Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2503

Experiment: nitrogen source nitrite 0.5mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrogen source nitrite 0.5mM
2,837,658	+		Pf1N1B4_2502	0.36	-2.3
2,837,658	+		Pf1N1B4_2502	0.36	+1.4
2,837,658	+		Pf1N1B4_2502	0.36	+0.1
2,837,658	+		Pf1N1B4_2502	0.36	+0.1
2,837,658	+		Pf1N1B4_2502	0.36	-2.4
2,837,658	+		Pf1N1B4_2502	0.36	+1.5
2,837,658	+		Pf1N1B4_2502	0.36	-1.1
2,837,659	-		Pf1N1B4_2502	0.36	-1.3
2,837,659	-		Pf1N1B4_2502	0.36	-1.1
2,837,659	-		Pf1N1B4_2502	0.36	-3.0
2,837,659	-		Pf1N1B4_2502	0.36	-2.5
2,837,659	-		Pf1N1B4_2502	0.36	-0.8
2,837,659	-		Pf1N1B4_2502	0.36	-0.7
2,837,659	-		Pf1N1B4_2502	0.36	+1.1
2,837,659	-		Pf1N1B4_2502	0.36	-0.4
2,837,659	-		Pf1N1B4_2502	0.36	-1.0
2,837,668	+		Pf1N1B4_2502	0.37	-0.9
2,837,828	-		Pf1N1B4_2502	0.54	+0.5
2,838,227	+				-1.5
2,838,227	+				-0.4
2,838,228	-				+0.6
2,838,228	-				-1.5
2,838,228	-				-1.8
2,838,273	-				+2.4
2,838,313	+				-0.0
2,838,314	-				-1.3
2,838,345	+				-1.4
2,838,345	+				-1.2
2,838,345	+				-1.7
2,838,345	+				-1.7
2,838,346	-				-0.0
2,838,346	-				-0.7
2,838,346	-				-0.9
2,838,346	-				-1.4
2,838,346	-				+1.8
2,838,346	-				-1.3
2,838,346	-				-0.9
2,838,346	-				-3.3
2,838,346	-				-1.5
2,838,346	-				-0.7
2,838,381	+				-0.7
2,838,381	+				-1.4
2,838,381	+				-2.6
2,838,381	+				-0.6
2,838,382	-				-1.3
2,838,382	-				+1.0
2,838,382	-				-0.6
2,838,382	-				-0.7
2,838,382	-				-2.9
2,838,382	-				-1.5
2,838,382	-				-1.3
2,838,403	+				-2.3
2,838,403	+				-0.6
2,838,404	-				-1.0
2,838,404	-				-1.2
2,838,404	-				+2.6
2,838,404	-				+0.2
2,838,404	-				-1.0
2,838,404	-				-2.1
2,838,404	-				-0.8
2,838,404	-				-2.1
2,838,404	-				+0.2
2,838,404	-				+0.1
2,838,404	-				-1.0
2,838,441	+				-1.9
2,838,441	+				+1.6
2,838,441	+				-1.8
2,838,441	+				-1.9
2,838,441	+				-0.9
2,838,441	+				-0.2
2,838,441	+				+1.0
2,838,441	+				-2.7
2,838,441	+				-1.0
2,838,441	+				+0.3
2,838,442	-				+0.6
2,838,442	-				-0.7
2,838,442	-				+0.4
2,838,442	-				+0.2
2,838,442	-				+0.9
2,838,442	-				-1.0
2,838,442	-				+0.3
2,838,442	-				+1.0
2,838,442	-				-1.4
2,838,442	-				-0.7
2,838,442	-				+0.3
2,838,442	-				+0.2
2,838,443	+				-2.8
2,838,443	+				-2.4
2,838,443	+				-3.2
2,838,443	+				-0.1
2,838,443	+				-2.0
2,838,443	+				+0.4
2,838,443	+				+0.4
2,838,443	+				+0.0
2,838,443	+				-1.9
2,838,443	+				-0.5
