Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS04790

Experiment: Sucrose (C) and Ammonium chloride (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sucrose (C) and Ammonium chloride (N); with TAPS
1,071,352	+				-2.9
1,071,352	+				+1.3
1,071,353	-				-0.5
1,071,353	-				-0.3
1,071,359	+				-2.0
1,071,365	+				+1.5
1,071,365	+				-1.0
1,071,366	-				+0.7
1,071,366	-				+1.9
1,071,375	+				-1.0
1,071,375	+				-1.3
1,071,376	-				+0.4
1,071,376	-				-1.4
1,071,378	+				+0.1
1,071,379	-				-0.9
1,071,379	-				-1.6
1,071,396	+				+1.0
1,071,396	+				+1.1
1,071,396	+				-0.9
1,071,411	+				+1.2
1,071,411	+				-0.5
1,071,536	+				-1.9
1,071,537	-				+2.0
1,071,729	+		PFLU_RS04785	0.26	+0.2
1,071,729	+		PFLU_RS04785	0.26	+0.6
1,071,729	+		PFLU_RS04785	0.26	+2.0
1,071,730	-		PFLU_RS04785	0.26	-1.4
1,071,730	-		PFLU_RS04785	0.26	+1.4
1,071,730	-		PFLU_RS04785	0.26	-0.5
1,071,730	-		PFLU_RS04785	0.26	-0.9
1,071,782	+		PFLU_RS04785	0.33	-1.1
1,071,782	+		PFLU_RS04785	0.33	+1.3
1,071,783	-		PFLU_RS04785	0.33	-0.4
1,071,854	-		PFLU_RS04785	0.43	+1.3
1,071,938	+		PFLU_RS04785	0.53	+0.8
1,071,939	-		PFLU_RS04785	0.54	-0.2
1,071,939	-		PFLU_RS04785	0.54	+1.0
1,072,197	+		PFLU_RS04785	0.87	-1.8
1,072,218	+		PFLU_RS04785	0.90	+0.5
1,072,218	+		PFLU_RS04785	0.90	-0.4
1,072,218	+		PFLU_RS04785	0.90	-0.1
1,072,218	+		PFLU_RS04785	0.90	-2.3
1,072,219	-		PFLU_RS04785	0.90	+0.5
1,072,219	-		PFLU_RS04785	0.90	-1.3
1,072,239	+				-1.1
1,072,239	+				+1.7
1,072,239	+				+1.3
1,072,239	+				+1.1
1,072,239	+				+1.4
1,072,239	+				+0.2
1,072,240	-				-0.3
1,072,240	-				+1.3
1,072,240	-				+0.1
1,072,240	-				-1.1
1,072,240	-				-1.8
1,072,240	-				-0.7
1,072,255	+				-1.4
1,072,255	+				+0.4
1,072,255	+				+1.7
1,072,277	-				-0.2
1,072,325	+				+0.0
1,072,359	+				-0.7
1,072,359	+				+0.0
1,072,359	+				-1.6
1,072,359	+				-1.6
1,072,359	+				-0.5
1,072,359	+				+0.8
1,072,359	+				-2.2
1,072,359	+				-2.1
1,072,359	+				+1.2
1,072,359	+				-1.7
1,072,359	+				-1.4
1,072,359	+				-0.4
1,072,359	+				-1.3
1,072,360	-				+0.1
1,072,360	-				-0.5
1,072,360	-				+1.0
1,072,360	-				-0.9
1,072,360	-				-0.2
1,072,360	-				-1.2
1,072,360	-				+0.2
1,072,360	-				-0.8
1,072,360	-				+0.6
1,072,360	-				-2.5
1,072,430	+		PFLU_RS04790	0.13	-0.4
1,072,430	+		PFLU_RS04790	0.13	-0.7
1,072,430	+		PFLU_RS04790	0.13	-1.2
1,072,431	-		PFLU_RS04790	0.13	+0.8
1,072,431	-		PFLU_RS04790	0.13	+0.9
1,072,515	+		PFLU_RS04790	0.25	-2.2
1,072,515	+		PFLU_RS04790	0.25	-0.2
1,072,516	-		PFLU_RS04790	0.25	+1.0
1,072,516	-		PFLU_RS04790	0.25	-1.5
1,072,516	-		PFLU_RS04790	0.25	+0.9
1,072,516	-		PFLU_RS04790	0.25	-2.1
1,072,516	-		PFLU_RS04790	0.25	-0.3
