Experiment: KB with Khayasin C 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0660 and Psyr_0661 are separated by 159 nucleotides Psyr_0661 and Psyr_0662 are separated by 78 nucleotides
Psyr_0660: Psyr_0660 - transcriptional regulator, ArsR family, at 748,513 to 749,205
_0660
Psyr_0661: Psyr_0661 - adenosine deaminase, at 749,365 to 750,318
_0661
Psyr_0662: Psyr_0662 - 2OG-Fe(II) oxygenase superfamily, at 750,397 to 751,362
_0662
Position (kb) 749
750
751 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 748.367 kb on + strand at 748.368 kb on - strand at 748.404 kb on - strand at 748.404 kb on - strand at 748.410 kb on + strand at 748.412 kb on + strand at 748.412 kb on + strand at 748.412 kb on + strand at 748.413 kb on - strand at 748.413 kb on - strand at 748.413 kb on - strand at 748.423 kb on - strand at 748.423 kb on - strand at 748.423 kb on - strand at 748.423 kb on - strand at 748.426 kb on + strand at 748.426 kb on + strand at 748.426 kb on + strand at 748.426 kb on + strand at 748.426 kb on + strand at 748.426 kb on + strand at 748.426 kb on + strand at 748.426 kb on + strand at 748.426 kb on + strand at 748.427 kb on - strand at 748.427 kb on - strand at 748.427 kb on - strand at 748.427 kb on - strand at 748.427 kb on - strand at 748.428 kb on + strand at 748.428 kb on + strand at 748.428 kb on + strand at 748.428 kb on + strand at 748.428 kb on + strand at 748.429 kb on - strand at 748.429 kb on - strand at 748.429 kb on - strand at 748.429 kb on - strand at 748.429 kb on - strand at 748.429 kb on - strand at 748.483 kb on + strand at 748.483 kb on + strand at 748.483 kb on + strand at 748.483 kb on + strand at 748.483 kb on + strand at 748.484 kb on - strand at 748.484 kb on - strand at 748.484 kb on - strand at 748.484 kb on - strand at 748.484 kb on - strand at 748.484 kb on - strand at 748.484 kb on - strand at 748.484 kb on - strand at 748.599 kb on + strand, within Psyr_0660 at 748.599 kb on + strand, within Psyr_0660 at 748.599 kb on + strand, within Psyr_0660 at 748.600 kb on - strand, within Psyr_0660 at 748.792 kb on - strand, within Psyr_0660 at 748.926 kb on - strand, within Psyr_0660 at 748.926 kb on - strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.997 kb on + strand, within Psyr_0660 at 749.257 kb on + strand at 749.367 kb on - strand at 749.444 kb on + strand at 749.444 kb on + strand at 749.444 kb on + strand at 749.445 kb on - strand at 749.445 kb on - strand at 749.445 kb on - strand at 749.445 kb on - strand at 749.472 kb on - strand, within Psyr_0661 at 749.711 kb on + strand, within Psyr_0661 at 749.711 kb on + strand, within Psyr_0661 at 749.712 kb on - strand, within Psyr_0661 at 749.712 kb on - strand, within Psyr_0661 at 749.712 kb on - strand, within Psyr_0661 at 750.077 kb on + strand, within Psyr_0661 at 750.095 kb on + strand, within Psyr_0661 at 750.095 kb on + strand, within Psyr_0661 at 750.118 kb on + strand, within Psyr_0661 at 750.118 kb on + strand, within Psyr_0661 at 750.118 kb on + strand, within Psyr_0661 at 750.118 kb on + strand, within Psyr_0661 at 750.119 kb on - strand, within Psyr_0661 at 750.119 kb on - strand, within Psyr_0661 at 750.119 kb on - strand, within Psyr_0661 at 750.119 kb on - strand, within Psyr_0661 at 750.134 kb on + strand, within Psyr_0661 at 750.137 kb on + strand, within Psyr_0661 at 750.137 kb on + strand, within Psyr_0661 at 750.137 kb on + strand, within Psyr_0661 at 750.138 kb on - strand, within Psyr_0661 at 750.138 kb on - strand, within Psyr_0661 at 750.138 kb on - strand, within