Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2499

Experiment: nitrogen source nitrite 0.5mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrogen source nitrite 0.5mM
2,834,119	+		Pf1N1B4_2498	0.48	-0.4
2,834,119	+		Pf1N1B4_2498	0.48	-1.2
2,834,119	+		Pf1N1B4_2498	0.48	-0.8
2,834,119	+		Pf1N1B4_2498	0.48	-1.4
2,834,119	+		Pf1N1B4_2498	0.48	+0.9
2,834,120	-		Pf1N1B4_2498	0.48	+0.8
2,834,120	-		Pf1N1B4_2498	0.48	+0.2
2,834,120	-		Pf1N1B4_2498	0.48	-0.4
2,834,245	+		Pf1N1B4_2498	0.55	+0.4
2,834,245	+		Pf1N1B4_2498	0.55	-0.1
2,834,245	+				-0.4
2,834,245	+		Pf1N1B4_2498	0.55	+0.2
2,834,245	+		Pf1N1B4_2498	0.55	-2.2
2,834,246	-		Pf1N1B4_2498	0.55	+4.0
2,834,246	-		Pf1N1B4_2498	0.55	+0.2
2,834,246	-		Pf1N1B4_2498	0.55	-0.1
2,834,246	-		Pf1N1B4_2498	0.55	+0.1
2,834,246	-		Pf1N1B4_2498	0.55	-0.2
2,834,246	-		Pf1N1B4_2498	0.55	+0.4
2,834,593	+		Pf1N1B4_2498	0.74	-0.8
2,834,593	+		Pf1N1B4_2498	0.74	-0.8
2,834,594	-		Pf1N1B4_2498	0.74	+0.4
2,834,594	-		Pf1N1B4_2498	0.74	-3.0
2,834,851	+		Pf1N1B4_2498	0.88	+1.2
2,834,851	+		Pf1N1B4_2498	0.88	-0.7
2,834,851	+		Pf1N1B4_2498	0.88	-0.7
2,834,852	-		Pf1N1B4_2498	0.88	-0.9
2,834,982	+				-2.7
2,834,983	-				-0.9
2,834,983	-				+1.0
2,834,983	-				-2.3
2,834,983	-				+0.1
2,835,197	+		Pf1N1B4_2499	0.14	-1.7
2,835,197	+		Pf1N1B4_2499	0.14	-0.5
2,835,197	+		Pf1N1B4_2499	0.14	-3.0
2,835,197	+		Pf1N1B4_2499	0.14	-2.9
2,835,197	+		Pf1N1B4_2499	0.14	-0.0
2,835,197	+				-1.6
2,835,197	+		Pf1N1B4_2499	0.14	-0.7
2,835,197	+		Pf1N1B4_2499	0.14	-1.0
2,835,197	+		Pf1N1B4_2499	0.14	-0.8
2,835,197	+		Pf1N1B4_2499	0.14	-1.4
2,835,198	-		Pf1N1B4_2499	0.14	-1.2
2,835,198	-		Pf1N1B4_2499	0.14	-0.5
2,835,198	-		Pf1N1B4_2499	0.14	-2.1
2,835,198	-		Pf1N1B4_2499	0.14	-2.1
2,835,198	-		Pf1N1B4_2499	0.14	+0.6
2,835,198	-		Pf1N1B4_2499	0.14	-1.1
2,835,198	-		Pf1N1B4_2499	0.14	-1.6
2,835,198	-		Pf1N1B4_2499	0.14	-0.4
2,835,198	-		Pf1N1B4_2499	0.14	-3.1
2,835,198	-		Pf1N1B4_2499	0.14	-1.0
2,835,198	-		Pf1N1B4_2499	0.14	-0.3
2,835,198	-		Pf1N1B4_2499	0.14	-0.4
2,835,198	-		Pf1N1B4_2499	0.14	+0.7
2,835,198	-		Pf1N1B4_2499	0.14	-2.2
2,835,198	-		Pf1N1B4_2499	0.14	+0.5