2,838,443	+				-2.1
2,838,443	+				-2.9
2,838,443	+				-2.3
2,838,443	+				-1.6
2,838,443	+				-1.3
2,838,443	+				-1.7
2,838,443	+				+1.4
2,838,443	+				-0.5
2,838,443	+				-1.5
2,838,443	+				+1.0
2,838,443	+				-3.3
2,838,444	-				-0.8
2,838,444	-				+0.2
2,838,444	-				+2.4
2,838,444	-				-2.4
2,838,444	-				-1.2
2,838,444	-				-0.4
2,838,444	-				-0.7
2,838,444	-				-2.0
2,838,444	-				-2.9
2,838,444	-				-1.0
2,838,444	-				-0.9
2,838,444	-				-0.6
2,838,444	-				+0.3
2,838,444	-				-1.6
2,838,444	-				+1.6
2,838,444	-				+0.1
2,838,444	-				+1.6
2,838,444	-				+0.3
2,838,444	-				+0.3
2,838,444	-				+0.6
2,838,444	-				-0.5
2,838,444	-				-0.1
2,838,444	-				+0.8
2,838,444	-				+0.4
2,838,444	-				+0.8
2,838,447	+				+0.6
2,838,447	+				-3.1
2,838,447	+				+0.8
2,838,447	+				+0.8
2,838,447	+				-3.3
2,838,447	+				-2.0
2,838,447	+				-0.5
2,838,447	+				-2.1
2,838,447	+				-0.2
2,838,447	+				-0.7
2,838,447	+				-2.3
2,838,447	+				+0.2
2,838,447	+				-2.4
2,838,447	+				-1.5
2,838,447	+				-0.6
2,838,447	+				-0.8
2,838,447	+				-0.5
2,838,447	+				-0.6
2,838,447	+				-1.3
2,838,447	+				+0.8
2,838,447	+				-0.6
2,838,447	+				-1.4
2,838,447	+				-0.5
2,838,447	+				+0.4
2,838,447	+				+0.3
2,838,447	+				+0.5
2,838,447	+				-0.1
2,838,447	+				+0.8
2,838,447	+				+0.2
2,838,447	+				-0.0
2,838,447	+				+1.2
2,838,448	-				-0.4
2,838,448	-				-0.6
2,838,448	-				+1.4
2,838,448	-				+1.5
2,838,448	-				+1.8
2,838,448	-				+0.7
2,838,448	-				+0.2
2,838,448	-				-1.0
2,838,448	-				+0.2
2,838,448	-				-1.3
2,838,448	-				-1.9
2,838,448	-				+1.3
2,838,448	-				+1.4
2,838,448	-				+0.4
2,838,448	-				+1.0
2,838,448	-				-0.8
2,838,448	-				-0.9
2,838,448	-				+3.0
2,838,448	-				-0.8
2,838,448	-				+0.4
2,838,448	-				+0.1
2,838,448	-				+0.5
2,838,448	-				+0.9
2,838,448	-				+0.4
2,838,448	-				-0.7
2,838,448	-				-0.2
2,838,448	-				+0.1
2,838,448	-				-0.3
2,838,448	-				-0.9
2,838,448	-				+0.9
2,838,448	-				+0.9
2,838,448	-				+3.4
2,838,448	-				-0.8
2,838,448	-				-0.9
2,838,448	-				+1.0
2,838,449	+				-1.6
2,838,449	+				+0.1
2,838,449	+				-1.8
2,838,449	+				-0.3
2,838,449	+				-1.2
2,838,449	+				-0.9
2,838,449	+				-1.6
2,838,449	+				+0.1
2,838,449	+				-2.4
2,838,449	+				-1.6
2,838,450	-				-0.2
2,838,450	-				+0.2
2,838,450	-				-0.4
2,838,450	-				+2.0
2,838,450	-				-0.2
2,838,450	-				-1.7
2,838,450	-				-0.5
2,838,450	-				+0.1