Psyr_0661 at 750.173 kb on + strand, within Psyr_0661 at 750.173 kb on + strand, within Psyr_0661 at 750.173 kb on + strand, within Psyr_0661 at 750.173 kb on + strand, within Psyr_0661 at 750.173 kb on + strand, within Psyr_0661 at 750.173 kb on + strand, within Psyr_0661 at 750.174 kb on - strand, within Psyr_0661 at 750.314 kb on + strand at 750.314 kb on + strand at 750.314 kb on + strand at 750.314 kb on + strand at 750.314 kb on + strand at 750.314 kb on + strand at 750.314 kb on + strand at 750.314 kb on + strand at 750.314 kb on + strand at 750.315 kb on - strand at 750.315 kb on - strand at 750.315 kb on - strand at 750.315 kb on - strand at 750.315 kb on - strand at 750.315 kb on - strand at 750.315 kb on - strand at 750.315 kb on - strand at 750.315 kb on - strand at 750.318 kb on + strand at 750.318 kb on + strand at 750.318 kb on + strand at 750.318 kb on + strand at 750.318 kb on + strand at 750.318 kb on + strand at 750.318 kb on + strand at 750.319 kb on - strand at 750.319 kb on - strand at 750.319 kb on - strand at 750.319 kb on - strand at 750.354 kb on + strand at 750.354 kb on + strand at 750.354 kb on + strand at 750.354 kb on + strand at 750.355 kb on - strand at 750.355 kb on - strand at 750.428 kb on + strand at 750.428 kb on + strand at 750.428 kb on + strand at 750.428 kb on + strand at 750.429 kb on - strand at 750.429 kb on - strand at 750.429 kb on - strand at 750.429 kb on - strand at 750.429 kb on - strand at 750.433 kb on - strand at 750.433 kb on - strand at 750.740 kb on + strand, within Psyr_0662 at 750.839 kb on - strand, within Psyr_0662 at 750.839 kb on - strand, within Psyr_0662 at 750.944 kb on + strand, within Psyr_0662 at 750.944 kb on + strand, within Psyr_0662 at 750.945 kb on - strand, within Psyr_0662 at 750.945 kb on - strand, within Psyr_0662 at 751.250 kb on + strand, within Psyr_0662 at 751.250 kb on + strand, within Psyr_0662 at 751.250 kb on + strand, within Psyr_0662 at 751.250 kb on + strand, within Psyr_0662 at 751.251 kb on - strand, within Psyr_0662 at 751.251 kb on - strand, within Psyr_0662 at 751.251 kb on - strand, within Psyr_0662 at 751.251 kb on - strand, within Psyr_0662 at 751.251 kb on - strand, within Psyr_0662 at 751.251 kb on - strand, within Psyr_0662
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Khayasin C 10 mM remove 748,367 + +0.2 748,368 - -1.5 748,404 - -0.1 748,404 - -0.1 748,410 + +0.0 748,412 + +1.3 748,412 + -1.0 748,412 + -0.0 748,413 - +0.0 748,413 - +1.1 748,413 - -0.1 748,423 - +0.2 748,423 - -2.1 748,423 - +0.0 748,423 - +0.5 748,426 + +0.1 748,426 + -0.8 748,426 + -0.3 748,426 + -1.1 748,426 + -1.0 748,426 + -1.0 748,426 + -1.7 748,426 + -2.8 748,426 + +0.6 748,427 - -1.0 748,427 - +1.5 748,427 - -0.3 748,427 - +0.2 748,427 - +0.2 748,428 + +0.3 748,428 + -0.7 748,428 + -2.1 748,428 + +0.3 748,428 + +1.0 748,429 - +0.1 748,429 - -0.3 748,429 - +1.4 748,429 - -0.1 748,429 - -0.5 748,429 - +1.7 748,483 + -0.8 748,483 + -1.7 748,483 + -0.7 748,483 + +0.3 748,483 + -0.5 748,484 - +3.1 748,484 - -0.0 748,484 - +1.8 748,484 - -1.7 748,484 - -1.1 748,484 - +0.1 748,484 - +0.0 748,484 - -0.5 748,599 + Psyr_0660 0.12 +0.1 748,599 + Psyr_0660 0.12 +1.7 748,599 + Psyr_0660 0.12 -0.1 748,600 - Psyr_0660 0.13 +0.3 748,792 - Psyr_0660 0.40 +0.2 748,926 - Psyr_0660 0.60 +1.1 748,926 - Psyr_0660 0.60 -1.7 748,993 + Psyr_0660 0.69 -0.5 748,993 + Psyr_0660 0.69 -0.0 748,993 + Psyr_0660 0.69 -0.6 748,993 + Psyr_0660 0.69 +1.0 748,993 + Psyr_0660 0.69 +0.0 748,993 + Psyr_0660 0.69 -0.3 748,993 + Psyr_0660 0.69 -0.5 