Experiment: KB with Methyl-2-Hydroxy-Phenylproprionate 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4791 and Psyr_4792 are separated by 83 nucleotides Psyr_4792 and Psyr_4793 are separated by 258 nucleotides
Psyr_4791: Psyr_4791 - D-erythrose-4-phosphate dehydrogenase, at 5,678,341 to 5,679,384
_4791
Psyr_4792: Psyr_4792 - transketolase, at 5,679,468 to 5,681,465
_4792
Psyr_4793: Psyr_4793 - transcriptional regulator, ArsR family, at 5,681,724 to 5,682,719
_4793
Position (kb) 5679
5680
5681
5682 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 5678.623 kb on - strand, within Psyr_4791 at 5678.623 kb on - strand, within Psyr_4791 at 5679.174 kb on - strand, within Psyr_4791 at 5679.366 kb on - strand at 5679.366 kb on - strand at 5679.462 kb on - strand at 5679.462 kb on - strand at 5679.462 kb on - strand at 5679.462 kb on - strand at 5679.462 kb on - strand at 5679.462 kb on - strand at 5679.462 kb on - strand at 5679.462 kb on - strand at 5679.462 kb on - strand at 5681.485 kb on - strand at 5681.492 kb on - strand at 5681.492 kb on - strand at 5681.550 kb on - strand at 5681.560 kb on - strand at 5681.586 kb on + strand at 5681.586 kb on + strand at 5681.586 kb on + strand at 5681.586 kb on + strand at 5681.587 kb on - strand at 5681.587 kb on - strand at 5681.587 kb on - strand at 5681.710 kb on + strand at 5681.710 kb on + strand at 5681.710 kb on + strand at 5681.723 kb on + strand at 5681.723 kb on + strand at 5681.723 kb on + strand at 5681.723 kb on + strand at 5681.723 kb on + strand at 5681.723 kb on + strand at 5681.723 kb on + strand at 5681.737 kb on + strand at 5681.737 kb on + strand at 5682.055 kb on + strand, within Psyr_4793 at 5682.055 kb on + strand, within Psyr_4793 at 5682.055 kb on + strand, within Psyr_4793 at 5682.055 kb on + strand, within Psyr_4793 at 5682.055 kb on + strand, within Psyr_4793 at 5682.055 kb on + strand, within Psyr_4793 at 5682.171 kb on + strand, within Psyr_4793 at 5682.171 kb on + strand, within Psyr_4793 at 5682.238 kb on + strand, within Psyr_4793 at 5682.238 kb on + strand, within Psyr_4793
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Methyl-2-Hydroxy-Phenylproprionate 10 mM remove 5,678,623 - Psyr_4791 0.27 -2.0 5,678,623 - Psyr_4791 0.27 -0.4 5,679,174 - Psyr_4791 0.80 +1.2 5,679,366 - +0.2 5,679,366 - -0.4 5,679,462 - -0.6 5,679,462 - +0.2 5,679,462 - -1.0 5,679,462 - +0.0 5,679,462 - -1.9 5,679,462 - -0.4 5,679,462 - -0.4 5,679,462 - -0.3 5,679,462 - +0.0 5,681,485 - +0.2 5,681,492 - -0.0 5,681,492 - -1.1 5,681,550 - +0.9 5,681,560 - -1.6 5,681,586 + +0.5 5,681,586 + +0.7 5,681,586 + -0.4 5,681,586 + +0.5 5,681,587 - +0.7 5,681,587 - -0.8 5,681,587 - +0.0 5,681,710 + -0.8 5,681,710 + +0.7 5,681,710 + -0.3 5,681,723 + -0.4 5,681,723 + +2.8 5,681,723 + -0.4 5,681,723 + -2.3 5,681,723 + +0.1 5,681,723 + +0.2 5,681,723 + -0.2 5,681,737 + -0.3 5,681,737 + +0.1 5,682,055 + Psyr_4793 0.33 -0.5 5,682,055 + Psyr_4793 0.33 -0.8 5,682,055 + Psyr_4793 0.33 -1.3 5,682,055 + Psyr_4793 0.33 -0.3 5,682,055 + Psyr_4793 0.33 -1.0 5,682,055 + Psyr_4793 0.33 +0.4 5,682,171 + Psyr_4793 0.45 +0.2 5,682,171 + Psyr_4793 0.45 +0.1 5,682,238 + Psyr_4793 0.52 -0.4 5,682,238 + Psyr_4793 0.52 -0.6
Or see this region's nucleotide sequence