2,835,198	-		Pf1N1B4_2499	0.14	-2.0
2,835,198	-		Pf1N1B4_2499	0.14	-0.4
2,835,198	-		Pf1N1B4_2499	0.14	-1.4
2,835,198	-		Pf1N1B4_2499	0.14	+0.2
2,835,455	+		Pf1N1B4_2499	0.37	-1.2
2,835,456	-		Pf1N1B4_2499	0.37	-2.6
2,835,458	+		Pf1N1B4_2499	0.37	+0.2
2,835,459	-		Pf1N1B4_2499	0.37	+1.2
2,835,459	-		Pf1N1B4_2499	0.37	-2.1
2,835,519	-		Pf1N1B4_2499	0.42	-0.8
2,835,558	+		Pf1N1B4_2499	0.46	-1.2
2,835,790	-		Pf1N1B4_2499	0.66	-0.5
2,835,904	-		Pf1N1B4_2499	0.76	+0.8
2,835,905	+		Pf1N1B4_2499	0.76	+0.6
2,835,906	-		Pf1N1B4_2499	0.76	-0.2
2,836,085	+				-2.7
2,836,085	+				+1.2
2,836,109	+				-1.4
2,836,110	-				+0.4
2,836,162	+				-2.2
2,836,172	-				-1.4
2,836,172	-				-1.4
2,836,402	-		Pf1N1B4_2500	0.80	-1.9
2,836,456	+				-3.5
2,836,456	+				-1.4
2,836,456	+				-2.7
2,836,456	+				-0.0
2,836,456	+				-0.0
2,836,456	+				-1.2
2,836,456	+				-1.7
2,836,457	-				-0.2
2,836,457	-				-3.2
2,836,457	-				+0.2
2,836,457	-				+0.4
2,836,470	+				-3.1
2,836,470	+				-2.8
2,836,471	-				-1.2
2,836,523	+				-2.1
2,836,611	+		Pf1N1B4_2501	0.21	-1.5
2,836,611	+		Pf1N1B4_2501	0.21	-2.7
2,836,611	+		Pf1N1B4_2501	0.21	-2.9
2,836,611	+		Pf1N1B4_2501	0.21	-0.6
2,836,612	-		Pf1N1B4_2501	0.21	-1.6
2,836,616	+		Pf1N1B4_2501	0.22	-1.3
2,836,616	+		Pf1N1B4_2501	0.22	-1.3
2,836,616	+		Pf1N1B4_2501	0.22	-0.5
2,836,616	+		Pf1N1B4_2501	0.22	-1.7
2,836,616	+		Pf1N1B4_2501	0.22	-0.7
2,836,617	-		Pf1N1B4_2501	0.22	+1.2
2,836,617	-		Pf1N1B4_2501	0.22	-1.4
2,836,617	-		Pf1N1B4_2501	0.22	-0.4
2,836,617	-		Pf1N1B4_2501	0.22	-1.2
2,836,617	-		Pf1N1B4_2501	0.22	-1.7
2,836,617	-		Pf1N1B4_2501	0.22	-2.0
2,836,617	-		Pf1N1B4_2501	0.22	-1.3
2,836,686	-		Pf1N1B4_2501	0.31	-0.5
2,836,686	-		Pf1N1B4_2501	0.31	-2.3
2,836,686	-		Pf1N1B4_2501	0.31	+0.7
2,836,686	-		Pf1N1B4_2501	0.31	+1.0
2,836,692	-		Pf1N1B4_2501	0.32	-2.2
2,836,826	+		Pf1N1B4_2501	0.50	-0.2
2,836,826	+		Pf1N1B4_2501	0.50	-0.5
2,836,826	+		Pf1N1B4_2501	0.50	-0.4
2,836,826	+		Pf1N1B4_2501	0.50	-1.4
2,836,826	+		Pf1N1B4_2501	0.50	-0.7
2,836,826	+		Pf1N1B4_2501	0.50	+1.7
2,836,827	-		Pf1N1B4_2501	0.50	-0.2
2,836,827	-		Pf1N1B4_2501	0.50	+0.2
