Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1223

Experiment: nitrogen source Ammonium chloride 20mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrogen source Ammonium chloride 20mM
1,386,426	+				+0.6
1,386,426	+				-0.8
1,386,427	-				-0.1
1,386,427	-				-0.6
1,386,501	+		Pf1N1B4_1222	0.16	+0.8
1,386,501	+		Pf1N1B4_1222	0.16	+0.2
1,386,501	+		Pf1N1B4_1222	0.16	-0.2
1,386,502	-				-1.5
1,386,502	-		Pf1N1B4_1222	0.16	+0.4
1,386,502	-		Pf1N1B4_1222	0.16	-2.3
1,386,657	+		Pf1N1B4_1222	0.33	-0.3
1,386,657	+		Pf1N1B4_1222	0.33	-0.6
1,386,741	+		Pf1N1B4_1222	0.42	-0.2
1,386,742	-		Pf1N1B4_1222	0.42	+1.4
1,386,742	-		Pf1N1B4_1222	0.42	+0.2
1,386,747	+		Pf1N1B4_1222	0.43	-1.6
1,386,747	+		Pf1N1B4_1222	0.43	+1.4
1,386,747	+		Pf1N1B4_1222	0.43	+0.3
1,386,747	+		Pf1N1B4_1222	0.43	-0.7
1,386,747	+		Pf1N1B4_1222	0.43	-1.4
1,386,747	+		Pf1N1B4_1222	0.43	-0.9
1,386,747	+		Pf1N1B4_1222	0.43	-0.1
1,386,748	-		Pf1N1B4_1222	0.43	-1.4
1,386,748	-		Pf1N1B4_1222	0.43	+1.6
1,386,748	-		Pf1N1B4_1222	0.43	+0.2
1,386,748	-		Pf1N1B4_1222	0.43	+0.5
1,386,748	-		Pf1N1B4_1222	0.43	-0.6
1,386,748	-		Pf1N1B4_1222	0.43	+0.1
1,386,748	-		Pf1N1B4_1222	0.43	+0.1
1,386,861	+		Pf1N1B4_1222	0.55	+0.1
1,386,862	-		Pf1N1B4_1222	0.55	-0.5
1,386,862	-		Pf1N1B4_1222	0.55	-1.7
1,386,862	-		Pf1N1B4_1222	0.55	-0.7
1,386,862	-		Pf1N1B4_1222	0.55	-1.2
1,386,864	+		Pf1N1B4_1222	0.55	-1.7
1,386,962	+		Pf1N1B4_1222	0.66	+0.9
1,386,962	+		Pf1N1B4_1222	0.66	+0.1
1,386,962	+		Pf1N1B4_1222	0.66	+0.3
1,386,962	+		Pf1N1B4_1222	0.66	+0.8
1,386,962	+		Pf1N1B4_1222	0.66	-0.0
1,386,962	+				+1.8
1,386,962	+		Pf1N1B4_1222	0.66	+0.8
1,386,962	+		Pf1N1B4_1222	0.66	-0.7
1,386,962	+		Pf1N1B4_1222	0.66	-1.3
1,386,962	+		Pf1N1B4_1222	0.66	-0.4
1,386,962	+		Pf1N1B4_1222	0.66	-0.9
1,386,962	+		Pf1N1B4_1222	0.66	-0.1
1,386,962	+		Pf1N1B4_1222	0.66	+0.1
1,386,962	+		Pf1N1B4_1222	0.66	+0.6
1,386,963	-		Pf1N1B4_1222	0.66	+1.7
1,386,963	-		Pf1N1B4_1222	0.66	+0.1
1,386,963	-		Pf1N1B4_1222	0.66	+1.8
1,386,963	-		Pf1N1B4_1222	0.66	+0.3
1,386,963	-		Pf1N1B4_1222	0.66	-1.3
1,386,963	-		Pf1N1B4_1222	0.66	-1.3
1,386,963	-		Pf1N1B4_1222	0.66	+0.1
1,386,963	-				-1.1
1,386,963	-		Pf1N1B4_1222	0.66	+0.8
