Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1024

Experiment: nitrogen source nitrite 0.5mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrogen source nitrite 0.5mM
1,158,380	+		Pf1N1B4_1022	0.71	-0.6
1,158,381	-		Pf1N1B4_1022	0.71	+0.1
1,158,381	-		Pf1N1B4_1022	0.71	-1.2
1,158,381	-		Pf1N1B4_1022	0.71	-0.4
1,158,398	+		Pf1N1B4_1022	0.73	-0.4
1,158,398	+		Pf1N1B4_1022	0.73	+0.6
1,158,398	+		Pf1N1B4_1022	0.73	+2.1
1,158,398	+		Pf1N1B4_1022	0.73	+0.1
1,158,398	+		Pf1N1B4_1022	0.73	-0.1
1,158,398	+		Pf1N1B4_1022	0.73	-0.5
1,158,398	+		Pf1N1B4_1022	0.73	+0.2
1,158,398	+		Pf1N1B4_1022	0.73	+0.7
1,158,399	-		Pf1N1B4_1022	0.73	-0.3
1,158,399	-		Pf1N1B4_1022	0.73	+2.3
1,158,399	-		Pf1N1B4_1022	0.73	-0.7
1,158,462	-		Pf1N1B4_1022	0.81	+0.4
1,158,462	-		Pf1N1B4_1022	0.81	-0.1
1,158,591	+				-1.4
1,158,592	-				+0.3
1,158,598	+				+0.5
1,158,599	-				-1.6
1,158,711	+				-1.9
1,158,711	+				-0.7
1,158,711	+				-0.8
1,158,711	+				-0.3
1,158,711	+				+1.4
1,158,711	+				+0.2
1,158,712	-				+2.0
1,158,717	+				-0.8
1,158,717	+				+0.6
1,158,717	+				-1.4
1,158,717	+				+0.7
1,158,717	+				+2.2
1,158,717	+				-0.4
1,158,717	+				+1.3
1,158,718	-				+0.5
1,158,718	-				-1.3
1,158,718	-				-0.8
1,158,718	-				+0.8
1,158,718	-				-0.7
1,158,718	-				-0.8
1,158,718	-				+1.4
1,158,832	+		Pf1N1B4_1023	0.16	-0.2
1,158,832	+		Pf1N1B4_1023	0.16	-0.0
1,158,833	-		Pf1N1B4_1023	0.17	-2.7
1,158,833	-		Pf1N1B4_1023	0.17	-0.4
1,158,833	-		Pf1N1B4_1023	0.17	+0.1
1,158,833	-		Pf1N1B4_1023	0.17	-0.5
1,158,833	-		Pf1N1B4_1023	0.17	-1.0
1,158,852	+		Pf1N1B4_1023	0.19	-3.2
1,158,852	+		Pf1N1B4_1023	0.19	-1.2
1,158,852	+		Pf1N1B4_1023	0.19	-0.1
1,158,853	-		Pf1N1B4_1023	0.20	-1.7
1,158,853	-		Pf1N1B4_1023	0.20	+0.7
1,158,853	-		Pf1N1B4_1023	0.20	-4.7
1,158,853	-		Pf1N1B4_1023	0.20	+0.6
1,158,870	+		Pf1N1B4_1023	0.22	-0.2
1,158,870	+		Pf1N1B4_1023	0.22	-2.6
1,158,870	+		Pf1N1B4_1023	0.22	-2.0
1,158,870	+		Pf1N1B4_1023	0.22	+1.3
1,158,871	-		Pf1N1B4_1023	0.22	-1.0
1,158,871	-		Pf1N1B4_1023	0.22	+0.7
1,158,871	-		Pf1N1B4_1023	0.22	-0.2
1,159,140	+		Pf1N1B4_1023	0.65	-2.7
1,159,141	-		Pf1N1B4_1023	0.65	+1.0
1,159,141	-		Pf1N1B4_1023	0.65	-0.1
1,159,227	+		Pf1N1B4_1023	0.78	-0.5
1,159,227	+		Pf1N1B4_1023	0.78	+0.4
1,159,228	-		Pf1N1B4_1023	0.79	-0.4
1,159,228	-		Pf1N1B4_1023	0.79	-0.2
1,159,287	+				-1.5
1,159,316	-				-1.7
1,159,316	-				-0.0
1,159,345	-				-1.4
1,159,345	-				+1.0
1,159,347	+				+2.2
1,159,347	+				+0.3
1,159,347	+				+0.6
1,159,347	+				-0.7
1,159,347	+				+1.5
1,159,347	+				+2.4
1,159,347	+				+1.1
1,159,347	+				-1.4
1,159,347	+				+0.2
1,159,347	+				+0.6
1,159,347	+				-1.5
1,159,348	-				+2.0
1,159,348	-				-0.2
1,159,348	-				-1.8
1,159,348	-				+1.0
1,159,348	-				-1.4
1,159,351	+				-1.4
1,159,351	+				-0.2
1,159,352	-				+0.1
1,159,352	-				-0.8
1,159,353	+				+0.1
1,159,353	+				+0.4
1,159,353	+				-0.9
1,159,353	+				+1.1
1,159,353	+				+0.1
1,159,354	-				-0.4
1,159,354	-				-1.7
