 0.27 +2.1 751,735 + Psyr_0663 0.27 -0.3 751,735 + Psyr_0663 0.27 +1.0 751,735 + Psyr_0663 0.27 -0.5 751,736 - Psyr_0663 0.27 +1.3 751,736 - Psyr_0663 0.27 -0.7 751,736 - Psyr_0663 0.27 -0.4 751,820 - Psyr_0663 0.35 +0.4 751,820 - Psyr_0663 0.35 +0.2 751,859 + Psyr_0663 0.38 +0.5 751,876 - Psyr_0663 0.40 +2.3 751,981 + Psyr_0663 0.49 +1.0 751,981 + Psyr_0663 0.49 -0.5 751,981 + Psyr_0663 0.49 -0.3 751,981 + Psyr_0663 0.49 +1.8 751,982 - Psyr_0663 0.49 -0.3 751,982 - Psyr_0663 0.49 -0.3 751,982 - Psyr_0663 0.49 +0.6 751,982 - Psyr_0663 0.49 -1.1 751,982 - Psyr_0663 0.49 +0.8 751,982 - Psyr_0663 0.49 -0.0 752,023 - Psyr_0663 0.53 +1.3 752,051 - Psyr_0663 0.56 +0.4 752,051 - Psyr_0663 0.56 +0.0 752,089 + Psyr_0663 0.59 -1.4 752,089 + Psyr_0663 0.59 +0.3 752,089 + Psyr_0663 0.59 +1.7 752,089 + Psyr_0663 0.59 -0.0 752,089 + Psyr_0663 0.59 +1.2 752,090 - Psyr_0663 0.59 -2.0 752,102 - Psyr_0663 0.60 +0.5 752,102 - Psyr_0663 0.60 +0.2 752,113 + Psyr_0663 0.61 +0.1 752,113 + Psyr_0663 0.61 +1.1 752,113 + Psyr_0663 0.61 -0.1 752,113 + Psyr_0663 0.61 +1.2 752,113 + Psyr_0663 0.61 -0.7 752,113 + Psyr_0663 0.61 -0.2 752,113 + Psyr_0663 0.61 -0.7 752,113 + Psyr_0663 0.61 +0.3 752,113 + Psyr_0663 0.61 +0.7 752,114 - Psyr_0663 0.62 -0.1 752,114 - Psyr_0663 0.62 +0.9 752,114 - Psyr_0663 0.62 +0.8 752,114 - Psyr_0663 0.62 -0.4 752,114 - Psyr_0663 0.62 +0.7 752,114 - Psyr_0663 0.62 -0.1 752,128 + Psyr_0663 0.63 -0.5 752,128 + Psyr_0663 0.63 -0.7 752,128 + Psyr_0663 0.63 +1.5 752,129 - Psyr_0663 0.63 +0.2 752,129 - Psyr_0663 0.63 -1.0 752,129 - Psyr_0663 0.63 +1.1 752,155 + Psyr_0663 0.65 +1.7 752,252 - Psyr_0663 0.74 -0.8 752,317 + Psyr_0663 0.80 +0.0 752,317 + Psyr_0663 0.80 -0.5 752,318 - Psyr_0663 0.80 -0.1 752,318 - Psyr_0663 0.80 -0.5 752,318 - Psyr_0663 0.80 +1.0 752,318 - Psyr_0663 0.80 +0.5 752,318 - Psyr_0663 0.80 -0.4 752,318 - Psyr_0663 0.80 -0.1 752,318 - Psyr_0663 0.80 +0.0 752,318 - Psyr_0663 0.80 -0.4
Or see this region's nucleotide sequence