2,838,478	+				+0.2
2,838,478	+				-0.2
2,838,478	+				-0.5
2,838,479	-				+0.7
2,838,479	-				+0.0
2,838,479	-				-0.3
2,838,479	-				+0.6
2,838,482	+				-0.5
2,838,482	+				-0.0
2,838,482	+				+0.3
2,838,482	+				-3.5
2,838,482	+				-1.2
2,838,483	-				+0.6
2,838,483	-				-0.2
2,838,483	-				-1.0
2,838,483	-				-1.4
2,838,483	-				+0.1
2,838,490	+				-2.4
2,838,490	+				-2.0
2,838,490	+				-1.3
2,838,491	-				-2.2
2,838,539	+				-1.4
2,838,539	+				-1.0
2,838,540	-				-2.3
2,838,540	-				-1.3
2,838,583	+				-1.3
2,838,884	+		Pf1N1B4_2503	0.13	-1.4
2,838,885	-		Pf1N1B4_2503	0.13	-0.2
2,838,953	+		Pf1N1B4_2503	0.16	+0.6
2,838,954	-		Pf1N1B4_2503	0.16	+0.2
2,838,972	+		Pf1N1B4_2503	0.17	+2.0
2,839,005	+		Pf1N1B4_2503	0.18	-0.4
2,839,190	-		Pf1N1B4_2503	0.26	+1.7
2,839,296	-		Pf1N1B4_2503	0.30	-0.2
2,839,313	+				-1.6
2,839,313	+		Pf1N1B4_2503	0.31	+0.2
2,839,313	+		Pf1N1B4_2503	0.31	-1.8
2,839,313	+		Pf1N1B4_2503	0.31	-3.7
2,839,313	+		Pf1N1B4_2503	0.31	-1.4
2,839,313	+		Pf1N1B4_2503	0.31	-2.3
2,839,313	+		Pf1N1B4_2503	0.31	-1.0
2,839,314	-		Pf1N1B4_2503	0.31	+0.5
2,839,314	-		Pf1N1B4_2503	0.31	+0.6
2,839,314	-		Pf1N1B4_2503	0.31	-0.8
2,839,314	-		Pf1N1B4_2503	0.31	+1.0
2,839,314	-		Pf1N1B4_2503	0.31	-0.9
2,839,314	-		Pf1N1B4_2503	0.31	-0.4
2,839,314	-		Pf1N1B4_2503	0.31	+0.0
2,839,603	-		Pf1N1B4_2503	0.43	-2.7
2,839,603	-		Pf1N1B4_2503	0.43	-3.7
2,839,953	+		Pf1N1B4_2503	0.57	-2.0
2,839,953	+		Pf1N1B4_2503	0.57	-2.0
2,839,953	+		Pf1N1B4_2503	0.57	-0.4
2,839,953	+		Pf1N1B4_2503	0.57	-0.8
2,839,954	-				-1.5
2,839,954	-		Pf1N1B4_2503	0.57	-1.4
2,839,954	-		Pf1N1B4_2503	0.57	-0.6
2,840,278	-		Pf1N1B4_2503	0.70	-1.5
2,840,278	-		Pf1N1B4_2503	0.70	+0.2
2,840,281	+		Pf1N1B4_2503	0.71	-0.3
2,840,281	+		Pf1N1B4_2503	0.71	-2.0
2,840,281	+		Pf1N1B4_2503	0.71	+0.2
2,840,281	+		Pf1N1B4_2503	0.71	-1.9
2,840,281	+		Pf1N1B4_2503	0.71	-0.5
2,840,281	+		Pf1N1B4_2503	0.71	-1.4
2,840,281	+		Pf1N1B4_2503	0.71	+0.5
2,840,281	+		Pf1N1B4_2503	0.71	-1.7
2,840,281	+		Pf1N1B4_2503	0.71	-3.2
2,840,281	+		Pf1N1B4_2503	0.71	-0.8
2,840,281	+		Pf1N1B4_2503	0.71	-1.5
2,840,281	+		Pf1N1B4_2503	0.71	-2.4
2,840,281	+		Pf1N1B4_2503	0.71	-0.4
2,840,281	+		Pf1N1B4_2503	0.71	-2.3
2,840,282	-		Pf1N1B4_2503	0.71	+0.3
2,840,282	-		Pf1N1B4_2503	0.71	+0.4
2,840,282	-		Pf1N1B4_2503	0.71	+0.5
2,840,282	-		Pf1N1B4_2503	0.71	-1.3
2,840,282	-		Pf1N1B4_2503	0.71	+0.0
2,840,298	-		Pf1N1B4_2503	0.71	-0.1
