Experiment: KB with Khayasin C 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0659 and Psyr_0660 are separated by 436 nucleotides Psyr_0660 and Psyr_0661 are separated by 159 nucleotides
Psyr_0659: Psyr_0659 - transcriptional regulator, LysR family, at 747,153 to 748,076
_0659
Psyr_0660: Psyr_0660 - transcriptional regulator, ArsR family, at 748,513 to 749,205
_0660
Psyr_0661: Psyr_0661 - adenosine deaminase, at 749,365 to 750,318
_0661
Position (kb) 748
749
750 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 747.542 kb on + strand, within Psyr_0659 at 747.666 kb on + strand, within Psyr_0659 at 747.666 kb on + strand, within Psyr_0659 at 747.666 kb on + strand, within Psyr_0659 at 747.716 kb on + strand, within Psyr_0659 at 747.716 kb on + strand, within Psyr_0659 at 747.717 kb on - strand, within Psyr_0659 at 747.717 kb on - strand, within Psyr_0659 at 747.871 kb on - strand, within Psyr_0659 at 747.871 kb on - strand, within Psyr_0659 at 747.871 kb on - strand, within Psyr_0659 at 747.992 kb on + strand at 748.034 kb on + strand at 748.034 kb on + strand at 748.034 kb on + strand at 748.035 kb on - strand at 748.035 kb on - strand at 748.035 kb on - strand at 748.035 kb on - strand at 748.035 kb on - strand at 748.035 kb on - strand at 748.035 kb on - strand at 748.048 kb on + strand at 748.048 kb on + strand at 748.049 kb on - strand at 748.049 kb on - strand at 748.049 kb on - strand at 748.074 kb on + strand at 748.098 kb on + strand at 748.098 kb on + strand at 748.123 kb on + strand at 748.222 kb on - strand at 748.270 kb on + strand at 748.270 kb on + strand at 748.270 kb on + strand at 748.271 kb on - strand at 748.271 kb on - strand at 748.271 kb on - strand at 748.271 kb on - strand at 748.271 kb on - strand at 748.271 kb on - strand at 748.271 kb on - strand at 748.271 kb on - strand at 748.288 kb on + strand at 748.289 kb on - strand at 748.299 kb on - strand at 748.367 kb on + strand at 748.368 kb on - strand at 748.404 kb on - strand at 748.404 kb on - strand at 748.410 kb on + strand at 748.412 kb on + strand at 748.412 kb on + strand at 748.412 kb on + strand at 748.413 kb on - strand at 748.413 kb on - strand at 748.413 kb on - strand at 748.423 kb on - strand at 748.423 kb on - strand at 748.423 kb on - strand at 748.423 kb on - strand at 748.426 kb on + strand at 748.426 kb on + strand at 748.426 kb on + strand at 748.426 kb on + strand at 748.426 kb on + strand at 748.426 kb on + strand at 748.426 kb on + strand at 748.426 kb on + strand at 748.426 kb on + strand at 748.427 kb on - strand at 748.427 kb on - strand at 748.427 kb on - strand at 748.427 kb on - strand at 748.427 kb on - strand at 748.428 kb on + strand at 748.428 kb on + strand at 748.428 kb on + strand at 748.428 kb on + strand at 748.428 kb on + strand at 748.429 kb on - strand at 748.429 kb on - strand at 748.429 kb on - strand at 748.429 kb on - strand at 748.429 kb on - strand at 748.429 kb on - strand at 748.483 kb on + strand at 748.483 kb on + strand at 748.483 kb on + strand at 748.483 kb on + strand at 748.483 kb on + strand at 748.484 kb on - strand at 748.484 kb on - strand at 748.484 kb on - strand at 748.484 kb on - strand at 748.484 kb on - strand at 748.484 kb on - strand at 748.484 