748,993 + Psyr_0660 0.69 +1.8 748,993 + Psyr_0660 0.69 +0.0 748,993 + Psyr_0660 0.69 +0.2 748,993 + Psyr_0660 0.69 -0.8 748,993 + Psyr_0660 0.69 +0.7 748,993 + Psyr_0660 0.69 +0.2 748,993 + Psyr_0660 0.69 -1.1 748,993 + Psyr_0660 0.69 +0.8 748,993 + Psyr_0660 0.69 +1.2 748,993 + Psyr_0660 0.69 +1.0 748,993 + Psyr_0660 0.69 +0.3 748,993 + Psyr_0660 0.69 +1.7 748,993 + Psyr_0660 0.69 +0.7 748,993 + Psyr_0660 0.69 +0.0 748,993 + Psyr_0660 0.69 +1.3 748,993 + Psyr_0660 0.69 +0.3 748,994 - Psyr_0660 0.69 -0.4 748,994 - Psyr_0660 0.69 +0.0 748,994 - Psyr_0660 0.69 -0.9 748,994 - Psyr_0660 0.69 -0.2 748,994 - Psyr_0660 0.69 +0.0 748,994 - Psyr_0660 0.69 +0.0 748,994 - Psyr_0660 0.69 -0.3 748,994 - Psyr_0660 0.69 -1.7 748,994 - Psyr_0660 0.69 +2.1 748,994 - -0.3 748,994 - Psyr_0660 0.69 +0.7 748,994 - Psyr_0660 0.69 -0.3 748,994 - Psyr_0660 0.69 -0.4 748,994 - Psyr_0660 0.69 +0.5 748,994 - Psyr_0660 0.69 +1.0 748,994 - Psyr_0660 0.69 -0.5 748,994 - Psyr_0660 0.69 -0.3 748,994 - Psyr_0660 0.69 -0.4 748,994 - Psyr_0660 0.69 -0.1 748,994 - Psyr_0660 0.69 +0.1 748,994 - Psyr_0660 0.69 +1.2 748,994 - Psyr_0660 0.69 -1.1 748,994 - Psyr_0660 0.69 +0.0 748,994 - Psyr_0660 0.69 -0.2 748,994 - Psyr_0660 0.69 +1.0 748,997 + Psyr_0660 0.70 -0.1 749,257 + +0.3 749,367 - +0.3 749,444 + +0.0 749,444 + +0.7 749,444 + -0.2 749,445 - -0.3 749,445 - +0.1 749,445 - -1.6 749,445 - -1.1 749,472 - Psyr_0661 0.11 +0.0 749,711 + Psyr_0661 0.36 -0.1 749,711 + Psyr_0661 0.36 -0.8 749,712 - Psyr_0661 0.36 -0.3 749,712 - Psyr_0661 0.36 -0.7 749,712 - Psyr_0661 0.36 +1.6 750,077 + Psyr_0661 0.75 +0.1 750,095 + Psyr_0661 0.77 -0.4 750,095 + Psyr_0661 0.77 -0.7 750,118 + Psyr_0661 0.79 -0.8 750,118 + Psyr_0661 0.79 -2.1 750,118 + Psyr_0661 0.79 +0.9 750,118 + Psyr_0661 0.79 +1.0 750,119 - Psyr_0661 0.79 +1.0 750,119 - Psyr_0661 0.79 -0.4 750,119 - Psyr_0661 0.79 +0.7 750,119 - Psyr_0661 0.79 -0.6 750,134 + Psyr_0661 0.81 +1.2 750,137 + Psyr_0661 0.81 -0.2 750,137 + Psyr_0661 0.81 +0.7 750,137 + Psyr_0661 0.81 +0.2 750,138 - Psyr_0661 0.81 +0.5 750,138 - Psyr_0661 0.81 +0.3 750,138 - Psyr_0661 0.81 +1.2 750,173 + Psyr_0661 0.85 -0.3 750,173 + Psyr_0661 0.85 +0.0 750,173 + Psyr_0661 0.85 +0.0 750,173 + Psyr_0661 0.85 -0.5 750,173 + Psyr_0661 0.85 -0.4 750,173 + Psyr_0661 0.85 +0.3 750,174 - Psyr_0661 0.85 +0.6 750,314 + -2.4 750,314 + +1.3 750,314 + +0.6 750,314 + -0.1 750,314 + +0.3 750,314 + +0.9 750,314 + -0.9 750,314 + +0.3 750,314 + -0.6 750,315 - -0.3 750,315 - -0.1 750,315 - -1.0 750,315 - -0.2 750,315 - +0.7 750,315 - +0.6 750,315 - +1.2 750,315 - -0.0 750,315 - +0.6 750,318 + +1.6 750,318 + +0.6 750,318 + -1.0 750,318 + -0.5 750,318 + -1.9 750,318 + -0.6 750,318 + +0.8 750,319 - -0.8 750,319 - -0.7 750,319 - +0.3 750,319 - -0.4 750,354 + -0.9 750,354 + -0.2 750,354 + -0.2 750,354 + -0.3 750,355 - -0.5 750,355 - -1.5 750,428 + -1.7 750,428 + +0.0 750,428 + +1.0 750,428 + -0.1 750,429 - -0.0 750,429 - -0.6 750,429 - +0.5 750,429 - +0.6 750,429 - +1.2 750,433 - -0.4 750,433 - +1.0 750,740 + Psyr_0662 0.36 +0.0 750,839 - Psyr_0662 0.46 -0.6 750,839 - Psyr_0662 0.46 -2.0 750,944 + Psyr_0662 0.57 +0.6 750,944 + Psyr_0662 0.57 -0.9 750,945 - Psyr_0662 0.57 -0.4 750,945 - Psyr_0662 0.57 -0.3 751,250 + Psyr_0662 0.88 +0.9 751,250 + Psyr_0662 0.88 -1.2 751,250 + Psyr_0662 0.88 -1.3 751,250 + Psyr_0662 0.88 -0.7 751,251 - Psyr_0662 0.88 -1.0 751,251 - Psyr_0662 0.88 -0.9 751,251 - Psyr_0662 0.88 -0.4 751,251 - Psyr_0662 0.88 +0.3 751,251 - Psyr_0662 0.88 +0.5 751,251 - Psyr_0662 0.88 -0.1
Or see this region's nucleotide sequence