2,840,298	-		Pf1N1B4_2503	0.71	-0.6
2,840,298	-		Pf1N1B4_2503	0.71	-0.4
2,840,298	-		Pf1N1B4_2503	0.71	-0.9
2,840,344	+		Pf1N1B4_2503	0.73	-1.0
2,840,344	+		Pf1N1B4_2503	0.73	-2.2
2,840,344	+		Pf1N1B4_2503	0.73	-2.2
2,840,344	+		Pf1N1B4_2503	0.73	-2.0
2,840,344	+		Pf1N1B4_2503	0.73	-3.4
2,840,344	+		Pf1N1B4_2503	0.73	-0.0
2,840,344	+		Pf1N1B4_2503	0.73	+1.0
2,840,345	-		Pf1N1B4_2503	0.73	+1.4
2,840,345	-		Pf1N1B4_2503	0.73	-2.6
2,840,443	-		Pf1N1B4_2503	0.77	-0.1
2,840,547	+		Pf1N1B4_2503	0.81	-1.0
2,840,547	+				-0.8
2,840,547	+		Pf1N1B4_2503	0.81	-1.0
2,840,548	-		Pf1N1B4_2503	0.82	-1.4
2,840,644	+		Pf1N1B4_2503	0.85	-0.8
2,840,728	+		Pf1N1B4_2503	0.89	-1.9
2,840,728	+		Pf1N1B4_2503	0.89	-0.7
2,840,729	-		Pf1N1B4_2503	0.89	-1.2
2,840,775	+				-2.6
2,840,775	+				-0.0
2,840,776	-				-1.8
2,840,776	-				-1.0
2,840,776	-				-2.1
2,841,025	-				+0.5
2,841,060	-				+1.5
2,841,061	+				+0.2
2,841,062	-				-1.1
2,841,062	-				+3.5
2,841,062	-				-1.7
2,841,062	-				-0.4
2,841,087	-				-0.8
2,841,212	+		Pf1N1B4_2504	0.22	+1.1
2,841,239	+		Pf1N1B4_2504	0.25	+1.9
2,841,239	+		Pf1N1B4_2504	0.25	-0.1
2,841,240	-		Pf1N1B4_2504	0.26	+0.4
2,841,240	-		Pf1N1B4_2504	0.26	-0.0
2,841,240	-		Pf1N1B4_2504	0.26	+1.7
2,841,240	-		Pf1N1B4_2504	0.26	+1.2
2,841,248	+		Pf1N1B4_2504	0.27	+0.6
2,841,249	-		Pf1N1B4_2504	0.27	-0.0
2,841,257	+		Pf1N1B4_2504	0.28	+0.2
2,841,257	+		Pf1N1B4_2504	0.28	+1.1
2,841,258	-				-0.6
2,841,258	-		Pf1N1B4_2504	0.28	-1.5
2,841,258	-		Pf1N1B4_2504	0.28	-0.4
2,841,258	-		Pf1N1B4_2504	0.28	-0.0
2,841,258	-		Pf1N1B4_2504	0.28	+0.4
2,841,258	-		Pf1N1B4_2504	0.28	-1.8
2,841,258	-		Pf1N1B4_2504	0.28	+1.0
2,841,258	-		Pf1N1B4_2504	0.28	-0.7
2,841,509	+		Pf1N1B4_2504	0.59	+0.6
2,841,548	-		Pf1N1B4_2504	0.64	+0.5
2,841,557	+		Pf1N1B4_2504	0.65	-0.1
2,841,557	+		Pf1N1B4_2504	0.65	+0.3
2,841,557	+		Pf1N1B4_2504	0.65	+0.2
2,841,558	-		Pf1N1B4_2504	0.66	+0.4
2,841,558	-		Pf1N1B4_2504	0.66	+0.6
2,841,558	-		Pf1N1B4_2504	0.66	+0.5
2,841,558	-		Pf1N1B4_2504	0.66	-2.7
2,841,558	-		Pf1N1B4_2504	0.66	-0.1
2,841,558	-		Pf1N1B4_2504	0.66	-0.0
2,841,558	-		Pf1N1B4_2504	0.66	-1.6
2,841,558	-		Pf1N1B4_2504	0.66	-1.8
2,841,593	+		Pf1N1B4_2504	0.70	+0.2
2,841,594	-		Pf1N1B4_2504	0.70	+0.7
2,841,594	-		Pf1N1B4_2504	0.70	+0.5
2,841,699	-		Pf1N1B4_2504	0.83	+0.5
2,841,699	-		Pf1N1B4_2504	0.83	+0.2
2,841,781	-				-1.2
2,841,781	-				+0.5
2,841,845	+				-0.2
2,841,845	+				+0.2