1,386,963	-		Pf1N1B4_1222	0.66	+1.0
1,386,963	-		Pf1N1B4_1222	0.66	+2.2
1,386,963	-		Pf1N1B4_1222	0.66	-0.5
1,386,963	-		Pf1N1B4_1222	0.66	-0.1
1,386,963	-		Pf1N1B4_1222	0.66	-0.2
1,386,963	-		Pf1N1B4_1222	0.66	+1.0
1,386,963	-		Pf1N1B4_1222	0.66	-1.5
1,386,963	-		Pf1N1B4_1222	0.66	-0.4
1,386,963	-		Pf1N1B4_1222	0.66	-0.0
1,386,963	-		Pf1N1B4_1222	0.66	+0.3
1,387,162	-		Pf1N1B4_1222	0.88	-0.1
1,387,164	+		Pf1N1B4_1222	0.88	+0.3
1,387,164	+		Pf1N1B4_1222	0.88	+0.6
1,387,164	+		Pf1N1B4_1222	0.88	+0.6
1,387,164	+		Pf1N1B4_1222	0.88	+0.2
1,387,165	-		Pf1N1B4_1222	0.88	+1.0
1,387,165	-		Pf1N1B4_1222	0.88	-0.1
1,387,165	-		Pf1N1B4_1222	0.88	-0.7
1,387,165	-		Pf1N1B4_1222	0.88	+1.2
1,387,165	-		Pf1N1B4_1222	0.88	-0.5
1,387,165	-		Pf1N1B4_1222	0.88	+2.1
1,387,165	-		Pf1N1B4_1222	0.88	+1.0
1,387,253	+				-0.5
1,387,266	+				-2.6
1,387,266	+				-1.6
1,387,266	+				+1.3
1,387,441	-				+0.1
1,387,530	+		Pf1N1B4_1223	0.17	-1.9
1,387,686	+		Pf1N1B4_1223	0.31	+0.1
1,387,686	+		Pf1N1B4_1223	0.31	-0.1
1,387,686	+		Pf1N1B4_1223	0.31	-1.2
1,387,686	+		Pf1N1B4_1223	0.31	+1.6
1,387,686	+		Pf1N1B4_1223	0.31	+0.8
1,387,686	+		Pf1N1B4_1223	0.31	-0.9
1,387,686	+		Pf1N1B4_1223	0.31	-1.1
1,387,686	+		Pf1N1B4_1223	0.31	+1.9
1,387,687	-		Pf1N1B4_1223	0.31	+1.1
1,387,687	-		Pf1N1B4_1223	0.31	-1.1
1,387,687	-		Pf1N1B4_1223	0.31	+0.5
1,387,687	-		Pf1N1B4_1223	0.31	+3.0
1,387,687	-		Pf1N1B4_1223	0.31	-0.1
1,387,687	-		Pf1N1B4_1223	0.31	+0.6
1,387,687	-		Pf1N1B4_1223	0.31	+1.1
1,387,722	+		Pf1N1B4_1223	0.35	-0.3
1,387,722	+		Pf1N1B4_1223	0.35	-0.6
1,387,722	+		Pf1N1B4_1223	0.35	-0.8
1,387,722	+		Pf1N1B4_1223	0.35	+0.3
1,387,722	+		Pf1N1B4_1223	0.35	-1.1
1,387,723	-		Pf1N1B4_1223	0.35	-0.1
1,387,723	-		Pf1N1B4_1223	0.35	-0.7
1,387,723	-		Pf1N1B4_1223	0.35	-0.1
1,387,723	-		Pf1N1B4_1223	0.35	-0.3
1,387,783	-		Pf1N1B4_1223	0.40	+0.8
1,387,783	-		Pf1N1B4_1223	0.40	-1.6
1,387,861	-		Pf1N1B4_1223	0.48	-0.4
1,387,881	-		Pf1N1B4_1223	0.49	-0.6
1,387,971	+		Pf1N1B4_1223	0.58	-1.2
1,387,972	-		Pf1N1B4_1223	0.58	+0.1
1,387,972	-		Pf1N1B4_1223	0.58	+0.3
1,388,019	+		Pf1N1B4_1223	0.62	-0.0
1,388,019	+		Pf1N1B4_1223	0.62	-0.0
1,388,115	+		Pf1N1B4_1223	0.71	+1.3
1,388,116	-		Pf1N1B4_1223	0.71	-0.4