1,072,516	-		PFLU_RS04790	0.25	-0.9
1,072,522	+		PFLU_RS04790	0.26	-1.8
1,072,729	+		PFLU_RS04790	0.53	-1.0
1,072,729	+		PFLU_RS04790	0.53	-0.7
1,072,752	+		PFLU_RS04790	0.57	-1.0
1,072,753	-		PFLU_RS04790	0.57	-0.5
1,072,782	+		PFLU_RS04790	0.61	+1.0
1,072,782	+		PFLU_RS04790	0.61	-1.0
1,072,782	+		PFLU_RS04790	0.61	-1.5
1,072,782	+		PFLU_RS04790	0.61	-0.1
1,072,782	+		PFLU_RS04790	0.61	+1.0
1,072,782	+		PFLU_RS04790	0.61	+0.7
1,072,782	+		PFLU_RS04790	0.61	-1.0
1,072,782	+		PFLU_RS04790	0.61	-0.2
1,072,782	+		PFLU_RS04790	0.61	+0.5
1,072,782	+		PFLU_RS04790	0.61	-1.9
1,072,782	+		PFLU_RS04790	0.61	-1.4
1,072,782	+		PFLU_RS04790	0.61	+2.8
1,072,782	+		PFLU_RS04790	0.61	-2.2
1,072,782	+		PFLU_RS04790	0.61	-2.6
1,072,782	+		PFLU_RS04790	0.61	+0.4
1,072,783	-		PFLU_RS04790	0.61	+0.0
1,072,783	-		PFLU_RS04790	0.61	-0.8
1,072,783	-		PFLU_RS04790	0.61	+0.5
1,072,783	-		PFLU_RS04790	0.61	+0.1
1,072,783	-		PFLU_RS04790	0.61	+0.5
1,072,783	-		PFLU_RS04790	0.61	+0.2
1,072,783	-		PFLU_RS04790	0.61	-2.0
1,072,783	-		PFLU_RS04790	0.61	+0.6
1,072,783	-		PFLU_RS04790	0.61	-0.4
1,072,783	-		PFLU_RS04790	0.61	+0.1
1,072,783	-		PFLU_RS04790	0.61	+0.8
1,072,783	-		PFLU_RS04790	0.61	-0.3
1,072,783	-		PFLU_RS04790	0.61	-0.2
1,072,783	-		PFLU_RS04790	0.61	+2.1
1,072,783	-		PFLU_RS04790	0.61	+0.6
1,072,783	-		PFLU_RS04790	0.61	+1.5
1,072,783	-		PFLU_RS04790	0.61	+0.4
1,072,833	+		PFLU_RS04790	0.67	+0.9
1,072,833	+		PFLU_RS04790	0.67	-0.3
1,072,834	-		PFLU_RS04790	0.68	-2.2
1,072,834	-		PFLU_RS04790	0.68	-0.1
1,072,834	-		PFLU_RS04790	0.68	-0.0
1,072,834	-		PFLU_RS04790	0.68	+0.7
1,072,834	-		PFLU_RS04790	0.68	-0.6
1,073,068	+				-1.2
1,073,068	+				+0.8
1,073,069	-				-1.4
1,073,069	-				-0.3
1,073,094	+				-0.2
1,073,094	+				-0.2
1,073,094	+				+0.7
1,073,094	+				-1.5
1,073,095	-				+1.3
1,073,095	-				+1.8
1,073,095	-				+0.6
1,073,095	-				-1.7
1,073,130	+				-1.0
1,073,131	-				-1.4
1,073,131	-				-2.7
1,073,167	+				-0.2
1,073,167	+				-0.2
1,073,167	+				-1.3
1,073,167	+				-1.0
1,073,167	+				-1.0
1,073,167	+				+0.3
1,073,168	-				-0.3
1,073,168	-				-0.3
1,073,168	-				-1.4
1,073,169	+				+0.6
1,073,169	+				-1.6
1,073,169	+				-0.1
1,073,169	+				-1.3
1,073,169	+				-1.2
1,073,169	+				+0.1
1,073,170	-				-0.7
1,073,170	-				-1.8
1,073,235	+		PFLU_RS04795	0.11	-2.3
1,073,235	+		PFLU_RS04795	0.11	-1.3
1,073,235	+		PFLU_RS04795	0.11	+0.5
1,073,235	+		PFLU_RS04795	0.11	+1.2
1,073,235	+		PFLU_RS04795	0.11	-0.3
1,073,235	+		PFLU_RS04795	0.11	+0.2
1,073,235	+		PFLU_RS04795	0.11	+0.8
1,073,236	-		PFLU_RS04795	0.11	+0.8
1,073,236	-		PFLU_RS04795	0.11	+0.8
1,073,272	+		PFLU_RS04795	0.18	+0.3
1,073,272	+		PFLU_RS04795	0.18	-0.7