kb on - strand at 748.484 kb on - strand at 748.599 kb on + strand, within Psyr_0660 at 748.599 kb on + strand, within Psyr_0660 at 748.599 kb on + strand, within Psyr_0660 at 748.600 kb on - strand, within Psyr_0660 at 748.792 kb on - strand, within Psyr_0660 at 748.926 kb on - strand, within Psyr_0660 at 748.926 kb on - strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.997 kb on + strand, within Psyr_0660 at 749.257 kb on + strand at 749.367 kb on - strand at 749.444 kb on + strand at 749.444 kb on + strand at 749.444 kb on + strand at 749.445 kb on - strand at 749.445 kb on - strand at 749.445 kb on - strand at 749.445 kb on - strand at 749.472 kb on - strand, within Psyr_0661 at 749.711 kb on + strand, within Psyr_0661 at 749.711 kb on + strand, within Psyr_0661 at 749.712 kb on - strand, within Psyr_0661 at 749.712 kb on - strand, within Psyr_0661 at 749.712 kb on - strand, within Psyr_0661 at 750.077 kb on + strand, within Psyr_0661 at 750.095 kb on + strand, within Psyr_0661 at 750.095 kb on + strand, within Psyr_0661 at 750.118 kb on + strand, within Psyr_0661 at 750.118 kb on + strand, within Psyr_0661 at 750.118 kb on + strand, within Psyr_0661 at 750.118 kb on + strand, within Psyr_0661 at 750.119 kb on - strand, within Psyr_0661 at 750.119 kb on - strand, within Psyr_0661 at 750.119 kb on - strand, within Psyr_0661 at 750.119 kb on - strand, within Psyr_0661 at 750.134 kb on + strand, within Psyr_0661 at 750.137 kb on + strand, within Psyr_0661 at 750.137 kb on + strand, within Psyr_0661 at 750.137 kb on + strand, within Psyr_0661 at 750.138 kb on - strand, within Psyr_0661 at 750.138 kb on - strand, within Psyr_0661 at 750.138 kb on - strand, within Psyr_0661 at 750.173 kb on + strand, within Psyr_0661 at 750.173 kb on + strand, within Psyr_0661 at 750.173 kb on + strand, within Psyr_0661 at 750.173 kb on + strand, within Psyr_0661 at 750.173 kb on + strand, within Psyr_0661 at 750.173 kb on + strand, within Psyr_0661 at 750.174 kb on - strand, within Psyr_0661
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Khayasin C 10 mM remove 747,542 + Psyr_0659 0.42 +0.9 747,666 + Psyr_0659 0.56 -0.1 747,666 + Psyr_0659 0.56 -0.1 747,666 + Psyr_0659 0.56 +0.2 747,716 + Psyr_0659 0.61 +1.1 747,716 + Psyr_0659 0.61 -0.4 747,717 - Psyr_0659 0.61 -0.3 747,717 - Psyr_0659 0.61 +0.3 747,871 - Psyr_0659 0.78 +0.5 747,871 - Psyr_0659 0.78 -0.4 747,871 - Psyr_0659 0.78 -0.2 747,992 + +0.2 748,034 + -0.2 748,034 + -0.3 748,034 + +0.3 748,035 - -2.1 748,035 - +0.8 748,035 - -0.9 748,035 - -0.7 748,035 - +0.6 748,035 - +0.5 748,035 - -0.2 748,048 + +0.4 748,048 + -0.2 748,049 - -0.6 748,049 - +0.4 748,049 - +0.7 748,074 + +0.5 748,098 + +0.7 748,098 + +0.8 748,123 + +0.7 748,222 - -1.1 748,270 + +0.7 748,270 + -0.1 748,270 + +1.4 748,271 - +0.0 748,271 - -0.4 748,271 - +0.0 748,271 - -0.3 748,271 - +0.5 748,271 - -0.9 748,271 - +0.7 748,271 - +0.1 748,288 + -0.1 748,289 - +0.1 748,299 - +0.8 748,367 + +0.2 748,368 - -1.5 748,404 - -0.1 748,404 - -0.1 748,410 + +0.0 748,412 + +1.3 748,412 + -1.0 748,412 + -0.0 748,413 - +0.0 748,413 - +1.1 748,413 - -0.1 748,423 - +0.2 748,423 - -2.1 748,423 - +0.0 748,423 - +0.5 748,426 + +0.1 748,426 + -0.8 748,426 + -0.3 748,426 + -1.1 748,426 + -1.0 748,426 + -1.0 748,426 + -1.7 748,426 + -2.8 748,426 + +0.6 748,427 - -1.0 748,427 - +1.5 748,427 - -0.3 748,427 - +0.2 748,427 - +0.2 748,428 + +0.3 748,428 + -0.7 748,428 + -2.1 748,428 + +0.3 748,428 + +1.0 748,429 - +0.1 748,429 - -0.3 748,429 - +1.4 748,429 - -0.1 748,429 - -0.5 748,429 - +1.7 748,483 + -0.8 748,483 + -1.7 748,483 + -0.7 748,483 + +0.3 748,483 + -0.5 748,484 - +3.1 748,484 - -0.0 748,484 - +1.8 748,484 - -1.7 748,484 - -1.1 748,484 - +0.1 748,484 - +0.0 748,484 - -0.5 748,599 + Psyr_0660 0.12 +0.1 748,599 + Psyr_0660 0.12 +1.7 748,599 + Psyr_0660 0.12 -0.1 748,600 - Psyr_0660 0.13 +0.3 748,792 - Psyr_0660 0.40 +0.2 748,926 - Psyr_0660 0.60 +1.1 748,926 - Psyr_0660 0.60 -1.7 748,993 + Psyr_0660 0.69 -0.5 748,993 + Psyr_0660 0.69 -0.0 748,993 + Psyr_0660 0.69 -0.6 748,993 + Psyr_0660 0.69 +1.0 748,993 + Psyr_0660 0.69 +0.0 748,993 + Psyr_0660 0.69 -0.3 748,993 + Psyr_0660 0.69 -0.5 748,993 + Psyr_0660 0.69 +1.8 748,993 + Psyr_0660 0.69 +0.0 748,993 + Psyr_0660 0.69 +0.2 748,993 + Psyr_0660 0.69 -0.8 748,993 + Psyr_0660 0.69 +0.7 748,993 + Psyr_0660 0.69 +0.2 748,993 + Psyr_0660 0.69 -1.1 748,993 + Psyr_0660 0.69 +0.8 748,993 + Psyr_0660 0.69 +1.2 748,993 + Psyr_0660 0.69 +1.0 748,993 + Psyr_0660 0.69 +0.3 748,993 + Psyr_0660 0.69 +1.7 748,993 + Psyr_0660 0.69 +0.7 748,993 + Psyr_0660 0.69 +0.0 748,993 + Psyr_0660 0.69 +1.3 748,993 + Psyr_0660 0.69 +0.3 748,994 - Psyr_0660 0.69 -0.4 748,994 - Psyr_0660 0.69 +0.0 748,994 - Psyr_0660 0.69 -0.9 748,994 - Psyr_0660 0.69 -0.2 748,994 - Psyr_0660 0.69 +0.0 748,994 - Psyr_0660 0.69 +0.0 748,994 - Psyr_0660 0.69 -0.3 748,994 - Psyr_0660 0.69 -1.7 748,994 - Psyr_0660 0.69 +2.1 748,994 - -0.3 748,994 - Psyr_0660 0.69 +0.7 748,994 - Psyr_0660 0.69 -0.3 748,994 - Psyr_0660 0.69 -0.4 748,994 - Psyr_0660 0.69 +0.5 748,994 - Psyr_0660 0.69 +1.0 748,994 - Psyr_0660 0.69 -0.5 748,994 - Psyr_0660 0.69 -0.3 748,994 - Psyr_0660 0.69 -0.4 748,994 - Psyr_0660 0.69 -0.1 748,994 - Psyr_0660 0.69 +0.1 748,994 - Psyr_0660 0.69 +1.2 748,994 - Psyr_0660 0.69 -1.1 748,994 - Psyr_0660 0.69 +0.0 748,994 - Psyr_0660 0.69 -0.2 748,994 - Psyr_0660 0.69 +1.0 748,997 + Psyr_0660 0.70 -0.1 749,257 + +0.3 749,367 - +0.3 749,444 + +0.0 749,444 + +0.7 749,444 + -0.2 749,445 - -0.3 749,445 - +0.1 749,445 - -1.6 749,445 - -1.1 749,472 - Psyr_0661 0.11 +0.0 749,711 + Psyr_0661 0.36 -0.1 749,711 + Psyr_0661 0.36 -0.8 749,712 - Psyr_0661 0.36 -0.3 749,712 - Psyr_0661 0.36 -0.7 749,712 - Psyr_0661 0.36 +1.6 750,077 + Psyr_0661 0.75 +0.1 750,095 + Psyr_0661 0.77 -0.4 750,095 + Psyr_0661 0.77 -0.7 750,118 + Psyr_0661 0.79 -0.8 750,118 + Psyr_0661 0.79 -2.1 750,118 + Psyr_0661 0.79 +0.9 750,118 + Psyr_0661 0.79 +1.0 750,119 - Psyr_0661 0.79 +1.0 750,119 - Psyr_0661 0.79 -0.4 750,119 - Psyr_0661 0.79 +0.7 750,119 - Psyr_0661 0.79 -0.6 750,134 + Psyr_0661 0.81 +1.2 750,137 + Psyr_0661 0.81 -0.2 750,137 + Psyr_0661 0.81 +0.7 750,137 + Psyr_0661 0.81 +0.2 750,138 - Psyr_0661 0.81 +0.5 750,138 - Psyr_0661 0.81 +0.3 750,138 - Psyr_0661 0.81 +1.2 750,173 + Psyr_0661 0.85 -0.3 750,173 + Psyr_0661 0.85 +0.0 750,173 + Psyr_0661 0.85 +0.0 750,173 + Psyr_0661 0.85 -0.5 750,173 + Psyr_0661 0.85 -0.4 750,173 + Psyr_0661 0.85 +0.3 750,174 - Psyr_0661 0.85 +0.6
Or see this region's nucleotide sequence