Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_0149

Experiment: KB with Khayasin C 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Khayasin C 10 mM
160,333	+		Psyr_0147	0.47	+0.2
160,333	+		Psyr_0147	0.47	-1.5
160,334	-		Psyr_0147	0.47	+1.1
160,334	-		Psyr_0147	0.47	-0.5
160,415	+		Psyr_0147	0.56	-0.6
160,416	-		Psyr_0147	0.56	-0.1
160,416	-		Psyr_0147	0.56	-1.1
160,416	-		Psyr_0147	0.56	-0.4
160,556	-		Psyr_0147	0.71	-1.8
160,556	-		Psyr_0147	0.71	-0.2
160,817	+				-0.8
160,820	+				+0.2
160,821	-				-1.3
160,821	-				+1.3
160,821	-				+0.5
160,821	-				+0.3
160,821	-				-1.3
160,857	+				-1.4
160,857	+				-0.6
160,857	+				-0.1
160,857	+				-1.6
160,858	-				+0.5
161,013	+		Psyr_0148	0.59	+0.6
161,013	+		Psyr_0148	0.59	-0.6
161,013	+		Psyr_0148	0.59	-1.1
161,013	+		Psyr_0148	0.59	-1.1
161,013	+		Psyr_0148	0.59	+1.4
161,014	-		Psyr_0148	0.59	+0.7
161,067	+		Psyr_0148	0.81	-0.1
161,067	+		Psyr_0148	0.81	+0.5
161,128	+				-0.6
161,190	+				-0.2
161,190	+				-1.7
161,191	-				+0.7
161,227	-				-0.4
161,227	-				-0.4
161,388	+		Psyr_0149	0.14	+0.5
161,388	+		Psyr_0149	0.14	+2.5
161,389	-		Psyr_0149	0.14	+0.5
161,389	-		Psyr_0149	0.14	+0.5
161,389	-		Psyr_0149	0.14	+0.2
161,389	-		Psyr_0149	0.14	+0.8
161,392	-		Psyr_0149	0.14	+0.7
161,392	-		Psyr_0149	0.14	+1.4
161,526	-		Psyr_0149	0.23	+0.5
161,733	+		Psyr_0149	0.37	-2.0
161,734	-		Psyr_0149	0.37	-1.0
161,734	-		Psyr_0149	0.37	+0.3
162,037	+		Psyr_0149	0.58	+0.7
162,258	+		Psyr_0149	0.73	+0.5
162,259	-		Psyr_0149	0.73	+0.2
162,597	+				-0.2
162,597	+				-0.4
162,598	-				-0.7
162,598	-				-0.5
162,608	+				-0.9
162,680	-				-2.6
162,763	-				+1.5
162,763	-				-0.1
162,927	+		Psyr_0150	0.14	-0.1
162,928	-		Psyr_0150	0.14	+2.0
162,928	-		Psyr_0150	0.14	+0.5
163,076	+		Psyr_0150	0.27	+0.7
163,076	+		Psyr_0150	0.27	+0.4
163,077	-		Psyr_0150	0.27	-0.3
163,217	+		Psyr_0150	0.39	-0.1
163,218	-		Psyr_0150	0.39	-0.3
163,218	-		Psyr_0150	0.39	-1.6
163,218	-		Psyr_0150	0.39	+0.3
163,218	-		Psyr_0150	0.39	-0.1
163,227	+		Psyr_0150	0.40	-0.3
163,227	+		Psyr_0150	0.40	+0.5
163,227	+		Psyr_0150	0.40	-0.6
163,457	+		Psyr_0150	0.60	-0.1
163,458	-		Psyr_0150	0.60	-0.2
163,458	-		Psyr_0150	0.60	+0.7
163,629	+		Psyr_0150	0.75	-0.6
163,629	+		Psyr_0150	0.75	-0.6
163,630	-		Psyr_0150	0.75	-1.1
163,630	-		Psyr_0150	0.75	+0.4
163,630	-		Psyr_0150	0.75	-1.6
163,630	-		Psyr_0150	0.75	+0.3