1,388,116	-		Pf1N1B4_1223	0.71	-1.3
1,388,116	-		Pf1N1B4_1223	0.71	-0.8
1,388,128	+		Pf1N1B4_1223	0.72	-1.8
1,388,336	+				+0.1
1,388,336	+				+0.5
1,388,337	-				-0.4
1,388,337	-				+1.3
1,388,374	-				-3.0
1,388,660	+				+0.4
1,388,660	+				-1.4
1,388,660	+				-1.7
1,388,660	+				-0.3
1,388,660	+				+0.4
1,388,660	+				-1.9
1,388,661	-				-0.5
1,388,661	-				+0.1
1,388,661	-				-0.2
1,388,661	-				+0.8
1,388,661	-				+0.7
1,388,661	-				+1.8
1,388,661	-				+0.3
1,388,684	+				+0.4
1,388,684	+				-1.2
1,388,684	+				-0.2
1,388,684	+				+1.1
1,388,684	+				-0.2
1,388,685	-				-0.0
1,388,685	-				-0.1
1,388,705	+				-1.1
1,388,705	+				+0.5
1,388,705	+				-0.7
1,388,705	+				-1.5
1,388,705	+				+0.9
1,388,705	+				-2.0
1,388,705	+				-1.4
1,388,705	+				-2.2
1,388,706	-				-1.5
1,388,706	-				-0.7
1,388,706	-				-2.4
1,388,706	-				+1.4
1,388,706	-				+0.4
1,388,706	-				-1.6
1,388,706	-				-1.7
1,388,706	-				+1.2
1,388,706	-				-0.4
1,388,706	-				+0.4
1,388,706	-				-0.3
1,388,706	-				+0.7
1,388,706	-				-1.2
1,388,706	-				+1.3
1,388,706	-				+2.1
1,388,706	-				+2.3
1,388,706	-				+0.8
1,388,706	-				-0.9
1,388,706	-				-0.7
1,388,706	-				-1.8
1,388,706	-				-1.9
1,388,706	-				+0.4
1,388,706	-				-0.6
1,388,706	-				-0.1
1,388,706	-				+0.4
1,388,710	-				-1.2
1,388,815	-		Pf1N1B4_1224	0.15	-0.4
1,388,847	-		Pf1N1B4_1224	0.16	-0.0
1,389,012	-		Pf1N1B4_1224	0.24	-1.1
1,389,063	-		Pf1N1B4_1224	0.26	-0.6
1,389,128	+		Pf1N1B4_1224	0.29	-1.0
1,389,128	+		Pf1N1B4_1224	0.29	+0.4
1,389,128	+		Pf1N1B4_1224	0.29	+0.7
1,389,129	-		Pf1N1B4_1224	0.29	-0.2
1,389,139	+		Pf1N1B4_1224	0.30	-1.5
1,389,139	+		Pf1N1B4_1224	0.30	+1.7
1,389,139	+		Pf1N1B4_1224	0.30	+0.6
1,389,139	+		Pf1N1B4_1224	0.30	+0.6
1,389,140	-		Pf1N1B4_1224	0.30	-0.0
1,389,140	-		Pf1N1B4_1224	0.30	-1.7
1,389,140	-		Pf1N1B4_1224	0.30	+2.0
1,389,140	-		Pf1N1B4_1224	0.30	+0.3
1,389,140	-		Pf1N1B4_1224	0.30	-0.1
1,389,345	+		Pf1N1B4_1224	0.39	-1.0
1,389,345	+		Pf1N1B4_1224	0.39	+0.5
1,389,345	+		Pf1N1B4_1224	0.39	-0.7
1,389,345	+		Pf1N1B4_1224	0.39	+1.0
1,389,345	+		Pf1N1B4_1224	0.39	-0.7
1,389,346	-		Pf1N1B4_1224	0.39	-0.8
1,389,346	-		Pf1N1B4_1224	0.39	-2.1
1,389,346	-				+1.6
1,389,346	-		Pf1N1B4_1224	0.39	-0.1