1,159,354	-				+0.1
1,159,354	-				+0.4
1,159,354	-				-1.0
1,159,354	-				-0.4
1,159,354	-				+2.5
1,159,354	-				+0.4
1,159,378	-				-1.0
1,159,487	-				-3.1
1,159,662	+		Pf1N1B4_1024	0.22	+0.5
1,159,662	+		Pf1N1B4_1024	0.22	-2.2
1,159,662	+		Pf1N1B4_1024	0.22	-3.1
1,159,662	+		Pf1N1B4_1024	0.22	+0.3
1,159,663	-		Pf1N1B4_1024	0.22	-1.0
1,159,663	-		Pf1N1B4_1024	0.22	-1.4
1,160,199	+		Pf1N1B4_1024	0.63	-3.3
1,160,199	+		Pf1N1B4_1024	0.63	+2.7
1,160,199	+		Pf1N1B4_1024	0.63	+0.4
1,160,199	+		Pf1N1B4_1024	0.63	-1.7
1,160,200	-		Pf1N1B4_1024	0.63	-3.0
1,160,200	-		Pf1N1B4_1024	0.63	-1.6
1,160,200	-		Pf1N1B4_1024	0.63	-2.4
1,160,205	+		Pf1N1B4_1024	0.64	+0.4
1,160,205	+		Pf1N1B4_1024	0.64	-0.7
1,160,205	+		Pf1N1B4_1024	0.64	-3.3
1,160,205	+		Pf1N1B4_1024	0.64	-0.2
1,160,206	-		Pf1N1B4_1024	0.64	-2.3
1,160,274	+		Pf1N1B4_1024	0.69	-0.9
1,160,274	+		Pf1N1B4_1024	0.69	-1.1
1,160,274	+		Pf1N1B4_1024	0.69	-4.0
1,160,274	+		Pf1N1B4_1024	0.69	-0.6
1,160,542	+		Pf1N1B4_1024	0.89	-1.5
1,160,543	-		Pf1N1B4_1024	0.89	-0.3
1,160,657	-				-1.2
1,160,684	+				-1.4
1,160,735	+				-0.3
1,160,736	-				+0.6
1,160,736	-				+0.6
1,160,830	-		Pf1N1B4_1025	0.11	-0.5
1,160,948	+		Pf1N1B4_1025	0.20	+1.1
1,160,949	-		Pf1N1B4_1025	0.20	+0.8
1,160,949	-		Pf1N1B4_1025	0.20	+0.1
1,161,147	+		Pf1N1B4_1025	0.36	+0.2
1,161,167	+		Pf1N1B4_1025	0.37	+0.2
1,161,167	+		Pf1N1B4_1025	0.37	-0.4
1,161,167	+		Pf1N1B4_1025	0.37	-0.1
1,161,168	-		Pf1N1B4_1025	0.37	-0.2
1,161,168	-		Pf1N1B4_1025	0.37	+0.6
1,161,168	-		Pf1N1B4_1025	0.37	+1.8
1,161,238	+		Pf1N1B4_1025	0.43	-0.6
1,161,238	+		Pf1N1B4_1025	0.43	+0.4
1,161,239	-		Pf1N1B4_1025	0.43	+0.1
1,161,259	+		Pf1N1B4_1025	0.44	+0.6
1,161,259	+		Pf1N1B4_1025	0.44	-0.6
1,161,290	+		Pf1N1B4_1025	0.47	-1.6
1,161,291	-		Pf1N1B4_1025	0.47	+1.2
1,161,336	+		Pf1N1B4_1025	0.50	-0.2
1,161,395	+		Pf1N1B4_1025	0.55	+0.9
1,161,395	+		Pf1N1B4_1025	0.55	+0.7
1,161,395	+		Pf1N1B4_1025	0.55	-2.7
1,161,585	-		Pf1N1B4_1025	0.69	-0.2
1,161,588	+		Pf1N1B4_1025	0.69	+0.3
1,161,588	+		Pf1N1B4_1025	0.69	-0.1
1,161,588	+		Pf1N1B4_1025	0.69	-0.2
1,161,588	+		Pf1N1B4_1025	0.69	-0.2
1,161,588	+		Pf1N1B4_1025	0.69	+0.0
1,161,589	-		Pf1N1B4_1025	0.69	+0.7
1,161,589	-		Pf1N1B4_1025	0.69	+1.2
1,161,590	+		Pf1N1B4_1025	0.70	-0.7
1,161,590	+		Pf1N1B4_1025	0.70	-0.4
1,161,590	+		Pf1N1B4_1025	0.70	+0.7
1,161,590	+		Pf1N1B4_1025	0.70	-0.0
1,161,590	+		Pf1N1B4_1025	0.70	-0.5
1,161,590	+		Pf1N1B4_1025	0.70	+0.3
1,161,590	+		Pf1N1B4_1025	0.70	-1.3
1,161,590	+		Pf1N1B4_1025	0.70	+1.1
1,161,590	+		Pf1N1B4_1025	0.70	+0.4
1,161,590	+		Pf1N1B4_1025	0.70	+0.1
1,161,591	-		Pf1N1B4_1025	0.70	+1.3
1,161,591	-		Pf1N1B4_1025	0.70	+0.9
1,161,591	-		Pf1N1B4_1025	0.70	-0.2
1,161,591	-				-1.2
1,161,591	-		Pf1N1B4_1025	0.70	+0.9
1,161,594	+		Pf1N1B4_1025	0.70	-3.5
1,161,594	+		Pf1N1B4_1025	0.70	-0.3
1,161,594	+		Pf1N1B4_1025	0.70	+0.1
1,161,594	+		Pf1N1B4_1025	0.70	-0.3
1,161,595	-		Pf1N1B4_1025	0.70	-1.0
1,161,595	-		Pf1N1B4_1025	0.70	-1.3