1,073,273	-		PFLU_RS04795	0.19	-1.3
1,073,283	+		PFLU_RS04795	0.21	-2.8
1,073,283	+		PFLU_RS04795	0.21	+0.9
1,073,283	+		PFLU_RS04795	0.21	-2.0
1,073,283	+		PFLU_RS04795	0.21	+2.3
1,073,283	+		PFLU_RS04795	0.21	-2.2
1,073,283	+		PFLU_RS04795	0.21	+0.3
1,073,284	-		PFLU_RS04795	0.21	+0.9
1,073,284	-		PFLU_RS04795	0.21	+0.4
1,073,284	-		PFLU_RS04795	0.21	+0.5
1,073,284	-		PFLU_RS04795	0.21	-1.3
1,073,284	-		PFLU_RS04795	0.21	+0.5
1,073,383	+		PFLU_RS04795	0.41	-1.7
1,073,383	+		PFLU_RS04795	0.41	-0.5
1,073,652	+				-0.1
1,073,652	+				-0.8
1,073,652	+				+1.2
1,073,652	+				+1.3
1,073,653	-				-0.4
1,073,653	-				+0.4
1,073,653	-				+0.4
1,073,653	-				+0.3
1,073,655	+				-0.3
1,073,655	+				+0.1
1,073,656	-				+0.5
1,073,656	-				+1.3
1,073,656	-				+0.3
1,073,820	+		PFLU_RS04800	0.17	+1.2
1,073,820	+		PFLU_RS04800	0.17	-0.4
1,073,820	+		PFLU_RS04800	0.17	-1.0
1,073,820	+		PFLU_RS04800	0.17	-0.9
1,073,820	+		PFLU_RS04800	0.17	-1.2
1,073,820	+		PFLU_RS04800	0.17	+0.4
1,073,820	+		PFLU_RS04800	0.17	-1.1
1,073,820	+		PFLU_RS04800	0.17	+0.4
1,073,820	+		PFLU_RS04800	0.17	+1.2
1,073,820	+		PFLU_RS04800	0.17	+2.6
1,073,820	+		PFLU_RS04800	0.17	-0.7
1,073,820	+		PFLU_RS04800	0.17	-1.3
1,073,820	+		PFLU_RS04800	0.17	-0.7
1,073,820	+		PFLU_RS04800	0.17	+3.3
1,073,820	+		PFLU_RS04800	0.17	-1.2
1,073,820	+		PFLU_RS04800	0.17	-0.0
1,073,820	+		PFLU_RS04800	0.17	+0.8
1,073,820	+		PFLU_RS04800	0.17	-2.1
1,073,820	+		PFLU_RS04800	0.17	-2.1
1,073,820	+		PFLU_RS04800	0.17	+0.3
1,073,820	+		PFLU_RS04800	0.17	-0.4
1,073,820	+		PFLU_RS04800	0.17	+0.0
1,073,820	+		PFLU_RS04800	0.17	-0.9
1,073,820	+		PFLU_RS04800	0.17	-0.6
1,073,820	+		PFLU_RS04800	0.17	-1.8
1,073,820	+		PFLU_RS04800	0.17	+0.6
1,073,820	+		PFLU_RS04800	0.17	-0.5
1,073,820	+		PFLU_RS04800	0.17	+0.1
1,073,820	+		PFLU_RS04800	0.17	+0.1
1,073,821	-		PFLU_RS04800	0.17	-0.7
1,073,821	-		PFLU_RS04800	0.17	+0.9
1,073,821	-		PFLU_RS04800	0.17	+1.1
1,073,821	-		PFLU_RS04800	0.17	+0.9
1,073,821	-		PFLU_RS04800	0.17	+0.1
1,073,821	-		PFLU_RS04800	0.17	+0.6
1,073,821	-		PFLU_RS04800	0.17	+0.0
1,073,821	-		PFLU_RS04800	0.17	-0.4
1,073,821	-		PFLU_RS04800	0.17	-0.1
1,073,821	-		PFLU_RS04800	0.17	+0.0
1,073,821	-		PFLU_RS04800	0.17	-0.3
1,073,821	-		PFLU_RS04800	0.17	-0.4
1,073,821	-		PFLU_RS04800	0.17	+0.3
1,073,821	-		PFLU_RS04800	0.17	-0.0
1,073,821	-		PFLU_RS04800	0.17	+1.1
1,073,821	-		PFLU_RS04800	0.17	-1.0
1,073,821	-		PFLU_RS04800	0.17	-2.0
1,073,821	-		PFLU_RS04800	0.17	+1.3
1,073,821	-		PFLU_RS04800	0.17	+0.0
1,073,821	-		PFLU_RS04800	0.17	-1.2
1,073,821	-		PFLU_RS04800	0.17	-1.2
1,073,821	-		PFLU_RS04800	0.17	+0.1
1,073,868	+		PFLU_RS04800	0.22	-1.3