Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4780

Experiment: BHIS with Lithocholic 0.4 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Lithocholic 0.4 mg/ml
6,258,109	+		BT4778	0.36	-1.2
6,258,109	+		BT4778	0.36	-2.7
6,258,314	+		BT4778	0.61	-1.2
6,258,394	-		BT4778	0.70	-0.7
6,258,549	+		BT4778	0.88	+1.1
6,258,597	-				-2.0
6,258,597	-				-0.5
6,258,695	-				-1.9
6,258,767	-		BT4779	0.26	-0.4
6,259,083	+				+0.4
6,259,083	+				-1.1
6,259,101	-				-1.8
6,259,113	-				-0.9
6,259,241	-		BT4780	0.19	-3.4
6,259,383	+		BT4780	0.35	-1.1
6,259,384	-		BT4780	0.35	-0.2
6,259,549	-		BT4780	0.53	-0.4
6,259,592	-		BT4780	0.58	-0.2
6,259,599	-		BT4780	0.59	-2.3
6,259,650	+		BT4780	0.65	-3.0
6,259,674	+		BT4780	0.67	+0.1
6,259,677	-		BT4780	0.68	-1.2
6,259,758	-		BT4780	0.77	+0.1
6,259,758	-		BT4780	0.77	-0.1
6,259,821	-		BT4780	0.84	-0.3
6,259,821	-		BT4780	0.84	-2.0
6,259,967	-				-2.0
6,259,978	+				+0.6
6,259,978	+				-0.9
6,259,979	-				-1.2
6,259,992	+				-0.9
6,260,176	-				-0.7
6,260,223	-				-0.9
6,260,289	+				-0.4