2,836,827	-		Pf1N1B4_2501	0.50	+0.1
2,837,052	-		Pf1N1B4_2501	0.80	-1.7
2,837,054	+		Pf1N1B4_2501	0.80	-0.6
2,837,054	+		Pf1N1B4_2501	0.80	-1.7
2,837,055	-		Pf1N1B4_2501	0.80	-2.2
2,837,108	+		Pf1N1B4_2501	0.87	-3.2
2,837,108	+		Pf1N1B4_2501	0.87	-1.0
2,837,108	+		Pf1N1B4_2501	0.87	-1.8
2,837,108	+		Pf1N1B4_2501	0.87	-0.4
2,837,108	+		Pf1N1B4_2501	0.87	-0.4
2,837,108	+		Pf1N1B4_2501	0.87	-1.4
2,837,108	+		Pf1N1B4_2501	0.87	-1.3
2,837,108	+		Pf1N1B4_2501	0.87	-2.8
2,837,108	+		Pf1N1B4_2501	0.87	-1.4
2,837,108	+		Pf1N1B4_2501	0.87	-0.4
2,837,108	+		Pf1N1B4_2501	0.87	-4.0
2,837,108	+		Pf1N1B4_2501	0.87	+0.2
2,837,109	-		Pf1N1B4_2501	0.87	-3.4
2,837,109	-		Pf1N1B4_2501	0.87	-1.3
2,837,109	-		Pf1N1B4_2501	0.87	-1.4
2,837,109	-		Pf1N1B4_2501	0.87	-1.4
2,837,109	-		Pf1N1B4_2501	0.87	-0.8
2,837,109	-		Pf1N1B4_2501	0.87	-1.4
2,837,109	-		Pf1N1B4_2501	0.87	-2.8
2,837,109	-		Pf1N1B4_2501	0.87	-1.4
2,837,109	-		Pf1N1B4_2501	0.87	-1.5
2,837,109	-		Pf1N1B4_2501	0.87	-1.5
2,837,109	-		Pf1N1B4_2501	0.87	-1.4
2,837,109	-		Pf1N1B4_2501	0.87	-1.4
2,837,109	-		Pf1N1B4_2501	0.87	-0.6
2,837,109	-		Pf1N1B4_2501	0.87	-2.3
2,837,109	-		Pf1N1B4_2501	0.87	-0.3
2,837,109	-		Pf1N1B4_2501	0.87	-2.6
2,837,109	-		Pf1N1B4_2501	0.87	-2.7
2,837,123	+		Pf1N1B4_2501	0.89	-2.7
2,837,132	+				-0.8
2,837,132	+				-1.9
2,837,132	+				-0.8
2,837,132	+				-1.3
2,837,132	+				-0.7
2,837,132	+				-2.3
2,837,132	+				-0.8
2,837,132	+				+0.2
2,837,132	+				-0.8
2,837,132	+				+0.1
2,837,133	-				-1.5
2,837,133	-				-1.9
2,837,133	-				-1.2
2,837,133	-				-3.0
2,837,133	-				-2.6
2,837,133	-				-0.0
2,837,133	-				+0.8
2,837,133	-				-2.6
2,837,133	-				+0.0
2,837,133	-				-1.5
2,837,141	+				-2.7
2,837,141	+				-2.5
2,837,141	+				+0.2
2,837,141	+				-0.8
2,837,141	+				+2.0
2,837,141	+				-1.4
2,837,142	-				-2.5
2,837,142	-				-0.6
2,837,142	-				+0.4
2,837,142	-				-0.0
2,837,142	-				-2.6
2,837,142	-				-1.5
2,837,142	-				-1.5
2,837,144	+				-0.4
2,837,144	+				-1.9
2,837,144	+				+1.7
2,837,144	+				-3.1
2,837,145	-				-2.2
2,837,145	-				-2.6
2,837,145	-				-0.0
2,837,145	-				-2.5
2,837,145	-				-2.4